Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612107

Identifier: 120612107

GI number: 120612107

Start: 3817041

End: 3818054

Strand: Direct

Name: 120612107

Synonym: Aave_3454

Alternate gene names: NA

Gene position: 3817041-3818054 (Clockwise)

Preceding gene: 120612106

Following gene: 120612108

Centisome position: 71.31

GC content: 69.13

Gene sequence:

>1014_bases
ATGCGATCCGCCCTCCAGAAACTCGCCCGCGCCGCCGCGCTCGCCCTCGGCCTGGCCGCCACCGGCGGTGCCTTCGCGCA
GACCGCCATCTGCTACAACTGCCCGCCCGAATGGGCCGACTGGGGCACCCAGCTCAAGGCCATCAAGGCCCGGACCGGCG
TGACCGTGCCGCCGGACAACAAGAACTCCGGCCAGTCGCTCGCACAGCTGTCCGCCGAACGCGCCAGCCCCGTGGCCGAC
GTGACCTACCTCGGCGTGACCTTCGCCATCCAGGCGCAGAAGGATGGCCTGCTGGGCACCTACCAGCCCGCCGGCTGGAA
GGACATTCCCGACGGCCTGAAGGACCCGGCCGGCCACTGGTTCACGATCCATTCGGGCACGCTGGGCTTCATGGTCAACG
TCGATGCGCTGGGCGGCAAGCCGGTGCCGAAGTCGTGGGCCGACCTGCTCAAGCCCGAGTACAAGGGCCTGATCGGCTAT
CTGGACCCGGCTTCGGCCTTCGTGGGCTACGTGGGCGCGGTGGCCGCCAACCAGGCGCGCGGCGGCACGCTGGAGAACTT
CGGCCCCGGCATCGACTACTTCAAGGCGCTGCAGAAGAACGAGCCGATCGTGCCCAAGCAGACCGCCTATGCGCGCGTGC
TCTCGGGCGAGATCGCGATCCTGCTGGACTACGACTTCAACGCCTACCGCGCGAAGTACAAGGACGGCGCCAACGTGCAG
TTCGTCATCCCCGCCGAGGGCACGGTGGTGGTGCCCTACGTGATGGGCATGGTGGCGAAGGCGCCCCATGCCGCCGACGC
GAAGAAGGTGCTGGATTTCGTGCTCTCCGACGAGGGCCAGGCGATCTGGGCCAAGGCCTACCTGCGGCCGGTGCGCGCCG
CCGCCATGCCCGCCGACGTGCAGGCCCGCTTCCTGCCCGCCAGCGAATATGCCCGCGCGAAGACGGTGGACTACGGCCGC
ATGGCCGCGGTGCAGAAGGCGTTCTCCGACCGCTACCTGCGGGACGTGAAATGA

Upstream 100 bases:

>100_bases
CCCCCTGCCCCGCCCAGATCGGTCCGTTCCGCCCGCTTTCTGCTTTTTCTCCGCCACGTTCCATCCACCCCCTTTTTCTT
TCTTCGCACAGGAGCCATCG

Downstream 100 bases:

>100_bases
CGGCACGCCACGGCGGCTTCGCTCCTTCGCGCGCCCTGCTGGCCGCGTGCGCCGCGCCGGCCGTGGCGTTCTTCGCGGCC
TTCTGGCTGCTGCCCACGGC

Product: putative periplasmic solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRSALQKLARAAALALGLAATGGAFAQTAICYNCPPEWADWGTQLKAIKARTGVTVPPDNKNSGQSLAQLSAERASPVAD
VTYLGVTFAIQAQKDGLLGTYQPAGWKDIPDGLKDPAGHWFTIHSGTLGFMVNVDALGGKPVPKSWADLLKPEYKGLIGY
LDPASAFVGYVGAVAANQARGGTLENFGPGIDYFKALQKNEPIVPKQTAYARVLSGEIAILLDYDFNAYRAKYKDGANVQ
FVIPAEGTVVVPYVMGMVAKAPHAADAKKVLDFVLSDEGQAIWAKAYLRPVRAAAMPADVQARFLPASEYARAKTVDYGR
MAAVQKAFSDRYLRDVK

Sequences:

>Translated_337_residues
MRSALQKLARAAALALGLAATGGAFAQTAICYNCPPEWADWGTQLKAIKARTGVTVPPDNKNSGQSLAQLSAERASPVAD
VTYLGVTFAIQAQKDGLLGTYQPAGWKDIPDGLKDPAGHWFTIHSGTLGFMVNVDALGGKPVPKSWADLLKPEYKGLIGY
LDPASAFVGYVGAVAANQARGGTLENFGPGIDYFKALQKNEPIVPKQTAYARVLSGEIAILLDYDFNAYRAKYKDGANVQ
FVIPAEGTVVVPYVMGMVAKAPHAADAKKVLDFVLSDEGQAIWAKAYLRPVRAAAMPADVQARFLPASEYARAKTVDYGR
MAAVQKAFSDRYLRDVK
>Mature_337_residues
MRSALQKLARAAALALGLAATGGAFAQTAICYNCPPEWADWGTQLKAIKARTGVTVPPDNKNSGQSLAQLSAERASPVAD
VTYLGVTFAIQAQKDGLLGTYQPAGWKDIPDGLKDPAGHWFTIHSGTLGFMVNVDALGGKPVPKSWADLLKPEYKGLIGY
LDPASAFVGYVGAVAANQARGGTLENFGPGIDYFKALQKNEPIVPKQTAYARVLSGEIAILLDYDFNAYRAKYKDGANVQ
FVIPAEGTVVVPYVMGMVAKAPHAADAKKVLDFVLSDEGQAIWAKAYLRPVRAAAMPADVQARFLPASEYARAKTVDYGR
MAAVQKAFSDRYLRDVK

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 36046; Mature: 36046

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSALQKLARAAALALGLAATGGAFAQTAICYNCPPEWADWGTQLKAIKARTGVTVPPDN
CHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
KNSGQSLAQLSAERASPVADVTYLGVTFAIQAQKDGLLGTYQPAGWKDIPDGLKDPAGHW
CCCHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCE
FTIHSGTLGFMVNVDALGGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAVAANQAR
EEEECCCEEEEEEEECCCCCCCCHHHHHHHCHHHHCCEEECCHHHHHHHHHHHHHHCCCC
GGTLENFGPGIDYFKALQKNEPIVPKQTAYARVLSGEIAILLDYDFNAYRAKYKDGANVQ
CCCCHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEE
FVIPAEGTVVVPYVMGMVAKAPHAADAKKVLDFVLSDEGQAIWAKAYLRPVRAAAMPADV
EEECCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCC
QARFLPASEYARAKTVDYGRMAAVQKAFSDRYLRDVK
CEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSALQKLARAAALALGLAATGGAFAQTAICYNCPPEWADWGTQLKAIKARTGVTVPPDN
CHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
KNSGQSLAQLSAERASPVADVTYLGVTFAIQAQKDGLLGTYQPAGWKDIPDGLKDPAGHW
CCCHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCE
FTIHSGTLGFMVNVDALGGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAVAANQAR
EEEECCCEEEEEEEECCCCCCCCHHHHHHHCHHHHCCEEECCHHHHHHHHHHHHHHCCCC
GGTLENFGPGIDYFKALQKNEPIVPKQTAYARVLSGEIAILLDYDFNAYRAKYKDGANVQ
CCCCHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEE
FVIPAEGTVVVPYVMGMVAKAPHAADAKKVLDFVLSDEGQAIWAKAYLRPVRAAAMPADV
EEECCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCC
QARFLPASEYARAKTVDYGRMAAVQKAFSDRYLRDVK
CEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]