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The map label for this gene is tse [H]

Identifier: 120612097

GI number: 120612097

Start: 3804481

End: 3806034

Strand: Reverse

Name: tse [H]

Synonym: Aave_3444

Alternate gene names: 120612097

Gene position: 3806034-3804481 (Counterclockwise)

Preceding gene: 120612098

Following gene: 120612090

Centisome position: 71.1

GC content: 71.17

Gene sequence:

>1554_bases
ATGCCGCTATTCAAAAACATCACATTGGCGCAGAAGCTGGTCGCGCTGGTGGCTTTCTTCCTGGCCGTCGTCCTGCTCGT
CGGGGCCACGGGCCTGGCCCAGCTGCGCGCGGTGAGCGCCGCCCAGCGCGAGATGTACACCGACACCGTCGTCCCGTTGC
GCAAGGTGGTGGACGGGGGCCGGCAGGCGGCGGTGCACTTCCGGCGCATGTACCCGTTCATCCTCAAGACCGACGCGAAA
TCCCGCGAGGAAACGCTGTCGCTCAACCAGCAGTCGGAGCAGTCCGTGCTCGACGCCATCGGCCTGCTGCGCCAGGACGA
TGGCAGCGCGGAACTGCGCGCCACGGGCCAGAAGCTGGCGGACACCTGGGCCCGCTACAAGGCGTCGGTGGCCAGGCTGC
AGGCGGCTGCGCAGGCCGGCGATGCGGAAGCGGCCATGGGCGAGCTCAACGCCTCCACCGACCGGCTGCACGTCGAGGTC
CGCAACCTGCTGCTGGAAGCCGGCAAGCTGCAGGAGCAGCAGGCACGGGACGAGACCGAGCGCGTGGCCGCCTCCGTGGA
CCGCACCTTCCGCATCGTGTCCGCGCTCATCGCGGCGGGCGCGGTGCTCGGGGGGCTGCTGGGCTGGCGGATCATCCGCT
CCGTCCTGCGCCAGCTGGGCGGCGACCCGGCCCAGGCAACGGCGATCGCCCGCCAGATCGCGGACGGCGACCTGCGCGAG
AGCTTCGCGGCAGGCGCGGGCGACACCTCCAGCCTGGTCCACCATCTCTCGGCCATGCGCCTGCAACTGGCCCAGGTGAT
CGGGCAGGTCCGCCAGTCCGCGGACGCGGTTTCCCAGGCCTCCGTGGAGATATCCTCCGGCACGAACGACCTCTCGGCCC
GCACCGAGCAGCAGGCCGCCGCCCTGGAGCAGACGGCCGCATCGATGGAGCACCTGGGCTCCACCTCGCGCCAGAACGCC
GACAGCGCCCGCCAGGCCAATGAACTCGCCGTGAACGCGAGCACCGTGGCCGTGCGGGGCGGGGAGGTCGTGGCCGAGGT
CGTGCAGACCATGCGCGGCATCAACGATTCCAGCCGCAAGATCGCGGACATCATCGGCGTGATCGACTCCATCGCCTTCC
AGACCAACATCCTGGCGCTGAATGCGGCAGTGGAAGCGGCCCGCGCCGGCGAACAGGGCCGCGGCTTCGCCGTCGTGGCC
GGAGAGGTGCGGCTGCTGGCCCAGCGCAGCGCCCAGGCCGCGCGGGAGATCAAGGACCTGATCGGCGCCAGCGTCGAGCG
CGTGGGCCAGGGCTCGCAGCTGGTGGACCGGGCAGGCACCACCATGGCCGAAGTGGTGTCCGCCATCCAGCGCGTCACCG
GCCTGGTCAGCGAGATCAGCGCCGCCAGCGGGGCCCAGAGCGACGGCGTGGCCCAGGTCAGCGAAGCCATTACCGTCATG
GACCAGGGCACCCAGCAGAACGCCGCGCTGGTGGAGCAGAGCGCCGCCGCCGCCCAGTCCATGCAGCAGCAGGCCGCCCA
CCTCGTCCGCGCCGTGGACGCATTCCGCATCTGA

Upstream 100 bases:

>100_bases
GAAATGCCGTCATCTTTGATGAACGTGTATTAATTCCTTACGTTTCTGGCACCATGGGACGGCCTGCACGGATGAGTTGC
AGTTCGAGGGGTTCCGTTCC

Downstream 100 bases:

>100_bases
GCCGCCAGAGCTCGCCGCCCGGCGCCTCCGAGCCTGCGGAAGCTGAAACGCCTTGGTGCCAGACCCCGCCGAGAAAAAAG
CGCGCCCGAGGCAGGCTCGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPLFKNITLAQKLVALVAFFLAVVLLVGATGLAQLRAVSAAQREMYTDTVVPLRKVVDGGRQAAVHFRRMYPFILKTDAK
SREETLSLNQQSEQSVLDAIGLLRQDDGSAELRATGQKLADTWARYKASVARLQAAAQAGDAEAAMGELNASTDRLHVEV
RNLLLEAGKLQEQQARDETERVAASVDRTFRIVSALIAAGAVLGGLLGWRIIRSVLRQLGGDPAQATAIARQIADGDLRE
SFAAGAGDTSSLVHHLSAMRLQLAQVIGQVRQSADAVSQASVEISSGTNDLSARTEQQAAALEQTAASMEHLGSTSRQNA
DSARQANELAVNASTVAVRGGEVVAEVVQTMRGINDSSRKIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRLLAQRSAQAAREIKDLIGASVERVGQGSQLVDRAGTTMAEVVSAIQRVTGLVSEISAASGAQSDGVAQVSEAITVM
DQGTQQNAALVEQSAAAAQSMQQQAAHLVRAVDAFRI

Sequences:

>Translated_517_residues
MPLFKNITLAQKLVALVAFFLAVVLLVGATGLAQLRAVSAAQREMYTDTVVPLRKVVDGGRQAAVHFRRMYPFILKTDAK
SREETLSLNQQSEQSVLDAIGLLRQDDGSAELRATGQKLADTWARYKASVARLQAAAQAGDAEAAMGELNASTDRLHVEV
RNLLLEAGKLQEQQARDETERVAASVDRTFRIVSALIAAGAVLGGLLGWRIIRSVLRQLGGDPAQATAIARQIADGDLRE
SFAAGAGDTSSLVHHLSAMRLQLAQVIGQVRQSADAVSQASVEISSGTNDLSARTEQQAAALEQTAASMEHLGSTSRQNA
DSARQANELAVNASTVAVRGGEVVAEVVQTMRGINDSSRKIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRLLAQRSAQAAREIKDLIGASVERVGQGSQLVDRAGTTMAEVVSAIQRVTGLVSEISAASGAQSDGVAQVSEAITVM
DQGTQQNAALVEQSAAAAQSMQQQAAHLVRAVDAFRI
>Mature_516_residues
PLFKNITLAQKLVALVAFFLAVVLLVGATGLAQLRAVSAAQREMYTDTVVPLRKVVDGGRQAAVHFRRMYPFILKTDAKS
REETLSLNQQSEQSVLDAIGLLRQDDGSAELRATGQKLADTWARYKASVARLQAAAQAGDAEAAMGELNASTDRLHVEVR
NLLLEAGKLQEQQARDETERVAASVDRTFRIVSALIAAGAVLGGLLGWRIIRSVLRQLGGDPAQATAIARQIADGDLRES
FAAGAGDTSSLVHHLSAMRLQLAQVIGQVRQSADAVSQASVEISSGTNDLSARTEQQAAALEQTAASMEHLGSTSRQNAD
SARQANELAVNASTVAVRGGEVVAEVVQTMRGINDSSRKIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRLLAQRSAQAAREIKDLIGASVERVGQGSQLVDRAGTTMAEVVSAIQRVTGLVSEISAASGAQSDGVAQVSEAITVMD
QGTQQNAALVEQSAAAAQSMQQQAAHLVRAVDAFRI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=288, Percent_Identity=61.4583333333333, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1787690, Length=320, Percent_Identity=53.75, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1788195, Length=310, Percent_Identity=56.1290322580645, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI1788194, Length=347, Percent_Identity=48.9913544668588, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1789453, Length=252, Percent_Identity=44.4444444444444, Blast_Score=201, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 54354; Mature: 54223

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLFKNITLAQKLVALVAFFLAVVLLVGATGLAQLRAVSAAQREMYTDTVVPLRKVVDGG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RQAAVHFRRMYPFILKTDAKSREETLSLNQQSEQSVLDAIGLLRQDDGSAELRATGQKLA
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DTWARYKASVARLQAAAQAGDAEAAMGELNASTDRLHVEVRNLLLEAGKLQEQQARDETE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVAASVDRTFRIVSALIAAGAVLGGLLGWRIIRSVLRQLGGDPAQATAIARQIADGDLRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
SFAAGAGDTSSLVHHLSAMRLQLAQVIGQVRQSADAVSQASVEISSGTNDLSARTEQQAA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHH
ALEQTAASMEHLGSTSRQNADSARQANELAVNASTVAVRGGEVVAEVVQTMRGINDSSRK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCHHEEECCHHHHHHHHHHHHCCCCCHHH
IADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRLLAQRSAQAAREIKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IGASVERVGQGSQLVDRAGTTMAEVVSAIQRVTGLVSEISAASGAQSDGVAQVSEAITVM
HHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DQGTQQNAALVEQSAAAAQSMQQQAAHLVRAVDAFRI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]