Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612142
Identifier: 120612142
GI number: 120612142
Start: 3858775
End: 3859608
Strand: Direct
Name: 120612142
Synonym: Aave_3491
Alternate gene names: NA
Gene position: 3858775-3859608 (Clockwise)
Preceding gene: 120612135
Following gene: 120612144
Centisome position: 72.09
GC content: 75.78
Gene sequence:
>834_bases ATGAGCGCCCCGCAGGCCTGGGCGGCATGGGCAGGCGCGCACCCGCTGGCATTCTGGGGCGCAGGACTGTCGCTCGTGCT CGTGGCCGCGCTGCTGGCCCGGGGGGCCGCGCTGGCCGCCGCGCCGCACTGCGCGCCCTGGGCCGGTCGCTGGTCGGCGC CGCGGCATGCCGTGCCGCGCCTCTGGGCGGCGCTGGCCGCCGCCGCGGTGCTGATATGGGGCTGCGCCGAGCTGCTGGGG CTGCTGGCGCAGGAATGGTCGGCCCCGACCGCATGGGCGCGGATGGACGAGACGCTGGCCGCCACCCTGCGGGCGCGGGC GGGCCTGCCCACCCTCACCCTGTTCGCGCGACTCACCCACGCGGGCGACACCGAGGTGCTGGCCGTACTGGCGGTGGTGG TGGGGATCGCGCTGTGGTGGCGCCGCCACCGGCTCCTGGCGGCCTGCTGGGCCGCGGCCCTAGCGGGCAACGGACTGCTC ACCCGCGGGTTCAAGCACGCCTTCGAACGGGTGCGGCCGGAGCATACGCACGGCGTCTCGGTGGCCGAAGGCTACAGCTT CCCGAGCGGGCACAGCAGCAGCTCGATGGTCGCCTACGGCATGCTGGCCTATCTGGCCGTGCGCCTGCTGCCGGCGCGCT GGCACCTCCCCGCCCTGCTCGCGGCAGCATCGGTGGTGTTCACGGTCGGCTGGAGCCGGGTGGTGCTGCAGGTGCACTAC GCGAGCGACGTGCTCGCGGGCTGGGTCACCGGAGGCACCTGGCTGGTCTGCTGCGTGCTGGTGACGAACGGCGTGGGCCA CTGGCAGCGCAGCCGCGCCGGCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases CCCCTGCTGCCGCCCCGGCCTCCGGCCCGTCTTCCCGCCCGCCCCCGCCCCGCACGGCCCGCAGGCACCTGCAGGGCCCG CCCGCCGCGAAGGCCCGCCC
Downstream 100 bases:
>100_bases GTCAGGGCGCGGGCGGCCGGGAGGCGCTGCGCTGCGCGGCCAGCGATGCGGCGAACACGGCCAGCCCGCCGATGGCGAGC AGCACGCCCACCCAGCCGGT
Product: phosphoesterase, PA-phosphatase-like protein
Products: NA
Alternate protein names: PAP2 Superfamily; Phosphoesterase PA-Phosphatase Related Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSAPQAWAAWAGAHPLAFWGAGLSLVLVAALLARGAALAAAPHCAPWAGRWSAPRHAVPRLWAALAAAAVLIWGCAELLG LLAQEWSAPTAWARMDETLAATLRARAGLPTLTLFARLTHAGDTEVLAVLAVVVGIALWWRRHRLLAACWAAALAGNGLL TRGFKHAFERVRPEHTHGVSVAEGYSFPSGHSSSSMVAYGMLAYLAVRLLPARWHLPALLAAASVVFTVGWSRVVLQVHY ASDVLAGWVTGGTWLVCCVLVTNGVGHWQRSRAGAAA
Sequences:
>Translated_277_residues MSAPQAWAAWAGAHPLAFWGAGLSLVLVAALLARGAALAAAPHCAPWAGRWSAPRHAVPRLWAALAAAAVLIWGCAELLG LLAQEWSAPTAWARMDETLAATLRARAGLPTLTLFARLTHAGDTEVLAVLAVVVGIALWWRRHRLLAACWAAALAGNGLL TRGFKHAFERVRPEHTHGVSVAEGYSFPSGHSSSSMVAYGMLAYLAVRLLPARWHLPALLAAASVVFTVGWSRVVLQVHY ASDVLAGWVTGGTWLVCCVLVTNGVGHWQRSRAGAAA >Mature_276_residues SAPQAWAAWAGAHPLAFWGAGLSLVLVAALLARGAALAAAPHCAPWAGRWSAPRHAVPRLWAALAAAAVLIWGCAELLGL LAQEWSAPTAWARMDETLAATLRARAGLPTLTLFARLTHAGDTEVLAVLAVVVGIALWWRRHRLLAACWAAALAGNGLLT RGFKHAFERVRPEHTHGVSVAEGYSFPSGHSSSSMVAYGMLAYLAVRLLPARWHLPALLAAASVVFTVGWSRVVLQVHYA SDVLAGWVTGGTWLVCCVLVTNGVGHWQRSRAGAAA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29270; Mature: 29139
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPQAWAAWAGAHPLAFWGAGLSLVLVAALLARGAALAAAPHCAPWAGRWSAPRHAVPR CCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHH LWAALAAAAVLIWGCAELLGLLAQEWSAPTAWARMDETLAATLRARAGLPTLTLFARLTH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC AGDTEVLAVLAVVVGIALWWRRHRLLAACWAAALAGNGLLTRGFKHAFERVRPEHTHGVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC VAEGYSFPSGHSSSSMVAYGMLAYLAVRLLPARWHLPALLAAASVVFTVGWSRVVLQVHY HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH ASDVLAGWVTGGTWLVCCVLVTNGVGHWQRSRAGAAA HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure SAPQAWAAWAGAHPLAFWGAGLSLVLVAALLARGAALAAAPHCAPWAGRWSAPRHAVPR CCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHH LWAALAAAAVLIWGCAELLGLLAQEWSAPTAWARMDETLAATLRARAGLPTLTLFARLTH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC AGDTEVLAVLAVVVGIALWWRRHRLLAACWAAALAGNGLLTRGFKHAFERVRPEHTHGVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC VAEGYSFPSGHSSSSMVAYGMLAYLAVRLLPARWHLPALLAAASVVFTVGWSRVVLQVHY HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH ASDVLAGWVTGGTWLVCCVLVTNGVGHWQRSRAGAAA HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA