Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612135

Identifier: 120612135

GI number: 120612135

Start: 3848525

End: 3849517

Strand: Direct

Name: 120612135

Synonym: Aave_3484

Alternate gene names: NA

Gene position: 3848525-3849517 (Clockwise)

Preceding gene: 120612134

Following gene: 120612142

Centisome position: 71.9

GC content: 74.42

Gene sequence:

>993_bases
ATGCTGGACAACCTGACGCCCTTCGCCGCGGAGCTGCTGCCGGGCCACCGGCCGGACGGCAGCGCGTGCCGGACGCTGGT
CATCAAGGCCACGCTGGATTTCGCCGGCCGGCCCGTCGCCCAGGGCGGCGCATTGCCCATCTACCGCGGCGACGCGTTTT
TCGCGGAGGACGGGCTGCAGGGCACCGTGCGGCACGAGGCCGACCTCGCCCCCTTCAAGCCGCGGGTGGACGTGGTGTTC
AACGGCTTCGCCTACGCGCCCGGAGGCCGTCCGGCGGACCGCTTCGACGCGGGCCTGTCCATCGGCGCGGAAACCCGCAC
GGTGCGCGTCCACGGGCGGCGCGTGTGGCGCCGGCGCATGGGACTGTTCCCCGTGGCGGAGGCCTGCGAGCCGGCGCTGC
GCGTGCCGCTGGTGTACGGCCTCGCCTTCGGCGGACAGGACGCGGAAGACCCGATGGCCTTCCATGCCGGCAATCCGTCG
GGCACCGGCTTCAGCGCCGGGGTGCCGCGGGACGGCGCGCCGCTGCACCAGATCGAGTGGGCGGATGCGCCCGTGCGCCT
GCCCTCCGGCAATGACCCGCCCGCGGGCTTCGGCTGCATCGGACGCACGTGGCTGCCCCGCCGCGCCCTGTGGGGCAGCT
ATGCCCCGCAGGAGCTGCAGCAGGCGCCCGGCCTCGTGGCGCGCATGCCGGCCACCTTCGATCCGGCGGCCTGGAACTGC
GCGCACCCGCGCATGCAGTTCGCGCCGGGACAGGTCCGGCCGGGCACGCGCATCCGCTGGAAGCACCTGTGCGCCCATGG
CGAGGGGGAAACCGCCGTGCCGGACCTGCAGCCGGCCGTGTCCTGGGCGGTGCGGGGCGAGCGCGGCACCGTCCGCCCCG
CGTTCGACACCCTCGTGCTGGAGCCCGAGCACGGCCACATGGTGGTGGTCTGGCGCCACACGTTCGACAGGGAAGCCGCC
CGGTACCTGGAAAGCCTGCAGGTGCATCTCTGA

Upstream 100 bases:

>100_bases
CGGGGCACGGGCAGTTCGATGACGTTCATGCGAAAAGGCGCGCCGCAGGCCGCGGCGCGCGTGGGATCAAAGACAATGCC
GGGCAGGAGGATCCCACCCG

Downstream 100 bases:

>100_bases
CGGGCGCTCAGTTGATGCGGACCTCGGCCGCATCGATGTCCACGAGGTCGCGCGCGTCGTGCTCGATCTTCAGGGCCACG
AGGCGCGCGAGACCCTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLDNLTPFAAELLPGHRPDGSACRTLVIKATLDFAGRPVAQGGALPIYRGDAFFAEDGLQGTVRHEADLAPFKPRVDVVF
NGFAYAPGGRPADRFDAGLSIGAETRTVRVHGRRVWRRRMGLFPVAEACEPALRVPLVYGLAFGGQDAEDPMAFHAGNPS
GTGFSAGVPRDGAPLHQIEWADAPVRLPSGNDPPAGFGCIGRTWLPRRALWGSYAPQELQQAPGLVARMPATFDPAAWNC
AHPRMQFAPGQVRPGTRIRWKHLCAHGEGETAVPDLQPAVSWAVRGERGTVRPAFDTLVLEPEHGHMVVVWRHTFDREAA
RYLESLQVHL

Sequences:

>Translated_330_residues
MLDNLTPFAAELLPGHRPDGSACRTLVIKATLDFAGRPVAQGGALPIYRGDAFFAEDGLQGTVRHEADLAPFKPRVDVVF
NGFAYAPGGRPADRFDAGLSIGAETRTVRVHGRRVWRRRMGLFPVAEACEPALRVPLVYGLAFGGQDAEDPMAFHAGNPS
GTGFSAGVPRDGAPLHQIEWADAPVRLPSGNDPPAGFGCIGRTWLPRRALWGSYAPQELQQAPGLVARMPATFDPAAWNC
AHPRMQFAPGQVRPGTRIRWKHLCAHGEGETAVPDLQPAVSWAVRGERGTVRPAFDTLVLEPEHGHMVVVWRHTFDREAA
RYLESLQVHL
>Mature_330_residues
MLDNLTPFAAELLPGHRPDGSACRTLVIKATLDFAGRPVAQGGALPIYRGDAFFAEDGLQGTVRHEADLAPFKPRVDVVF
NGFAYAPGGRPADRFDAGLSIGAETRTVRVHGRRVWRRRMGLFPVAEACEPALRVPLVYGLAFGGQDAEDPMAFHAGNPS
GTGFSAGVPRDGAPLHQIEWADAPVRLPSGNDPPAGFGCIGRTWLPRRALWGSYAPQELQQAPGLVARMPATFDPAAWNC
AHPRMQFAPGQVRPGTRIRWKHLCAHGEGETAVPDLQPAVSWAVRGERGTVRPAFDTLVLEPEHGHMVVVWRHTFDREAA
RYLESLQVHL

Specific function: Unknown

COG id: COG5351

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35888; Mature: 35888

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNLTPFAAELLPGHRPDGSACRTLVIKATLDFAGRPVAQGGALPIYRGDAFFAEDGLQ
CCCCCCCHHHHHCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCEEEEECCEEEECCCCC
GTVRHEADLAPFKPRVDVVFNGFAYAPGGRPADRFDAGLSIGAETRTVRVHGRRVWRRRM
EEECCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHHHHHHHC
GLFPVAEACEPALRVPLVYGLAFGGQDAEDPMAFHAGNPSGTGFSAGVPRDGAPLHQIEW
CCCCCHHHCCHHHHCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEC
ADAPVRLPSGNDPPAGFGCIGRTWLPRRALWGSYAPQELQQAPGLVARMPATFDPAAWNC
CCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCEEEECCCCCCCCCCCC
AHPRMQFAPGQVRPGTRIRWKHLCAHGEGETAVPDLQPAVSWAVRGERGTVRPAFDTLVL
CCCCCCCCCCCCCCCCCEEHHHHEECCCCCCCCCCCCHHHHEEEECCCCCCCCCCEEEEE
EPEHGHMVVVWRHTFDREAARYLESLQVHL
CCCCCCEEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDNLTPFAAELLPGHRPDGSACRTLVIKATLDFAGRPVAQGGALPIYRGDAFFAEDGLQ
CCCCCCCHHHHHCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCEEEEECCEEEECCCCC
GTVRHEADLAPFKPRVDVVFNGFAYAPGGRPADRFDAGLSIGAETRTVRVHGRRVWRRRM
EEECCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHHHHHHHC
GLFPVAEACEPALRVPLVYGLAFGGQDAEDPMAFHAGNPSGTGFSAGVPRDGAPLHQIEW
CCCCCHHHCCHHHHCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEC
ADAPVRLPSGNDPPAGFGCIGRTWLPRRALWGSYAPQELQQAPGLVARMPATFDPAAWNC
CCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCEEEECCCCCCCCCCCC
AHPRMQFAPGQVRPGTRIRWKHLCAHGEGETAVPDLQPAVSWAVRGERGTVRPAFDTLVL
CCCCCCCCCCCCCCCCCEEHHHHEECCCCCCCCCCCCHHHHEEEECCCCCCCCCCEEEEE
EPEHGHMVVVWRHTFDREAARYLESLQVHL
CCCCCCEEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA