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The map label for this gene is ycgF [C]

Identifier: 120612276

GI number: 120612276

Start: 4003196

End: 4003618

Strand: Reverse

Name: ycgF [C]

Synonym: Aave_3630

Alternate gene names: 120612276

Gene position: 4003618-4003196 (Counterclockwise)

Preceding gene: 120612277

Following gene: 120612275

Centisome position: 74.8

GC content: 66.9

Gene sequence:

>423_bases
ATGCTCGTACGCCTGCTCTATGCGAGCCGCGCGGTGGATACCTCCAGCGCGGCCATCGAAGACATCCTGGCCCAGTCGCG
CCAGCACAACCCCGGCAGCGGCATCACCGGCGTGCTGTGCTATGGCGGCGGCGTGTTCCTGCAGGCCATCGAGGGCGGCC
GCTCCGCCGTGAACGAGCTCTACGGCCATATCCTGCGCGACCCCCGCCACAAGGACGTCGAGCTCCTGCACTTCGAGGAA
ATCGAGGAGCGCCGCTTCGGCGGCTGGACCATGGGCCAGGTGAACCTCGGCCGCATCAACCATTCGACCCTGCTGAAGTA
TTCCGAGAAGCCCGAACTGGATCCGTACCTGGTGTCCGGCCGGGTCTCCCTGGCGCTGCTGGAAGAGCTCATGGCCACGG
CGTCGGTCATCGGCCGCACCTGA

Upstream 100 bases:

>100_bases
ATGGACAGCAAAATGCTGAACTCGGTGATGCGCGGCGTGTTCCTGAAGGACGCCGCGCTGCGCCGCGAATTCCTCTCGCT
CATCCCCGGAAGGACCTGAC

Downstream 100 bases:

>100_bases
CGCGGCGCGCCTGCAGCCTCCCGGGCTGCCCGGCGCTTTCCGTTCTGCTGTCGCCCTGCCGCCGCAGGGCCCCGCATGCC
CCTTTCCGCCTTCGCGCTCA

Product: BLUF domain-containing protein

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD Family; Photopigment And Puc Activator; Sensors Of Blue-Light Using FAD; Bluf Domain Protein; Blue-Light Sensor BluF Domain; AppA Protein; Activator Of Photopigment And Puc Expression

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLVRLLYASRAVDTSSAAIEDILAQSRQHNPGSGITGVLCYGGGVFLQAIEGGRSAVNELYGHILRDPRHKDVELLHFEE
IEERRFGGWTMGQVNLGRINHSTLLKYSEKPELDPYLVSGRVSLALLEELMATASVIGRT

Sequences:

>Translated_140_residues
MLVRLLYASRAVDTSSAAIEDILAQSRQHNPGSGITGVLCYGGGVFLQAIEGGRSAVNELYGHILRDPRHKDVELLHFEE
IEERRFGGWTMGQVNLGRINHSTLLKYSEKPELDPYLVSGRVSLALLEELMATASVIGRT
>Mature_140_residues
MLVRLLYASRAVDTSSAAIEDILAQSRQHNPGSGITGVLCYGGGVFLQAIEGGRSAVNELYGHILRDPRHKDVELLHFEE
IEERRFGGWTMGQVNLGRINHSTLLKYSEKPELDPYLVSGRVSLALLEELMATASVIGRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15407; Mature: 15407

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRLLYASRAVDTSSAAIEDILAQSRQHNPGSGITGVLCYGGGVFLQAIEGGRSAVNEL
CEEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEHHCCHHHHHHH
YGHILRDPRHKDVELLHFEEIEERRFGGWTMGQVNLGRINHSTLLKYSEKPELDPYLVSG
HHHHHCCCCCCCEEEEHHHHHHHHHCCCEEECCEEECCCCHHHHEEECCCCCCCCEEECC
RVSLALLEELMATASVIGRT
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVRLLYASRAVDTSSAAIEDILAQSRQHNPGSGITGVLCYGGGVFLQAIEGGRSAVNEL
CEEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEHHCCHHHHHHH
YGHILRDPRHKDVELLHFEEIEERRFGGWTMGQVNLGRINHSTLLKYSEKPELDPYLVSG
HHHHHCCCCCCCEEEEHHHHHHHHHCCCEEECCEEECCCCHHHHEEECCCCCCCCEEECC
RVSLALLEELMATASVIGRT
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA