| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611393
Identifier: 120611393
GI number: 120611393
Start: 2995605
End: 2996174
Strand: Reverse
Name: 120611393
Synonym: Aave_2729
Alternate gene names: NA
Gene position: 2996174-2995605 (Counterclockwise)
Preceding gene: 120611394
Following gene: 120611392
Centisome position: 55.97
GC content: 67.02
Gene sequence:
>570_bases ATGACGCCCTGGACCGCTCTTCCTGCCAGCTGCGTCGCGGCCATGGCGGCGGTGCTCGCTGCAGGTCAGGCCCGCGCACA GGAGATCACCGAGGTGACCTGGTCGCCGATGCGCGAAGTGGTGTTCCACAGCAGCAAATTCCCCTCCTCCGGCACGGAGG CGGACCGCCAAATACTGCGGAGCATCTGGGCCAGGGAATTGACCTCGACGCGCAAGTCCGCGGACGGGCAACCCCTTCCC GCGTTCGCCCTGGTCGGCGACGTGCAGCGCGGTGGCCGAAAGGTCGTGTTCTCGATGTTCAGCGCAGCCGGGACCGATCG ATGCGAAGACCCGGAGAACGGCGCACAGGTGACGGACATCTACTCGGTGTGCAGTCTGCGTGTGACGCCCTGGCCCATGC AGGGCCGCCAGGTCGCCGATCTGCCGGGGTACTGCATGATCTTCGGCACGCAGCGGGACAAGAGCCGCATCGAGTACGCA TTCGATGCGGGTGAAAGTCTGCTCCGACTGCGCGCCATCCAGTTCGGCAAGGTCGTGCCGGCCTGCAGCCGCTCGCTGCG CCTCGGCTGA
Upstream 100 bases:
>100_bases TGCTGGCCAGCGGGAAGCGGCTGGTGGGCGCCACGCCGCCCGAGCAGTTCCTCGCGGAGCTCGACAAGGGCGGACGGGCC GCGGCGAGAGGAGTGCCGCG
Downstream 100 bases:
>100_bases CGACATGGCGGCGCCACGCATGTCCCGGGCTGCGGCCCTTCTCCTGGCCGCGGCGCCCATCGTCGCGCTGGCAGTCATCG TTTCCGCCGCAGAGATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTPWTALPASCVAAMAAVLAAGQARAQEITEVTWSPMREVVFHSSKFPSSGTEADRQILRSIWARELTSTRKSADGQPLP AFALVGDVQRGGRKVVFSMFSAAGTDRCEDPENGAQVTDIYSVCSLRVTPWPMQGRQVADLPGYCMIFGTQRDKSRIEYA FDAGESLLRLRAIQFGKVVPACSRSLRLG
Sequences:
>Translated_189_residues MTPWTALPASCVAAMAAVLAAGQARAQEITEVTWSPMREVVFHSSKFPSSGTEADRQILRSIWARELTSTRKSADGQPLP AFALVGDVQRGGRKVVFSMFSAAGTDRCEDPENGAQVTDIYSVCSLRVTPWPMQGRQVADLPGYCMIFGTQRDKSRIEYA FDAGESLLRLRAIQFGKVVPACSRSLRLG >Mature_188_residues TPWTALPASCVAAMAAVLAAGQARAQEITEVTWSPMREVVFHSSKFPSSGTEADRQILRSIWARELTSTRKSADGQPLPA FALVGDVQRGGRKVVFSMFSAAGTDRCEDPENGAQVTDIYSVCSLRVTPWPMQGRQVADLPGYCMIFGTQRDKSRIEYAF DAGESLLRLRAIQFGKVVPACSRSLRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20604; Mature: 20473
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPWTALPASCVAAMAAVLAAGQARAQEITEVTWSPMREVVFHSSKFPSSGTEADRQILR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SIWARELTSTRKSADGQPLPAFALVGDVQRGGRKVVFSMFSAAGTDRCEDPENGAQVTDI HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH YSVCSLRVTPWPMQGRQVADLPGYCMIFGTQRDKSRIEYAFDAGESLLRLRAIQFGKVVP HHHHHCCCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ACSRSLRLG HHHHHCCCC >Mature Secondary Structure TPWTALPASCVAAMAAVLAAGQARAQEITEVTWSPMREVVFHSSKFPSSGTEADRQILR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SIWARELTSTRKSADGQPLPAFALVGDVQRGGRKVVFSMFSAAGTDRCEDPENGAQVTDI HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH YSVCSLRVTPWPMQGRQVADLPGYCMIFGTQRDKSRIEYAFDAGESLLRLRAIQFGKVVP HHHHHCCCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ACSRSLRLG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA