Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612187
Identifier: 120612187
GI number: 120612187
Start: 3911962
End: 3913008
Strand: Direct
Name: 120612187
Synonym: Aave_3538
Alternate gene names: NA
Gene position: 3911962-3913008 (Clockwise)
Preceding gene: 120612184
Following gene: 120612189
Centisome position: 73.08
GC content: 70.39
Gene sequence:
>1047_bases ATGAATGCTCTCGCCATGACCCGCCGCGCCGCGGCCTTTGCCCTGACCGCCTGCCTGGCCGCCTGCGGAGGCGGCGGCGG AGGAGACGCCTTCGGTGGCGGAGGAAATGGCGGCGGCGGTGGAGGCGTGGACGGCGGCGGAAACGGTGGCGGCGGTGGCG GCAATGGCGGGGGCGGCACCACTCCATCCCAGGTCACCGGCCAGTACATCGCCCAGCCCGCCGCCTCCGGCGCTGCGCTG CTGGCCGCCATGAACGACCAGGGCTCGCGCGGCTATGCCTACCTGTCGGCCATGGTGACGGGGGGCAGCGCGCAGAACGA CTTCTACGTGACCGACACCGCGCACGCCAGCTCGCGGCTGACCTATGAGACAGTGGCGCAGGCTAACTCGGGCGATGGTC TGGTGGCCCAGCTCAACCAGCAGGGCGCACGCGGCTTCGTCTTCAAGGGGCCCACCATGTCCGGCGACGGCCCGGGCATC AGCCTGCTCACGGTGCGCGACGCGACGCGCGGCGCCACCTATTCCTACGAACGGCAGGCCATCTCCGGCAGCCTGGGCAG CGATGCCTTCCAGGCCCAGCTGAACGCCGAGGGCGCACGGGGCTTCCGGCTGGTCGGCCCGATCGGCGCGGGCCAGGACA GCTTCAACCTCTACGCCAGGGACTCCAGCGCCACCACCTATTCCTACACCGTGATCGCCGTGTCCGGCTCCGGCGGCATG GCCAGCGGCGACGCGTTGCGCCAGCGGATGAACGAACAGGGCGCGCAGGGCGATTTCTACCTGGGCGCGTTCTCGCTGCA GGGTGGCGCCATCGGGCAGGTCTTCGAGAAGAGCTCGGCGCAGAACGGCGCCGTCGAATACGACCTGAGCGCCGTCAACC TGGAGCAGTCGGCGGACCAGAAGCTGGCCGCCATGAACCAGCGTGCCGCGCAAGGCTTCTTCTTCGTGAGCGACCTCTCG ACCGACGACGGCAGCACCTACACCCTGTCGGCGCGCAACGCGGCCAGCCTGCGCAGTCCGCTGGTCGGCGTCGCCTTCCC GAATTGA
Upstream 100 bases:
>100_bases TTTTCCCTTGCAACGGGCGTGCGGTCCGATGTGTCGCAACGAACGATGCAACAGGACGGGCTGCCGCCGGCCCCCCTTAC TCCGTAACCCAAGGATTTCC
Downstream 100 bases:
>100_bases GGCAATGCTGAAAAAGCCCCTCGCGCGCGGCGCGGTGCGGGGGGCTTATCCACCCCTGCGCGTGATCCGCCGGATCGCGT CGTAGATCTCCTCCTCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNALAMTRRAAAFALTACLAACGGGGGGDAFGGGGNGGGGGGVDGGGNGGGGGGNGGGGTTPSQVTGQYIAQPAASGAAL LAAMNDQGSRGYAYLSAMVTGGSAQNDFYVTDTAHASSRLTYETVAQANSGDGLVAQLNQQGARGFVFKGPTMSGDGPGI SLLTVRDATRGATYSYERQAISGSLGSDAFQAQLNAEGARGFRLVGPIGAGQDSFNLYARDSSATTYSYTVIAVSGSGGM ASGDALRQRMNEQGAQGDFYLGAFSLQGGAIGQVFEKSSAQNGAVEYDLSAVNLEQSADQKLAAMNQRAAQGFFFVSDLS TDDGSTYTLSARNAASLRSPLVGVAFPN
Sequences:
>Translated_348_residues MNALAMTRRAAAFALTACLAACGGGGGGDAFGGGGNGGGGGGVDGGGNGGGGGGNGGGGTTPSQVTGQYIAQPAASGAAL LAAMNDQGSRGYAYLSAMVTGGSAQNDFYVTDTAHASSRLTYETVAQANSGDGLVAQLNQQGARGFVFKGPTMSGDGPGI SLLTVRDATRGATYSYERQAISGSLGSDAFQAQLNAEGARGFRLVGPIGAGQDSFNLYARDSSATTYSYTVIAVSGSGGM ASGDALRQRMNEQGAQGDFYLGAFSLQGGAIGQVFEKSSAQNGAVEYDLSAVNLEQSADQKLAAMNQRAAQGFFFVSDLS TDDGSTYTLSARNAASLRSPLVGVAFPN >Mature_348_residues MNALAMTRRAAAFALTACLAACGGGGGGDAFGGGGNGGGGGGVDGGGNGGGGGGNGGGGTTPSQVTGQYIAQPAASGAAL LAAMNDQGSRGYAYLSAMVTGGSAQNDFYVTDTAHASSRLTYETVAQANSGDGLVAQLNQQGARGFVFKGPTMSGDGPGI SLLTVRDATRGATYSYERQAISGSLGSDAFQAQLNAEGARGFRLVGPIGAGQDSFNLYARDSSATTYSYTVIAVSGSGGM ASGDALRQRMNEQGAQGDFYLGAFSLQGGAIGQVFEKSSAQNGAVEYDLSAVNLEQSADQKLAAMNQRAAQGFFFVSDLS TDDGSTYTLSARNAASLRSPLVGVAFPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34600; Mature: 34600
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALAMTRRAAAFALTACLAACGGGGGGDAFGGGGNGGGGGGVDGGGNGGGGGGNGGGGT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPSQVTGQYIAQPAASGAALLAAMNDQGSRGYAYLSAMVTGGSAQNDFYVTDTAHASSRL CHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCC TYETVAQANSGDGLVAQLNQQGARGFVFKGPTMSGDGPGISLLTVRDATRGATYSYERQA CHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEHHHH ISGSLGSDAFQAQLNAEGARGFRLVGPIGAGQDSFNLYARDSSATTYSYTVIAVSGSGGM HCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCC ASGDALRQRMNEQGAQGDFYLGAFSLQGGAIGQVFEKSSAQNGAVEYDLSAVNLEQSADQ CCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEECCHHHHHH KLAAMNQRAAQGFFFVSDLSTDDGSTYTLSARNAASLRSPLVGVAFPN HHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCHHHHHCCEEEEECCC >Mature Secondary Structure MNALAMTRRAAAFALTACLAACGGGGGGDAFGGGGNGGGGGGVDGGGNGGGGGGNGGGGT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPSQVTGQYIAQPAASGAALLAAMNDQGSRGYAYLSAMVTGGSAQNDFYVTDTAHASSRL CHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCC TYETVAQANSGDGLVAQLNQQGARGFVFKGPTMSGDGPGISLLTVRDATRGATYSYERQA CHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEHHHH ISGSLGSDAFQAQLNAEGARGFRLVGPIGAGQDSFNLYARDSSATTYSYTVIAVSGSGGM HCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCC ASGDALRQRMNEQGAQGDFYLGAFSLQGGAIGQVFEKSSAQNGAVEYDLSAVNLEQSADQ CCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEECCHHHHHH KLAAMNQRAAQGFFFVSDLSTDDGSTYTLSARNAASLRSPLVGVAFPN HHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA