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The map label for this gene is 120612101

Identifier: 120612101

GI number: 120612101

Start: 3809320

End: 3809877

Strand: Reverse

Name: 120612101

Synonym: Aave_3448

Alternate gene names: NA

Gene position: 3809877-3809320 (Counterclockwise)

Preceding gene: 120612105

Following gene: 120612100

Centisome position: 71.18

GC content: 67.2

Gene sequence:

>558_bases
GTGAAGGTCTTGAAGCTGTCGGCCCAGGGGCTGCCGCAATCGTGGATTTCGCTCGAACAGGCGGTCACGCACTATGCCGC
TGGCGAGGTGCGCTGGGAGTCCGGCGGGCCCATCGCGGTGTTCCGCGGCGGGCACAACGCGCTCACGGGCGAGCAGTCTG
TGATCGAGGTCAACAGCATCATCGGCACCAAGGGCGTGCCCGGCATCAACCCCTTCGGCCTCAAGCCCTCCCTCACCAAC
AGCAAGCTCTTCGCGCGCGACCGCAACATCTGCGCCTACTGCGGCGGCCACTTCCACGAGGAAGACCTCACGCGCGAGCA
CATCGTGCCCTTCGCTCGCAACGGCGCCGACCACTGGATGAACGTGGTCACCGCCTGCCGCGCCTGCAACCACCGCAAGG
GACCGCGCACGCCCGAGCAGGCCCACATGCCGCTGCTGTACGCCCCGTACGTGCCGAGCCTGTGGGAAGACTTCATCCTG
CGCAACCGGCGCATCCTCGCCGACCAGATGGAGTTCCTCATGGCGCATGTGCCCAGGTCCTCGCGGCTGCTGAGCTGA

Upstream 100 bases:

>100_bases
ATCCGTCGTGATTTGGGAGTATATTGTGCGGCACGGGCCCCCGCGGGTGGCCCGCGAGACATCAGCGTTCCGAATCTTGT
CGTGTTGCAAGGAGGGTGTT

Downstream 100 bases:

>100_bases
CGGGCCCTTCGTTCCCGACCGCCGTGTTCCGGCATGCGGTATGCGGTGCGCGGAACCGGCGCAGTCAGGGCATTCCCGCT
CGCCAGGATGGCGCAACGGT

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Restriction Endonuclease; Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; Nuclease; Hnh Endonuclease Domain Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKVLKLSAQGLPQSWISLEQAVTHYAAGEVRWESGGPIAVFRGGHNALTGEQSVIEVNSIIGTKGVPGINPFGLKPSLTN
SKLFARDRNICAYCGGHFHEEDLTREHIVPFARNGADHWMNVVTACRACNHRKGPRTPEQAHMPLLYAPYVPSLWEDFIL
RNRRILADQMEFLMAHVPRSSRLLS

Sequences:

>Translated_185_residues
MKVLKLSAQGLPQSWISLEQAVTHYAAGEVRWESGGPIAVFRGGHNALTGEQSVIEVNSIIGTKGVPGINPFGLKPSLTN
SKLFARDRNICAYCGGHFHEEDLTREHIVPFARNGADHWMNVVTACRACNHRKGPRTPEQAHMPLLYAPYVPSLWEDFIL
RNRRILADQMEFLMAHVPRSSRLLS
>Mature_185_residues
MKVLKLSAQGLPQSWISLEQAVTHYAAGEVRWESGGPIAVFRGGHNALTGEQSVIEVNSIIGTKGVPGINPFGLKPSLTN
SKLFARDRNICAYCGGHFHEEDLTREHIVPFARNGADHWMNVVTACRACNHRKGPRTPEQAHMPLLYAPYVPSLWEDFIL
RNRRILADQMEFLMAHVPRSSRLLS

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20652; Mature: 20652

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKLSAQGLPQSWISLEQAVTHYAAGEVRWESGGPIAVFRGGHNALTGEQSVIEVNSI
CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCCHHEEHHHH
IGTKGVPGINPFGLKPSLTNSKLFARDRNICAYCGGHFHEEDLTREHIVPFARNGADHWM
HCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHHCCHHHCCCCCCCCHHHHH
NVVTACRACNHRKGPRTPEQAHMPLLYAPYVPSLWEDFILRNRRILADQMEFLMAHVPRS
HHHHHHHHHCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SRLLS
CCCCC
>Mature Secondary Structure
MKVLKLSAQGLPQSWISLEQAVTHYAAGEVRWESGGPIAVFRGGHNALTGEQSVIEVNSI
CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCCHHEEHHHH
IGTKGVPGINPFGLKPSLTNSKLFARDRNICAYCGGHFHEEDLTREHIVPFARNGADHWM
HCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHHCCHHHCCCCCCCCHHHHH
NVVTACRACNHRKGPRTPEQAHMPLLYAPYVPSLWEDFILRNRRILADQMEFLMAHVPRS
HHHHHHHHHCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SRLLS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA