Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612235
Identifier: 120612235
GI number: 120612235
Start: 3958870
End: 3959148
Strand: Reverse
Name: 120612235
Synonym: Aave_3588
Alternate gene names: NA
Gene position: 3959148-3958870 (Counterclockwise)
Preceding gene: 120612237
Following gene: 120612234
Centisome position: 73.96
GC content: 61.29
Gene sequence:
>279_bases TTGATCGCAGAGGGTGCTGATCCTCTCGCGCAACGCCTCTTCGTCGAACGCCCGCAACGACAGCCTGGCCATTGGCCTGT AGCGATTGCGGTAGCCCTCGAAGAAGAAGCTCGCCCGAAATTCCCAAAGCCTGCAGGGCTCGCTCTGCAGGCTTTTTTCA TTCCTCCGAGGCACTCATGGCGTTGGTCGTGTAACGCCCGAGGCTGCAGGAAGACGCAGTTGGCGGCGCAAGCCGCGACC CATGCAAACGCGCTCACGCGCAACGAGGAGATGCCATGA
Upstream 100 bases:
>100_bases ACGCCGCCTTGCCAGCTTTATCGACGACTGCGTGCAGAGCGCCCTCCAATCCATGCACTCTGTCCTGGGCGGACGTGACG CCTGACCGTGATCGCATCAG
Downstream 100 bases:
>100_bases AAACCAAAACCACGGACGCTGAAAAGCACTTGAAGTTCGACGCGACGATCAGCGTGGGCACGATCTGCCAGTTGCTTGCG TTCATCGGATCGGTGGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIAEGADPLAQRLFVERPQRQPGHWPVAIAVALEEEARPKFPKPAGLALQAFFIPPRHSWRWSCNARGCRKTQLAAQAAT HANALTRNEEMP
Sequences:
>Translated_92_residues MIAEGADPLAQRLFVERPQRQPGHWPVAIAVALEEEARPKFPKPAGLALQAFFIPPRHSWRWSCNARGCRKTQLAAQAAT HANALTRNEEMP >Mature_92_residues MIAEGADPLAQRLFVERPQRQPGHWPVAIAVALEEEARPKFPKPAGLALQAFFIPPRHSWRWSCNARGCRKTQLAAQAAT HANALTRNEEMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10280; Mature: 10280
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEGADPLAQRLFVERPQRQPGHWPVAIAVALEEEARPKFPKPAGLALQAFFIPPRHSW CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCE RWSCNARGCRKTQLAAQAATHANALTRNEEMP EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIAEGADPLAQRLFVERPQRQPGHWPVAIAVALEEEARPKFPKPAGLALQAFFIPPRHSW CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCE RWSCNARGCRKTQLAAQAATHANALTRNEEMP EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA