Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is braD [H]

Identifier: 120612150

GI number: 120612150

Start: 3867276

End: 3868856

Strand: Reverse

Name: braD [H]

Synonym: Aave_3499

Alternate gene names: 120612150

Gene position: 3868856-3867276 (Counterclockwise)

Preceding gene: 120612151

Following gene: 120612149

Centisome position: 72.28

GC content: 70.84

Gene sequence:

>1581_bases
ATGTTCTCATCCCTATTTCACCGCCTGATCGCCTGCCTGCTGCTGTGCGCGGCGGCACAGGCGCATGCGCTCACGGCGGA
GGCGGCGCGGGCGATGGCCGCGGGCGATACCGACGAGCGGATCGCGGCGCTGCAGCAGGCCGTGGCCGCGCCGGACGACG
CCACGGTGGCCTTCATCCGCGCCATGGCCGACGATGCGGTGAAGATCGCGGGTGGCCGGGCCATCGTGGTGAAGGACGGG
CAGGGCGCCGATCCCGTCACCGGCGCGCCGGTGGACGTGCCGGAGGATGCGGAGGACATCGTCAACAACAACCGCATGCG
CGGCGAATTCGACACCGCGCTGGCGTCGCTGCAGCTCATGTCGCCGGATGCGGCGCAGCGCCGCGCGGCGATCGACGCGC
TCAGGGACGAGAGCGACGAGGCGCGCCTGCCCCTGATCGACAAGGCCCTGGCCGCCGAGCGCGAGCCGGGGCTCAAGGCC
CGGCTCGAGGCGATCCGCGCGCGCATCCAGCTCTCGGCGAGCGACCCGGCGCAGCGCCAGCTGGCGGCGCAGGCCCTGGC
CGGCAGCGGCAACCCGGCCACGCGCACGGTGCTGCTGGAGCAACTGCGCAACGAACAGGACCCGAAGGTGCGCGCGGCGA
TCGATTCCGCGCTGAAGGCCGTGGAAGCGCGGCTGCAGTGGGGCGAGCGCCTGGGGGCGCTGTTCTCGGGCCTCAGCCTG
GGATCCATCCTGCTGCTGGTGGCGCTGGGCCTGGCCATCACCTACGGGCTGATGGGCGTCATCAACATGGCCCATGGCGA
ACTCATGATGATCGGCGCCTACGCCACGTATGTGGTGCAGGGGCTGTTCCAGCGCTACCTGCCGGGCGCCTTCGATGCGT
ACCTCGTCGCGGCCGTGCCGGTCGCATTCCTCGCGTCGGCGCTCATGGGCGCGGTGCTGGAGCGCGGCGTGATCCGTTTT
CTCTACGGCCGGCCGCTGGAGACGCTGCTGGCCACCTGGGGCATCAGCCTGATGCTGCAGCAGTTGGTGCGCAGCGTGTT
CGGCGCGCAGAACGTGGGCGTGGAAAACCCCGCCTGGATGAGCGGCGGCGTGCAGGTGCTGGAGAACCTGCAATTGCCGT
GGAACCGGCTGGTGATCGTGGTGTTCGCGTTCGCCGTGCTGGGCGGCGTGGCCTTCCTCATCGGCCGCACGCGGCTGGGC
CTGTTCGTGCGCGGTGTGACGCAGAACCGCCCGATCGCCTCGTGCATGGGCGTGAACACCGCGCGCGTCGATACCTATGC
CTTCGCGCTGGGCTCGGGCATCGCGGGCCTGGCGGGCTGCGCCCTGAGCCAGGTGGGCAACGTGGGGCCGGACCTGGGGC
AGGGCTACATCGTGGACGCCTTCATGGTGGTGGTGCTGGGCGGTGTCGGCCAGCTCGCGGGCACCGTCTATGCCGCGCTG
GGGCTGGGCGTGCTCAACAAATTCCTCGAGGGCTGGGCGGGCGCGGTGCTGGCCAAGATCGCCGTGCTGGTCCTCATCAT
CGTCTTCATCCAGAAGCGGCCGCAGGGCATCTTCGCGGTGAAGGGGCGCGCTGCGGACTGA

Upstream 100 bases:

>100_bases
GGTTCCGCGGCGTCTGCTGGCCTGGGCCGCGCAGTGCTTGCGCCATGACGCTGACGGACATGGCTGCAGATCCTCCGTTC
GCGATGTTTTTTCCTTCACC

Downstream 100 bases:

>100_bases
TATGGAACACCCCCCTGTGTCGCTTCGCTCCTTCCCCCCTCTCTCGCATGGCTGCGCCCTGCGGGAGGGGGGACGCCGCC
GGCGCGGCGGGGCGGCCCTT

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MFSSLFHRLIACLLLCAAAQAHALTAEAARAMAAGDTDERIAALQQAVAAPDDATVAFIRAMADDAVKIAGGRAIVVKDG
QGADPVTGAPVDVPEDAEDIVNNNRMRGEFDTALASLQLMSPDAAQRRAAIDALRDESDEARLPLIDKALAAEREPGLKA
RLEAIRARIQLSASDPAQRQLAAQALAGSGNPATRTVLLEQLRNEQDPKVRAAIDSALKAVEARLQWGERLGALFSGLSL
GSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVPVAFLASALMGAVLERGVIRF
LYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWMSGGVQVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLG
LFVRGVTQNRPIASCMGVNTARVDTYAFALGSGIAGLAGCALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAAL
GLGVLNKFLEGWAGAVLAKIAVLVLIIVFIQKRPQGIFAVKGRAAD

Sequences:

>Translated_526_residues
MFSSLFHRLIACLLLCAAAQAHALTAEAARAMAAGDTDERIAALQQAVAAPDDATVAFIRAMADDAVKIAGGRAIVVKDG
QGADPVTGAPVDVPEDAEDIVNNNRMRGEFDTALASLQLMSPDAAQRRAAIDALRDESDEARLPLIDKALAAEREPGLKA
RLEAIRARIQLSASDPAQRQLAAQALAGSGNPATRTVLLEQLRNEQDPKVRAAIDSALKAVEARLQWGERLGALFSGLSL
GSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVPVAFLASALMGAVLERGVIRF
LYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWMSGGVQVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLG
LFVRGVTQNRPIASCMGVNTARVDTYAFALGSGIAGLAGCALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAAL
GLGVLNKFLEGWAGAVLAKIAVLVLIIVFIQKRPQGIFAVKGRAAD
>Mature_526_residues
MFSSLFHRLIACLLLCAAAQAHALTAEAARAMAAGDTDERIAALQQAVAAPDDATVAFIRAMADDAVKIAGGRAIVVKDG
QGADPVTGAPVDVPEDAEDIVNNNRMRGEFDTALASLQLMSPDAAQRRAAIDALRDESDEARLPLIDKALAAEREPGLKA
RLEAIRARIQLSASDPAQRQLAAQALAGSGNPATRTVLLEQLRNEQDPKVRAAIDSALKAVEARLQWGERLGALFSGLSL
GSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVPVAFLASALMGAVLERGVIRF
LYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWMSGGVQVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLG
LFVRGVTQNRPIASCMGVNTARVDTYAFALGSGIAGLAGCALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAAL
GLGVLNKFLEGWAGAVLAKIAVLVLIIVFIQKRPQGIFAVKGRAAD

Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=304, Percent_Identity=27.6315789473684, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 55188; Mature: 55188

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSLFHRLIACLLLCAAAQAHALTAEAARAMAAGDTDERIAALQQAVAAPDDATVAFIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHH
AMADDAVKIAGGRAIVVKDGQGADPVTGAPVDVPEDAEDIVNNNRMRGEFDTALASLQLM
HHHHCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHC
SPDAAQRRAAIDALRDESDEARLPLIDKALAAEREPGLKARLEAIRARIQLSASDPAQRQ
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHH
LAAQALAGSGNPATRTVLLEQLRNEQDPKVRAAIDSALKAVEARLQWGERLGALFSGLSL
HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VAFLASALMGAVLERGVIRFLYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
SGGVQVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLGLFVRGVTQNRPIASCMGVNT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCH
ARVDTYAFALGSGIAGLAGCALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAAL
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
GLGVLNKFLEGWAGAVLAKIAVLVLIIVFIQKRPQGIFAVKGRAAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
>Mature Secondary Structure
MFSSLFHRLIACLLLCAAAQAHALTAEAARAMAAGDTDERIAALQQAVAAPDDATVAFIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHH
AMADDAVKIAGGRAIVVKDGQGADPVTGAPVDVPEDAEDIVNNNRMRGEFDTALASLQLM
HHHHCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHC
SPDAAQRRAAIDALRDESDEARLPLIDKALAAEREPGLKARLEAIRARIQLSASDPAQRQ
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHH
LAAQALAGSGNPATRTVLLEQLRNEQDPKVRAAIDSALKAVEARLQWGERLGALFSGLSL
HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VAFLASALMGAVLERGVIRFLYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
SGGVQVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLGLFVRGVTQNRPIASCMGVNT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCH
ARVDTYAFALGSGIAGLAGCALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAAL
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
GLGVLNKFLEGWAGAVLAKIAVLVLIIVFIQKRPQGIFAVKGRAAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2120183; 10984043; 2509433 [H]