Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612112
Identifier: 120612112
GI number: 120612112
Start: 3821668
End: 3822381
Strand: Reverse
Name: 120612112
Synonym: Aave_3459
Alternate gene names: NA
Gene position: 3822381-3821668 (Counterclockwise)
Preceding gene: 120612113
Following gene: 120612105
Centisome position: 71.41
GC content: 71.99
Gene sequence:
>714_bases ATGCATTTCAGCTTCAATCAGCTCTGCGGGGCAGGTACCTCGCAACGCCGGTCGCACTCCGCGCAACCGGCCGCCACCTC CGCGACCCGCCAGTCCCACCCTGGCCGCAGGCTCGACGCCGCAGGCGGACCGGCCCCCCGGGGGCGCACTTTCCAGACCG ACCCGGCCGATTCCGGCCCGCCGCCCCGGCGCCCGGCGCCCGCGCTGCCGCAGGCGCACCGGATGCAGTCGCAACCCGCC GCTGCGCAGACCCTGGTGTTCGCGCCGCGCTTCCTGTCGAACGGGCCGGTGGAGGCCATCGTCCTCACCCCTGAACAGGA CGCGCAACTCTCGCGTGCCGACAGCGCCGCCACCCGGCTGGAGCGGCTGGTATCGCTCTCTCTGGGGCCGGCGGCCAGTG GCCGGCCTTCCGCCGCGGATCCGGAGCAGGTCGGCGCGCTGCAGCGCAAGCTGGGCGAACTCCAGGAGATTCAGGCGCGG AAGGCGCAGCTGGCCGAGGACGCGACGCAACTCCGGGAAGCCTTCGATGCGGGGACATCTCTGGGCATCGACTGGAACCG CCACAAGTCCTGGGAGCGCATCCTGAAAGCCCGTCCGGAGGAACGGATCGTCCAGGTCGATGAGGGCGTCGCCAATCTGC AGCACCGCCTGGGCGAGGCCCGGCACGCCATCGGCGAGCGCCGCGAAGCGGCGCTGGGCAAGTACGTTTTCTGA
Upstream 100 bases:
>100_bases ATACACATCAACAGGTTAAGCGCATCCGCACACTCATGCGCGTGTTGTGCAGACCTTCCCTAACCTCGCCGCATTCCTGA TTCGAACGGATCACCACACC
Downstream 100 bases:
>100_bases GCGAATGCCGGCACGGGCGCGGTGCCCGCGCCGGCCGTCAGTCGATGAGCCGCCCGCCGTCGTGGAACGGGTAGGGGCCC GGATACTGCCCGCTGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MHFSFNQLCGAGTSQRRSHSAQPAATSATRQSHPGRRLDAAGGPAPRGRTFQTDPADSGPPPRRPAPALPQAHRMQSQPA AAQTLVFAPRFLSNGPVEAIVLTPEQDAQLSRADSAATRLERLVSLSLGPAASGRPSAADPEQVGALQRKLGELQEIQAR KAQLAEDATQLREAFDAGTSLGIDWNRHKSWERILKARPEERIVQVDEGVANLQHRLGEARHAIGERREAALGKYVF
Sequences:
>Translated_237_residues MHFSFNQLCGAGTSQRRSHSAQPAATSATRQSHPGRRLDAAGGPAPRGRTFQTDPADSGPPPRRPAPALPQAHRMQSQPA AAQTLVFAPRFLSNGPVEAIVLTPEQDAQLSRADSAATRLERLVSLSLGPAASGRPSAADPEQVGALQRKLGELQEIQAR KAQLAEDATQLREAFDAGTSLGIDWNRHKSWERILKARPEERIVQVDEGVANLQHRLGEARHAIGERREAALGKYVF >Mature_237_residues MHFSFNQLCGAGTSQRRSHSAQPAATSATRQSHPGRRLDAAGGPAPRGRTFQTDPADSGPPPRRPAPALPQAHRMQSQPA AAQTLVFAPRFLSNGPVEAIVLTPEQDAQLSRADSAATRLERLVSLSLGPAASGRPSAADPEQVGALQRKLGELQEIQAR KAQLAEDATQLREAFDAGTSLGIDWNRHKSWERILKARPEERIVQVDEGVANLQHRLGEARHAIGERREAALGKYVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25602; Mature: 25602
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSFNQLCGAGTSQRRSHSAQPAATSATRQSHPGRRLDAAGGPAPRGRTFQTDPADSGP CCCCHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPRRPAPALPQAHRMQSQPAAAQTLVFAPRFLSNGPVEAIVLTPEQDAQLSRADSAATRL CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH ERLVSLSLGPAASGRPSAADPEQVGALQRKLGELQEIQARKAQLAEDATQLREAFDAGTS HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LGIDWNRHKSWERILKARPEERIVQVDEGVANLQHRLGEARHAIGERREAALGKYVF CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHFSFNQLCGAGTSQRRSHSAQPAATSATRQSHPGRRLDAAGGPAPRGRTFQTDPADSGP CCCCHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPRRPAPALPQAHRMQSQPAAAQTLVFAPRFLSNGPVEAIVLTPEQDAQLSRADSAATRL CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH ERLVSLSLGPAASGRPSAADPEQVGALQRKLGELQEIQARKAQLAEDATQLREAFDAGTS HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LGIDWNRHKSWERILKARPEERIVQVDEGVANLQHRLGEARHAIGERREAALGKYVF CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA