Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612105
Identifier: 120612105
GI number: 120612105
Start: 3814654
End: 3815778
Strand: Reverse
Name: 120612105
Synonym: Aave_3452
Alternate gene names: NA
Gene position: 3815778-3814654 (Counterclockwise)
Preceding gene: 120612112
Following gene: 120612101
Centisome position: 71.29
GC content: 72.0
Gene sequence:
>1125_bases ATGGCAACTTTCATCATCTCGTCCATGGTTTCCCGCCTCACCCCGACCAGCGCTCCGCCAACGCACCAAGCCCATGGCGC GCCTGCCGCGCCCCCGCCGCATGCGCGAGGCGCATCCTCCGCAGTGGCGGCCGGTGCCGGCGCAGCCCTGCGTCCCCGAG GGGTGCCCCCAGGACCTTCCGCGCCGCGCCGCGGCGTGGCCGGCGACGCGCTGTTGCGGCCCTATGTCATGGCGCGGGCG ATCGATGGACGGCACGTGGAAGGGGCGGATCTGGCCCGACTGCGGCAGGCCCACGGCACGGTCGAGGCAACGCGCAGCCT CCTGTCCATTGGGCGGGGCAATGTGGCTCAGGACATCGAGCGCACCGGCGGCGAGAGCCTGCGCGGGATGACCGCCGCCA AGGCCGTGGCGGAACACCTGGTGGGTGCGGGCTGGCCGCAGTTGGCCGCGAGGGCCGCCGGTGCGATCGCGGCCAGGGCC GGCAACTGCGACGAGCACGCGGCCCTCGCAGCCCTGTTGCACGTGCCCCGGCTGCGCCCGCAAGAGGCGCTCTGCCAGGT GATTTCCCACGAGATCCCGCACGTATGGACCGAAGTGCGCGGCGGTGGAGGGCCGGAGGACGACCTCGTCATGGATGCCT GGCTGGAAGGGCCCGCAGTGTTCGCTCCCGATGGGCAGTGGTCCGACACGCCGGCGACCAAGGAGGAATACTTTGTGCAG GGCGGTCCGGAAAAAGCCTGCCTCGACGTGTTGCTCGCATACTCCGGCGCCGCCTTGCATGCATGGGTCGAGTACGAACG GAGCCAGGTTCCGGAAGGCTCCCTGCCTCCCCCCGGCTATGCCTATCCAGCCATGCCGGCCGTCAGCAGGGCCTTCGAGC GCAGGGTCCAGCGGAAACTCTCCGGTGCCGGAGAGGCGGAGCGGGCCGCCAGTGCCGGGGTGCCCCGCGAGGCACTGACG GCGCTACCCGCGATGCAGGAGGCACGGCGCGCGGTGCGCTATGGTGTGCTGGCCGTAGGCGTGGCCCGGCAGATGACCGC CGGGCTGGACGTGCGCCAGGCCGTGGCAGAAGTGCCCGCCTTGCTGTACGGCGCCGCCTGCCGGCTCCGCCGGAGAACGT CCTGA
Upstream 100 bases:
>100_bases GCCCGGCCGCGTGACGGGGCGATGACAGCAGGGCAGTGCCCCGGGGGCGATGCCTTCGTTTCCCTGGTTGCCTGCTTCGC CCAGGGAGTCGCCGGATGGC
Downstream 100 bases:
>100_bases CGGCCCGACGCGCCCCGGGCCGGTGGCATCCGGCGTGCGTTCAGCTGCCCCGCCGCACCCGCATCAGCTCGTCGATGATC AGGCAGGCCGCGCCGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MATFIISSMVSRLTPTSAPPTHQAHGAPAAPPPHARGASSAVAAGAGAALRPRGVPPGPSAPRRGVAGDALLRPYVMARA IDGRHVEGADLARLRQAHGTVEATRSLLSIGRGNVAQDIERTGGESLRGMTAAKAVAEHLVGAGWPQLAARAAGAIAARA GNCDEHAALAALLHVPRLRPQEALCQVISHEIPHVWTEVRGGGGPEDDLVMDAWLEGPAVFAPDGQWSDTPATKEEYFVQ GGPEKACLDVLLAYSGAALHAWVEYERSQVPEGSLPPPGYAYPAMPAVSRAFERRVQRKLSGAGEAERAASAGVPREALT ALPAMQEARRAVRYGVLAVGVARQMTAGLDVRQAVAEVPALLYGAACRLRRRTS
Sequences:
>Translated_374_residues MATFIISSMVSRLTPTSAPPTHQAHGAPAAPPPHARGASSAVAAGAGAALRPRGVPPGPSAPRRGVAGDALLRPYVMARA IDGRHVEGADLARLRQAHGTVEATRSLLSIGRGNVAQDIERTGGESLRGMTAAKAVAEHLVGAGWPQLAARAAGAIAARA GNCDEHAALAALLHVPRLRPQEALCQVISHEIPHVWTEVRGGGGPEDDLVMDAWLEGPAVFAPDGQWSDTPATKEEYFVQ GGPEKACLDVLLAYSGAALHAWVEYERSQVPEGSLPPPGYAYPAMPAVSRAFERRVQRKLSGAGEAERAASAGVPREALT ALPAMQEARRAVRYGVLAVGVARQMTAGLDVRQAVAEVPALLYGAACRLRRRTS >Mature_373_residues ATFIISSMVSRLTPTSAPPTHQAHGAPAAPPPHARGASSAVAAGAGAALRPRGVPPGPSAPRRGVAGDALLRPYVMARAI DGRHVEGADLARLRQAHGTVEATRSLLSIGRGNVAQDIERTGGESLRGMTAAKAVAEHLVGAGWPQLAARAAGAIAARAG NCDEHAALAALLHVPRLRPQEALCQVISHEIPHVWTEVRGGGGPEDDLVMDAWLEGPAVFAPDGQWSDTPATKEEYFVQG GPEKACLDVLLAYSGAALHAWVEYERSQVPEGSLPPPGYAYPAMPAVSRAFERRVQRKLSGAGEAERAASAGVPREALTA LPAMQEARRAVRYGVLAVGVARQMTAGLDVRQAVAEVPALLYGAACRLRRRTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39019; Mature: 38888
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFIISSMVSRLTPTSAPPTHQAHGAPAAPPPHARGASSAVAAGAGAALRPRGVPPGPS CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC APRRGVAGDALLRPYVMARAIDGRHVEGADLARLRQAHGTVEATRSLLSIGRGNVAQDIE CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHH RTGGESLRGMTAAKAVAEHLVGAGWPQLAARAAGAIAARAGNCDEHAALAALLHVPRLRP HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH QEALCQVISHEIPHVWTEVRGGGGPEDDLVMDAWLEGPAVFAPDGQWSDTPATKEEYFVQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC GGPEKACLDVLLAYSGAALHAWVEYERSQVPEGSLPPPGYAYPAMPAVSRAFERRVQRKL CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SGAGEAERAASAGVPREALTALPAMQEARRAVRYGVLAVGVARQMTAGLDVRQAVAEVPA HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLYGAACRLRRRTS HHHHHHHHHHHCCC >Mature Secondary Structure ATFIISSMVSRLTPTSAPPTHQAHGAPAAPPPHARGASSAVAAGAGAALRPRGVPPGPS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC APRRGVAGDALLRPYVMARAIDGRHVEGADLARLRQAHGTVEATRSLLSIGRGNVAQDIE CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHH RTGGESLRGMTAAKAVAEHLVGAGWPQLAARAAGAIAARAGNCDEHAALAALLHVPRLRP HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH QEALCQVISHEIPHVWTEVRGGGGPEDDLVMDAWLEGPAVFAPDGQWSDTPATKEEYFVQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC GGPEKACLDVLLAYSGAALHAWVEYERSQVPEGSLPPPGYAYPAMPAVSRAFERRVQRKL CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SGAGEAERAASAGVPREALTALPAMQEARRAVRYGVLAVGVARQMTAGLDVRQAVAEVPA HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLYGAACRLRRRTS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA