| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611392
Identifier: 120611392
GI number: 120611392
Start: 2994698
End: 2995600
Strand: Reverse
Name: 120611392
Synonym: Aave_2728
Alternate gene names: NA
Gene position: 2995600-2994698 (Counterclockwise)
Preceding gene: 120611393
Following gene: 120611391
Centisome position: 55.96
GC content: 66.45
Gene sequence:
>903_bases ATGGCGGCGCCACGCATGTCCCGGGCTGCGGCCCTTCTCCTGGCCGCGGCGCCCATCGTCGCGCTGGCAGTCATCGTTTC CGCCGCAGAGATCATCGCATCGATCGAGCGCTCGCCTAACGCCAGCCCGTGGCTGCGGCAGAACGCTGCGGCCGTGGCGA ACCTCGCGATCAACGTGGAGAGCAACGGCGAGACGACCGCATTCAACGGCTCATGCTGCTACGGCGTGCTGCAAATGAAC CAGGGCAACATCACGCGCTACGCTGGCGTGACGCCAGAGGAGTACCGCCGACAGTCTCTCCAACAGCAGGTCGATGCCTG GTCGGCGCTGACAACCGATGCCCTGCAATCGCGCGTGGTTCAGGACCTCCTGGCGCTGGGCACGTTCGATGGCCGTCCGG TCGATGGCAATCTCGTGCTCGCCTGCGTGCAGTTGGGGATCGGCAACTGCCGAACGATGCTTCGCGCCGGCCGTTGCTCC GGCTTTGCCGACAGCAACGGCACCACGATCTGCGGCATGGCCGACCGCATCGCCAGCGGTACCGCCGGAGGCAACCCGAC AGCACCAGGTGGAGGCGGAGGCAGCGGGAGCGGATCAGGCGGCGGCTCGGGGTGGCAGCCTGCTTTCGGCTCGTGTGTGC GAGACGCCGGTGGTGCATGCGTACCGGTGGCGGAATCCATCCAGCGAGGATTCGCGCGCGGATCAGGGCAGCAGATGGCA AGCGTCAAGACCGTGTCGATCGCCGTGGCGGTCGCCGCCTGCTTTCTCGTGGTGGGTTACGTGGTGATGGGCGTGCTGCA GCGGTTCGGTGCAGGCCAGATCTCGCTGGTCGATCTCAAGCGCTACACATTGGTCGCAGGCCTCACGCTGACGCTCGTAC TCGTCGCGCTCATGATCCTATGA
Upstream 100 bases:
>100_bases TACGCATTCGATGCGGGTGAAAGTCTGCTCCGACTGCGCGCCATCCAGTTCGGCAAGGTCGTGCCGGCCTGCAGCCGCTC GCTGCGCCTCGGCTGACGAC
Downstream 100 bases:
>100_bases CGGTCGCTCCCACTCGACTCGCCGCAGTGGCGCTCGCGCTTTGCCTGTGGATCCAGTGCGCCAGCGCAGGCCCCGAAACC TGCCTTCGCGGGCACAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAAPRMSRAAALLLAAAPIVALAVIVSAAEIIASIERSPNASPWLRQNAAAVANLAINVESNGETTAFNGSCCYGVLQMN QGNITRYAGVTPEEYRRQSLQQQVDAWSALTTDALQSRVVQDLLALGTFDGRPVDGNLVLACVQLGIGNCRTMLRAGRCS GFADSNGTTICGMADRIASGTAGGNPTAPGGGGGSGSGSGGGSGWQPAFGSCVRDAGGACVPVAESIQRGFARGSGQQMA SVKTVSIAVAVAACFLVVGYVVMGVLQRFGAGQISLVDLKRYTLVAGLTLTLVLVALMIL
Sequences:
>Translated_300_residues MAAPRMSRAAALLLAAAPIVALAVIVSAAEIIASIERSPNASPWLRQNAAAVANLAINVESNGETTAFNGSCCYGVLQMN QGNITRYAGVTPEEYRRQSLQQQVDAWSALTTDALQSRVVQDLLALGTFDGRPVDGNLVLACVQLGIGNCRTMLRAGRCS GFADSNGTTICGMADRIASGTAGGNPTAPGGGGGSGSGSGGGSGWQPAFGSCVRDAGGACVPVAESIQRGFARGSGQQMA SVKTVSIAVAVAACFLVVGYVVMGVLQRFGAGQISLVDLKRYTLVAGLTLTLVLVALMIL >Mature_299_residues AAPRMSRAAALLLAAAPIVALAVIVSAAEIIASIERSPNASPWLRQNAAAVANLAINVESNGETTAFNGSCCYGVLQMNQ GNITRYAGVTPEEYRRQSLQQQVDAWSALTTDALQSRVVQDLLALGTFDGRPVDGNLVLACVQLGIGNCRTMLRAGRCSG FADSNGTTICGMADRIASGTAGGNPTAPGGGGGSGSGSGGGSGWQPAFGSCVRDAGGACVPVAESIQRGFARGSGQQMAS VKTVSIAVAVAACFLVVGYVVMGVLQRFGAGQISLVDLKRYTLVAGLTLTLVLVALMIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30470; Mature: 30339
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPRMSRAAALLLAAAPIVALAVIVSAAEIIASIERSPNASPWLRQNAAAVANLAINVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEC SNGETTAFNGSCCYGVLQMNQGNITRYAGVTPEEYRRQSLQQQVDAWSALTTDALQSRVV CCCCEEEECCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDLLALGTFDGRPVDGNLVLACVQLGIGNCRTMLRAGRCSGFADSNGTTICGMADRIASG HHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCC TAGGNPTAPGGGGGSGSGSGGGSGWQPAFGSCVRDAGGACVPVAESIQRGFARGSGQQMA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCHHH SVKTVSIAVAVAACFLVVGYVVMGVLQRFGAGQISLVDLKRYTLVAGLTLTLVLVALMIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AAPRMSRAAALLLAAAPIVALAVIVSAAEIIASIERSPNASPWLRQNAAAVANLAINVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEC SNGETTAFNGSCCYGVLQMNQGNITRYAGVTPEEYRRQSLQQQVDAWSALTTDALQSRVV CCCCEEEECCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDLLALGTFDGRPVDGNLVLACVQLGIGNCRTMLRAGRCSGFADSNGTTICGMADRIASG HHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCC TAGGNPTAPGGGGGSGSGSGGGSGWQPAFGSCVRDAGGACVPVAESIQRGFARGSGQQMA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCHHH SVKTVSIAVAVAACFLVVGYVVMGVLQRFGAGQISLVDLKRYTLVAGLTLTLVLVALMIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA