Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ycaK [C]
Identifier: 120612189
GI number: 120612189
Start: 3913738
End: 3914406
Strand: Direct
Name: ycaK [C]
Synonym: Aave_3540
Alternate gene names: 120612189
Gene position: 3913738-3914406 (Clockwise)
Preceding gene: 120612187
Following gene: 120612192
Centisome position: 73.12
GC content: 67.26
Gene sequence:
>669_bases ATGCACGCCCTCATCGTCGTCAGCCACCCCGATCCCCGGTCGCTCACCCATGCCGTCGCGCGCTCGTTTGCCGAGGGCGT CGAAGCGCCCGGCCAGCACACCACGGAGGTGGCGGACATTGCGGCAGAGGGGTTCCAGCCTGCATTCAACCCTGCGGACC GGGCCACGTTCTTCATGAAGGCGTCCGCCCCGCCCGACGTTCTGCGCGAGCAGGAGCGTATCGACCGGTCCGATGCGCTG GTGCTTGTCTATCCTGTTTACTGGTGGTCGTTTCCAGGGCAGCTCAAGGGCTGGATCGACCGCGTTTTCTCCAACGGGTG GGCCTACTCGCAAACGCCGGAAGGAGCCATCGAGAAGCGGCTCGGGCGTCTTGCGGTCCACCTGCTCGGCATCGGAGGTG CCGACGAGGGAACGTATGCGCGGCACGGCTACGACAAGGCGCTGCGCACGCAGGTCGATCACGGCATCTTCGACTACTGC GGCGCCAGGGTGGCCACTTCCACGATCCTCCATGGCACCGACGGCGCGAGCGCTGCATCCCACATCGCCACCGCGCGTGA ACTGGGTCGCAACGCGTTCGCGCGACAGGTCGCCGCAGGCGGGCACCCGGCGCCTGAAATCGGCGGCAAGTTCGGGCAGG GGGATCGCGGAGCAACGCTGGAGCAGTAA
Upstream 100 bases:
>100_bases CGTCCGGCTTCTTCGGATGGCTTGACATGGTTAACCTACCAAAAGTAGTTTGCAGTGCTAATATACGAATGGTAATTTAA CTTCGCCACAAGGATGTCCC
Downstream 100 bases:
>100_bases CGCCTCGGCCCCGGGCCTGCGGCGAGGCCCGGATCATTCCAACGGCAAGGTCAATTGGAAAACGGTGCCATGTTCGTCCG AGCGAACGACCGTCAATGTA
Product: NAD(P)H dehydrogenase (quinone)
Products: NAD+; NADP+; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MHALIVVSHPDPRSLTHAVARSFAEGVEAPGQHTTEVADIAAEGFQPAFNPADRATFFMKASAPPDVLREQERIDRSDAL VLVYPVYWWSFPGQLKGWIDRVFSNGWAYSQTPEGAIEKRLGRLAVHLLGIGGADEGTYARHGYDKALRTQVDHGIFDYC GARVATSTILHGTDGASAASHIATARELGRNAFARQVAAGGHPAPEIGGKFGQGDRGATLEQ
Sequences:
>Translated_222_residues MHALIVVSHPDPRSLTHAVARSFAEGVEAPGQHTTEVADIAAEGFQPAFNPADRATFFMKASAPPDVLREQERIDRSDAL VLVYPVYWWSFPGQLKGWIDRVFSNGWAYSQTPEGAIEKRLGRLAVHLLGIGGADEGTYARHGYDKALRTQVDHGIFDYC GARVATSTILHGTDGASAASHIATARELGRNAFARQVAAGGHPAPEIGGKFGQGDRGATLEQ >Mature_222_residues MHALIVVSHPDPRSLTHAVARSFAEGVEAPGQHTTEVADIAAEGFQPAFNPADRATFFMKASAPPDVLREQERIDRSDAL VLVYPVYWWSFPGQLKGWIDRVFSNGWAYSQTPEGAIEKRLGRLAVHLLGIGGADEGTYARHGYDKALRTQVDHGIFDYC GARVATSTILHGTDGASAASHIATARELGRNAFARQVAAGGHPAPEIGGKFGQGDRGATLEQ
Specific function: Unknown
COG id: COG2249
COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]
Homologues:
Organism=Homo sapiens, GI156564357, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1787129, Length=170, Percent_Identity=28.8235294117647, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003680 [H]
Pfam domain/function: PF02525 Flavodoxin_2 [H]
EC number: 1.6.99.2
Molecular weight: Translated: 23844; Mature: 23844
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHALIVVSHPDPRSLTHAVARSFAEGVEAPGQHTTEVADIAAEGFQPAFNPADRATFFMK CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEE ASAPPDVLREQERIDRSDALVLVYPVYWWSFPGQLKGWIDRVFSNGWAYSQTPEGAIEKR CCCCHHHHHHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH LGRLAVHLLGIGGADEGTYARHGYDKALRTQVDHGIFDYCGARVATSTILHGTDGASAAS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHH HIATARELGRNAFARQVAAGGHPAPEIGGKFGQGDRGATLEQ HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MHALIVVSHPDPRSLTHAVARSFAEGVEAPGQHTTEVADIAAEGFQPAFNPADRATFFMK CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEE ASAPPDVLREQERIDRSDALVLVYPVYWWSFPGQLKGWIDRVFSNGWAYSQTPEGAIEKR CCCCHHHHHHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH LGRLAVHLLGIGGADEGTYARHGYDKALRTQVDHGIFDYCGARVATSTILHGTDGASAAS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHH HIATARELGRNAFARQVAAGGHPAPEIGGKFGQGDRGATLEQ HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; NADPH; H+; acceptor
Specific reaction: NAD(P)H + H+ + acceptor = NAD(P)+ + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]