Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612192
Identifier: 120612192
GI number: 120612192
Start: 3916610
End: 3916915
Strand: Direct
Name: 120612192
Synonym: Aave_3544
Alternate gene names: NA
Gene position: 3916610-3916915 (Clockwise)
Preceding gene: 120612189
Following gene: 120612193
Centisome position: 73.17
GC content: 72.22
Gene sequence:
>306_bases ATGGCATCCTGCCCTACGGGGCGGCCTTCTGGTGCCAGCTGGCGGAGCGGTTCCCGCGGTGGGCCCGGACGCCATCCCGC CGCCGGTGGCCCGGGCTACTTCAGCCGCGGCTGCACGATGATCTTCACCGCCGACTCATTGTCGTGGATCCAGGGCATGG GCAAGGTGCGCGAGCGCCTGGTGGTCCTGCTGGACCTGGACCGCGCCTTTTCCGCGCAGGCCCTGGCTGAACTGGCCCGG CTGCCGGCCGATACGACCGAGCCCCGCCGACACTCCCACTGCCCGGCCACGCCCGCCCCGGAATGA
Upstream 100 bases:
>100_bases GTGCATCGCCAGGTCGAACCCCGGCCCGGGGCGCTCCTGCGCACCGGCAACGGCCCTGCGGAAGGCGGGCGCGGCCTGCA CAACCCCGGGTATGACTTCA
Downstream 100 bases:
>100_bases CCCCACCTGACCTGACCCCGCCCGGCACGTTCCCATCCGGGGAGGAGCCGCCCGCGGCCGCCTGTTCGATCCTCGTCGTG GACGACAGCGCGACGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MASCPTGRPSGASWRSGSRGGPGRHPAAGGPGYFSRGCTMIFTADSLSWIQGMGKVRERLVVLLDLDRAFSAQALAELAR LPADTTEPRRHSHCPATPAPE
Sequences:
>Translated_101_residues MASCPTGRPSGASWRSGSRGGPGRHPAAGGPGYFSRGCTMIFTADSLSWIQGMGKVRERLVVLLDLDRAFSAQALAELAR LPADTTEPRRHSHCPATPAPE >Mature_100_residues ASCPTGRPSGASWRSGSRGGPGRHPAAGGPGYFSRGCTMIFTADSLSWIQGMGKVRERLVVLLDLDRAFSAQALAELARL PADTTEPRRHSHCPATPAPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10675; Mature: 10544
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASCPTGRPSGASWRSGSRGGPGRHPAAGGPGYFSRGCTMIFTADSLSWIQGMGKVRERL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH VVLLDLDRAFSAQALAELARLPADTTEPRRHSHCPATPAPE HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASCPTGRPSGASWRSGSRGGPGRHPAAGGPGYFSRGCTMIFTADSLSWIQGMGKVRERL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH VVLLDLDRAFSAQALAELARLPADTTEPRRHSHCPATPAPE HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA