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The map label for this gene is 120612085

Identifier: 120612085

GI number: 120612085

Start: 3790294

End: 3791508

Strand: Reverse

Name: 120612085

Synonym: Aave_3432

Alternate gene names: NA

Gene position: 3791508-3790294 (Counterclockwise)

Preceding gene: 120612086

Following gene: 120612083

Centisome position: 70.83

GC content: 68.31

Gene sequence:

>1215_bases
ATGCACCTTCCCGACCGGGCCGTTTTCGATGCCATCCTTGCCTGGATGGCCAATGGCCTGCTGGACCTGTCCTGGTGGGA
GATCGTCCTCTACACGCTCGTGACCACCCATATCACGATCGCCGCCGTGACGATCTTCCTGCACCGCGCCCAGGCGCACC
GCTCGGTGGACCTCGGCGCCGTCCCGTCGCACTTCTTCCGCTTCTGGCTGTGGGTGGGCACGGGCATGGTCACGAAGGAA
TGGGTGGCCGTCCACCGCAAGCACCACGCCAAGTGCGAGACCGCCGACGACCCCCACAGCCCGCAGACGCGCGGGCTGGA
TACCGTGATGTGGCGCGGCGCAGAGCTGTACCGCTCCGAGGCCGCCAATGCCGAGACCCTGGCCAAGTTCGGCCACGGCA
CGCCCGACGACTGGGTCGAGCGCAACGTCTACAGCCGCTTCGCCTGGCAGGGCGTGGGGCTGATGCTCATCATCAACGTG
CTGCTCTTCGGTGCCATCGGCGCGACGGTCTGGGCCGTGCAGATGCTCTGGATCCCGTTCTGGGCCGCAGGCGTCGTCAA
CGGCATCGGCCACTTCTGGGGCTATCGCAACTTCGAGGCACAGGATGCGAGCACCAATCTGGTGCCCTGGGGGCTCGTGA
TCGGCGGCGAAGAACTGCACAACAACCACCACACCTATCCCACCTCGGCCAAGTTCTCGGTCAAGCCCTATGAATTCGAC
GTGGGCTGGCTCTACATCAGCCTGATGCGCCGCGTGGGCTGGGCCACCGTCAGGAAGGTGCCGCCCAAGCTGCGCCTGGG
CGCCGTCAAGCCGGTGGCGGACGAGAAGACGCTCGAGGCCTTGATCGCCAACCGCTACGAGGTCATGGCCGGCTATGCGC
GCGGCGTGCGCCGCGCCTGCCGCGAGGAGATCGCCGCCCTCAAGGCCCGCAAGGCGGACGTGTCCGTGCTGCGTACCGCG
CGCCGCTGGCTGCACCGCGATGCCGAGAAGGTGCCCGCGCGCGCCCAGGAGCAGCTCGCCAGTGCCCGCGCCGCGCATCC
CGTGCTCGACACCATGGTCACGATGCGCGAGGAGTTGCGCCAGCTCTGGTTGAACACCTCGCAATCGCGCGAGCAGCTCA
CGGCCGACCTGCAGGCCTGGTGCCGTCGCGCCGAAGAGAGCGGAATCGCCGCCCTGCGGGATTTCTCGCTGCGGCTGCGG
GCCGCGCAGGCCTGA

Upstream 100 bases:

>100_bases
CGCGCGGTCTTGTGCAACTTCCCGGCCGCATCGGCTTCTAAAATCACTGAAGTGCCCTTCATCGGGCAGTTTTCCCGTCC
GCTTTCCTCAAAGGCTTCCC

Downstream 100 bases:

>100_bases
GCTGACTGGAGCCGGGGCGGGCTGCGGCAGCGGCCGGCACGACAGGCGGCGTTCGCCATCACCGTGCCGTGGTGGCATGG
ACCCCCGCCCGCTGGCCGTG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MHLPDRAVFDAILAWMANGLLDLSWWEIVLYTLVTTHITIAAVTIFLHRAQAHRSVDLGAVPSHFFRFWLWVGTGMVTKE
WVAVHRKHHAKCETADDPHSPQTRGLDTVMWRGAELYRSEAANAETLAKFGHGTPDDWVERNVYSRFAWQGVGLMLIINV
LLFGAIGATVWAVQMLWIPFWAAGVVNGIGHFWGYRNFEAQDASTNLVPWGLVIGGEELHNNHHTYPTSAKFSVKPYEFD
VGWLYISLMRRVGWATVRKVPPKLRLGAVKPVADEKTLEALIANRYEVMAGYARGVRRACREEIAALKARKADVSVLRTA
RRWLHRDAEKVPARAQEQLASARAAHPVLDTMVTMREELRQLWLNTSQSREQLTADLQAWCRRAEESGIAALRDFSLRLR
AAQA

Sequences:

>Translated_404_residues
MHLPDRAVFDAILAWMANGLLDLSWWEIVLYTLVTTHITIAAVTIFLHRAQAHRSVDLGAVPSHFFRFWLWVGTGMVTKE
WVAVHRKHHAKCETADDPHSPQTRGLDTVMWRGAELYRSEAANAETLAKFGHGTPDDWVERNVYSRFAWQGVGLMLIINV
LLFGAIGATVWAVQMLWIPFWAAGVVNGIGHFWGYRNFEAQDASTNLVPWGLVIGGEELHNNHHTYPTSAKFSVKPYEFD
VGWLYISLMRRVGWATVRKVPPKLRLGAVKPVADEKTLEALIANRYEVMAGYARGVRRACREEIAALKARKADVSVLRTA
RRWLHRDAEKVPARAQEQLASARAAHPVLDTMVTMREELRQLWLNTSQSREQLTADLQAWCRRAEESGIAALRDFSLRLR
AAQA
>Mature_404_residues
MHLPDRAVFDAILAWMANGLLDLSWWEIVLYTLVTTHITIAAVTIFLHRAQAHRSVDLGAVPSHFFRFWLWVGTGMVTKE
WVAVHRKHHAKCETADDPHSPQTRGLDTVMWRGAELYRSEAANAETLAKFGHGTPDDWVERNVYSRFAWQGVGLMLIINV
LLFGAIGATVWAVQMLWIPFWAAGVVNGIGHFWGYRNFEAQDASTNLVPWGLVIGGEELHNNHHTYPTSAKFSVKPYEFD
VGWLYISLMRRVGWATVRKVPPKLRLGAVKPVADEKTLEALIANRYEVMAGYARGVRRACREEIAALKARKADVSVLRTA
RRWLHRDAEKVPARAQEQLASARAAHPVLDTMVTMREELRQLWLNTSQSREQLTADLQAWCRRAEESGIAALRDFSLRLR
AAQA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45789; Mature: 45789

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00223 ANNEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLPDRAVFDAILAWMANGLLDLSWWEIVLYTLVTTHITIAAVTIFLHRAQAHRSVDLGA
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPSHFFRFWLWVGTGMVTKEWVAVHRKHHAKCETADDPHSPQTRGLDTVMWRGAELYRSE
CHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHH
AANAETLAKFGHGTPDDWVERNVYSRFAWQGVGLMLIINVLLFGAIGATVWAVQMLWIPF
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAAGVVNGIGHFWGYRNFEAQDASTNLVPWGLVIGGEELHNNHHTYPTSAKFSVKPYEFD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCEEEC
VGWLYISLMRRVGWATVRKVPPKLRLGAVKPVADEKTLEALIANRYEVMAGYARGVRRAC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
REEIAALKARKADVSVLRTARRWLHRDAEKVPARAQEQLASARAAHPVLDTMVTMREELR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLWLNTSQSREQLTADLQAWCRRAEESGIAALRDFSLRLRAAQA
HHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHLPDRAVFDAILAWMANGLLDLSWWEIVLYTLVTTHITIAAVTIFLHRAQAHRSVDLGA
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPSHFFRFWLWVGTGMVTKEWVAVHRKHHAKCETADDPHSPQTRGLDTVMWRGAELYRSE
CHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHH
AANAETLAKFGHGTPDDWVERNVYSRFAWQGVGLMLIINVLLFGAIGATVWAVQMLWIPF
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAAGVVNGIGHFWGYRNFEAQDASTNLVPWGLVIGGEELHNNHHTYPTSAKFSVKPYEFD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCEEEC
VGWLYISLMRRVGWATVRKVPPKLRLGAVKPVADEKTLEALIANRYEVMAGYARGVRRAC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
REEIAALKARKADVSVLRTARRWLHRDAEKVPARAQEQLASARAAHPVLDTMVTMREELR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLWLNTSQSREQLTADLQAWCRRAEESGIAALRDFSLRLRAAQA
HHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA