Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is amiC [H]
Identifier: 120612151
GI number: 120612151
Start: 3869041
End: 3870303
Strand: Reverse
Name: amiC [H]
Synonym: Aave_3500
Alternate gene names: 120612151
Gene position: 3870303-3869041 (Counterclockwise)
Preceding gene: 120612154
Following gene: 120612150
Centisome position: 72.3
GC content: 63.5
Gene sequence:
>1263_bases ATGCAACGTCGCTTCACTCTCCAGGCGCTGTGCGCCGCAGCCGCCCTGGCAGGCCTCTCCGCGCTGCCTGCCCATGCGGC CGACACCATCAAGGTCGGCGTGCTGCACAGCCTCTCGGGCACCATGGCCATCTCCGAAACGGTGCTCAAGGACACGGTGC TGATGGCCATCGAGGATATCAACGCCAAGGGCGGCGTGCTGGGCAAGAAGCTCGAGCCCGTGGTGGTGGACCCGGCCTCC AACTGGCCGCTCTTCGCCGAAAAGACCAAGCAGCTGCTGGGCCAGGACAAGGTGTCTGTGATCTTCGGCTGCTGGACCAG CGTGAGCCGCAAGTCGGTGCTGCCCGTGGTCGAGGAAATGAACGGCCTGCTGTTCTACCCCGTGCAGTACGAAGGCGAGG AGCTCTCCAGGAACGTGTTCTACACGGGCGCCGCGCCCAACCAGCAGGCCATTCCCGCGGTGGATTACCTCATGAGCAAG GACGGCGGCGGTGCCAAGCGCTGGGTGCTGCTGGGCACCGACTATGTCTATCCCCGCACCACCAACAAGATCCTGCGCGC CTACCTGAAGTCCAAGGGCGTGAAGGATTCGGACATCGACGAGAAGTACACCCCCTTCGGCCACTCCGACTACCAGACCA TCGTGGCCGACATCAGGAAGTTCAGCCAGGGCGGCAAGACGGCCGTGGTCTCCACCATCAACGGGGATTCCAACGTGCCC TTCTACAAGGAACTGGGCAACGCGGGCCTGAAGGCCAAGGACGTGCCGGTGGTGGCCTTCAGCGTGGGCGAGGAAGAACT GCGCGGCGTGGACACCAAGCCGCTCGTGGGCCACCTGGCCGCATGGAACTACTTCATGTCCCTGAAGAACCCGGAGAACA CCGCCTTCATCCAGCAGTGGAGCGCCTACGCCAAGAAGAACAACATCCCGGGCCACAAGGACAAGCCGCTGACCAACGAC CCGATGGAGGCGACCTGGATCGGCATCCACATGTGGAAGCAGGCCGTGGAGAAGGCCAAGAGCACCGACGTGGACAAGGT GATCGCCGCCATGGCCGGCCAGACCTTCAAGGCGCCCTCGGGCATCGTCAGCAAGATGGACGAGAAGAACCACCACCTGC ACAAGAGCGTGTTCATCGGCGAGATCAAGGCCGACGGCCAGTTCAACGTGGTGTGGAAGACGCCCGGCCCGGTCAAGGCC AAGCCGTGGAGCCCGTACATCGAGGGCAACGACAAGAAGAAGGACGAGCCCCTGACCAGGTAA
Upstream 100 bases:
>100_bases GCCCCTTGGCGTATTTCGCGGCCGGGGCGGCCTTCGCAGAATCGGTTCCAGCGATTCCCCGACGACCCCGTCCTTCACTT CCTTCCCGGAGCCCTCACCC
Downstream 100 bases:
>100_bases CACCCCCCTGAGGCGCTGCGCGCCTTCCCCCCTCTCTCACGCTGCGCGTGGGAGGGGGGACGACGCCAGCGGCCCGGCGG AGCCGGTTCCGCGGCGTCTG
Product: twin-arginine translocation pathway signal protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MQRRFTLQALCAAAALAGLSALPAHAADTIKVGVLHSLSGTMAISETVLKDTVLMAIEDINAKGGVLGKKLEPVVVDPAS NWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSRNVFYTGAAPNQQAIPAVDYLMSK DGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDSDIDEKYTPFGHSDYQTIVADIRKFSQGGKTAVVSTINGDSNVP FYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSLKNPENTAFIQQWSAYAKKNNIPGHKDKPLTND PMEATWIGIHMWKQAVEKAKSTDVDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKA KPWSPYIEGNDKKKDEPLTR
Sequences:
>Translated_420_residues MQRRFTLQALCAAAALAGLSALPAHAADTIKVGVLHSLSGTMAISETVLKDTVLMAIEDINAKGGVLGKKLEPVVVDPAS NWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSRNVFYTGAAPNQQAIPAVDYLMSK DGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDSDIDEKYTPFGHSDYQTIVADIRKFSQGGKTAVVSTINGDSNVP FYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSLKNPENTAFIQQWSAYAKKNNIPGHKDKPLTND PMEATWIGIHMWKQAVEKAKSTDVDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKA KPWSPYIEGNDKKKDEPLTR >Mature_420_residues MQRRFTLQALCAAAALAGLSALPAHAADTIKVGVLHSLSGTMAISETVLKDTVLMAIEDINAKGGVLGKKLEPVVVDPAS NWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSRNVFYTGAAPNQQAIPAVDYLMSK DGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDSDIDEKYTPFGHSDYQTIVADIRKFSQGGKTAVVSTINGDSNVP FYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSLKNPENTAFIQQWSAYAKKNNIPGHKDKPLTND PMEATWIGIHMWKQAVEKAKSTDVDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKA KPWSPYIEGNDKKKDEPLTR
Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46008; Mature: 46008
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRFTLQALCAAAALAGLSALPAHAADTIKVGVLHSLSGTMAISETVLKDTVLMAIEDI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHECC NAKGGVLGKKLEPVVVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEM CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHHHC NGLLFYPVQYEGEELSRNVFYTGAAPNQQAIPAVDYLMSKDGGGAKRWVLLGTDYVYPRT CCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCEECCCC TNKILRAYLKSKGVKDSDIDEKYTPFGHSDYQTIVADIRKFSQGGKTAVVSTINGDSNVP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC FYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSLKNPENTAFIQQW HHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHH SAYAKKNNIPGHKDKPLTNDPMEATWIGIHMWKQAVEKAKSTDVDKVIAAMAGQTFKAPS HHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH GIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPWSPYIEGNDKKKDEPLTR HHHHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQRRFTLQALCAAAALAGLSALPAHAADTIKVGVLHSLSGTMAISETVLKDTVLMAIEDI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHECC NAKGGVLGKKLEPVVVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEM CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHHHC NGLLFYPVQYEGEELSRNVFYTGAAPNQQAIPAVDYLMSKDGGGAKRWVLLGTDYVYPRT CCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCEECCCC TNKILRAYLKSKGVKDSDIDEKYTPFGHSDYQTIVADIRKFSQGGKTAVVSTINGDSNVP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC FYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSLKNPENTAFIQQW HHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHH SAYAKKNNIPGHKDKPLTNDPMEATWIGIHMWKQAVEKAKSTDVDKVIAAMAGQTFKAPS HHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH GIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPWSPYIEGNDKKKDEPLTR HHHHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]