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The map label for this gene is bphP [H]

Identifier: 120612169

GI number: 120612169

Start: 3889795

End: 3890889

Strand: Direct

Name: bphP [H]

Synonym: Aave_3518

Alternate gene names: 120612169

Gene position: 3889795-3890889 (Clockwise)

Preceding gene: 120612168

Following gene: 120612172

Centisome position: 72.67

GC content: 64.2

Gene sequence:

>1095_bases
ATGCGACTTGCAGCCTTTTTGGAATCGACCCGGGAACGCATCCTGGAAGAGGCTGTCGCATACGCCAGAACCATTCCCGC
ACTGCGAAAAACCGACGACAAGGCACTGCGCGACCATTTGCCACAGATCCTGGAGGCCATTTCAGCAGACCTGCGGACCC
CGCAAACCAGGGCGCAGTCCATTCAAAAGTCGCATGGCAACGCACCACCCGGTTCAACGCAAAGCTCGGCGCAAACCCAC
GGATTGATGCGTGCGCAGAGCGGAATCGACATCGAGCAACTGGTTGCCGAGTTCAGGGCGCTGCGGTCGAGCATCCTCCG
GTTATGGAGCGAGGCCCATTCTGCAGGTCCGGACACCATCCATGACATCACGCGGTTCAATGAGGCGATCGACCAGGCCG
TGGCGGAGTCGGTGCAGTTCTACGCCCAGGAGCGCGAGCGTTGGCGCGAGATTTTTCTGGGCGTCCTCGGGCATGATCTG
CGTGGGCCCCTGAATGCCGTCGCCCTGATGGTGGAGCTCATGGCCAAGCAGGGCATCGCGCCTGTCCAGCAGACTGCCAT
GCTCGAGCGAGGGGTCCACCGCATGACGACCCTCCTGGACTCGCTCCTGGAGTACAGCCGGTCCAACCTGGGCGTCGGCA
TGGTGTTGCATCTGGCGCCGACCGATCTGGCAGCGGCTTGCAGCGAGGAGGTTCAGCTCCAGCGCCTCGCCCATCCGGGC
GCACGGATCGAGTTTTCGGCACAAGGGCCGACGGAGGGAACATACGACGCGTCCCGGGTCCGGGAGGCGCTCGGCAATCT
CGTTTCCAACGCTGTCAAGCACGGAGACGCCGGGGGATCCATCACGGTCCGCGTCAAGGGCACCGCGCATGGGGTGGCCA
TCTCGGTCGAAAACGCCGGTGAACTGGCACCGGAGAGCATTGACGATCTGTTCGAGCCGCTTCGGCGCGGGCTTCATGGT
CCGGGCACAGACCGCACGCACCTGGGGCTTGGGCTGTTCATCGCGCGGCAGATCGCACGCGCCCACCACGGCGACGCCAC
GGGCCATTGCGAGAATCACCAGGTGCGCTTCACGCTGGAGCTCCCGAAGGGCTGA

Upstream 100 bases:

>100_bases
CGGAAAAATGCGTCGAAGCGCAGGATGAGGGTCTGTTCAGGGAAGGCGGGACACAGTACCGTTCACGGCCGATATTTGCG
ATGAGAAAGGACAGACGATC

Downstream 100 bases:

>100_bases
GCCGGGCGGTGCAACCGCCCCGTGCCGTCAGGCCTTCACCAGCAGGTCGCCCGTGATGTCGGAGACCTTCGCGACGCTGG
TGAGCGTCATCGCCACGCGC

Product: histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRLAAFLESTRERILEEAVAYARTIPALRKTDDKALRDHLPQILEAISADLRTPQTRAQSIQKSHGNAPPGSTQSSAQTH
GLMRAQSGIDIEQLVAEFRALRSSILRLWSEAHSAGPDTIHDITRFNEAIDQAVAESVQFYAQERERWREIFLGVLGHDL
RGPLNAVALMVELMAKQGIAPVQQTAMLERGVHRMTTLLDSLLEYSRSNLGVGMVLHLAPTDLAAACSEEVQLQRLAHPG
ARIEFSAQGPTEGTYDASRVREALGNLVSNAVKHGDAGGSITVRVKGTAHGVAISVENAGELAPESIDDLFEPLRRGLHG
PGTDRTHLGLGLFIARQIARAHHGDATGHCENHQVRFTLELPKG

Sequences:

>Translated_364_residues
MRLAAFLESTRERILEEAVAYARTIPALRKTDDKALRDHLPQILEAISADLRTPQTRAQSIQKSHGNAPPGSTQSSAQTH
GLMRAQSGIDIEQLVAEFRALRSSILRLWSEAHSAGPDTIHDITRFNEAIDQAVAESVQFYAQERERWREIFLGVLGHDL
RGPLNAVALMVELMAKQGIAPVQQTAMLERGVHRMTTLLDSLLEYSRSNLGVGMVLHLAPTDLAAACSEEVQLQRLAHPG
ARIEFSAQGPTEGTYDASRVREALGNLVSNAVKHGDAGGSITVRVKGTAHGVAISVENAGELAPESIDDLFEPLRRGLHG
PGTDRTHLGLGLFIARQIARAHHGDATGHCENHQVRFTLELPKG
>Mature_364_residues
MRLAAFLESTRERILEEAVAYARTIPALRKTDDKALRDHLPQILEAISADLRTPQTRAQSIQKSHGNAPPGSTQSSAQTH
GLMRAQSGIDIEQLVAEFRALRSSILRLWSEAHSAGPDTIHDITRFNEAIDQAVAESVQFYAQERERWREIFLGVLGHDL
RGPLNAVALMVELMAKQGIAPVQQTAMLERGVHRMTTLLDSLLEYSRSNLGVGMVLHLAPTDLAAACSEEVQLQRLAHPG
ARIEFSAQGPTEGTYDASRVREALGNLVSNAVKHGDAGGSITVRVKGTAHGVAISVENAGELAPESIDDLFEPLRRGLHG
PGTDRTHLGLGLFIARQIARAHHGDATGHCENHQVRFTLELPKG

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=226, Percent_Identity=26.5486725663717, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87082128, Length=240, Percent_Identity=28.75, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786600, Length=206, Percent_Identity=28.6407766990291, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39618; Mature: 39618

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAAFLESTRERILEEAVAYARTIPALRKTDDKALRDHLPQILEAISADLRTPQTRAQS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IQKSHGNAPPGSTQSSAQTHGLMRAQSGIDIEQLVAEFRALRSSILRLWSEAHSAGPDTI
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HDITRFNEAIDQAVAESVQFYAQERERWREIFLGVLGHDLRGPLNAVALMVELMAKQGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PVQQTAMLERGVHRMTTLLDSLLEYSRSNLGVGMVLHLAPTDLAAACSEEVQLQRLAHPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
ARIEFSAQGPTEGTYDASRVREALGNLVSNAVKHGDAGGSITVRVKGTAHGVAISVENAG
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCC
ELAPESIDDLFEPLRRGLHGPGTDRTHLGLGLFIARQIARAHHGDATGHCENHQVRFTLE
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
LPKG
CCCC
>Mature Secondary Structure
MRLAAFLESTRERILEEAVAYARTIPALRKTDDKALRDHLPQILEAISADLRTPQTRAQS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IQKSHGNAPPGSTQSSAQTHGLMRAQSGIDIEQLVAEFRALRSSILRLWSEAHSAGPDTI
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HDITRFNEAIDQAVAESVQFYAQERERWREIFLGVLGHDLRGPLNAVALMVELMAKQGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PVQQTAMLERGVHRMTTLLDSLLEYSRSNLGVGMVLHLAPTDLAAACSEEVQLQRLAHPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
ARIEFSAQGPTEGTYDASRVREALGNLVSNAVKHGDAGGSITVRVKGTAHGVAISVENAG
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCC
ELAPESIDDLFEPLRRGLHGPGTDRTHLGLGLFIARQIARAHHGDATGHCENHQVRFTLE
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
LPKG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]