Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612234
Identifier: 120612234
GI number: 120612234
Start: 3958562
End: 3958873
Strand: Reverse
Name: 120612234
Synonym: Aave_3587
Alternate gene names: NA
Gene position: 3958873-3958562 (Counterclockwise)
Preceding gene: 120612235
Following gene: 120612233
Centisome position: 73.96
GC content: 61.86
Gene sequence:
>312_bases ATGAAAACCAAAACCACGGACGCTGAAAAGCACTTGAAGTTCGACGCGACGATCAGCGTGGGCACGATCTGCCAGTTGCT TGCGTTCATCGGATCGGTGGCTCTGGCCTATGGCTCGTTCAGCGAAGAACGTGCCCGGCAGGACAGCCGCATCGCGCAGG CAGAGGTGGTGGCCGCAAGGGAGCGGGAGTCCGCGCGTGAGGACATCCGGGAGGTCAAGGCCCGTATGGAAACCTTGGAG CGGAGCCATCAGAACGCCAGGGAGTCCCTGGCAGCGCTGCAGTCATGCACCGGGGCAAGCTCTACCAGATAG
Upstream 100 bases:
>100_bases CATGGCGTTGGTCGTGTAACGCCCGAGGCTGCAGGAAGACGCAGTTGGCGGCGCAAGCCGCGACCCATGCAAACGCGCTC ACGCGCAACGAGGAGATGCC
Downstream 100 bases:
>100_bases AAAATTCCAGAAGTCTTCCGGCACGGTGAATTTCTGTACTACAATAGCGCTCTGCTTCTGATGCGACGGACTTGATCCAG ATGGTCAAAAAAGTTTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKTKTTDAEKHLKFDATISVGTICQLLAFIGSVALAYGSFSEERARQDSRIAQAEVVAARERESAREDIREVKARMETLE RSHQNARESLAALQSCTGASSTR
Sequences:
>Translated_103_residues MKTKTTDAEKHLKFDATISVGTICQLLAFIGSVALAYGSFSEERARQDSRIAQAEVVAARERESAREDIREVKARMETLE RSHQNARESLAALQSCTGASSTR >Mature_103_residues MKTKTTDAEKHLKFDATISVGTICQLLAFIGSVALAYGSFSEERARQDSRIAQAEVVAARERESAREDIREVKARMETLE RSHQNARESLAALQSCTGASSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11346; Mature: 11346
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKTTDAEKHLKFDATISVGTICQLLAFIGSVALAYGSFSEERARQDSRIAQAEVVAAR CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ERESAREDIREVKARMETLERSHQNARESLAALQSCTGASSTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTKTTDAEKHLKFDATISVGTICQLLAFIGSVALAYGSFSEERARQDSRIAQAEVVAAR CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ERESAREDIREVKARMETLERSHQNARESLAALQSCTGASSTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA