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The map label for this gene is yjbJ [H]

Identifier: 120611391

GI number: 120611391

Start: 2994123

End: 2994701

Strand: Reverse

Name: yjbJ [H]

Synonym: Aave_2727

Alternate gene names: 120611391

Gene position: 2994701-2994123 (Counterclockwise)

Preceding gene: 120611392

Following gene: 120611390

Centisome position: 55.95

GC content: 67.7

Gene sequence:

>579_bases
ATGACGGTCGCTCCCACTCGACTCGCCGCAGTGGCGCTCGCGCTTTGCCTGTGGATCCAGTGCGCCAGCGCAGGCCCCGA
AACCTGCCTTCGCGGGCACAGCCGCTCCGAACCCTGCCAGCGAATGCTGCAGGACTACTGGCGTCACGAAGCGGCCATCA
CTGCGATCGCCCGGCACTATGGTCTTGAGCCGGCATTGCTCAAAGCGCTCGTTGCCGTCGAAAGCGGCTACAACGCGGCG
GCTCGCTCGCCCGCCAATGCTCGTGGCCTGACCCAGGTGCTGCCCTCCACCGCCGCCGGCGTGGGCTTGCAGCAGCCCGA
ACAGAACCTGTACCGCCCGGAGCTCGCACTGGCGGCTGGCGCGGCGTACCTACGCCAGATGTGGTTCGAGTTCCGCGCGT
GGGATCTCGCGCTGGCTGCTTACAACGCCGGGCCCGGCGCCGTGCGCAAGCACGGTGGCATACCACCCTACCGAGAAACG
CAGGCCTACGTGCCGAAGGTCCTGGCCCTCTACCGGGAATTCGCCCTTGCCGAAACGCTGGCCGCGTCCCGCTCAATGCC
CCAAGGAAACACCCCATGA

Upstream 100 bases:

>100_bases
AGCGGTTCGGTGCAGGCCAGATCTCGCTGGTCGATCTCAAGCGCTACACATTGGTCGCAGGCCTCACGCTGACGCTCGTA
CTCGTCGCGCTCATGATCCT

Downstream 100 bases:

>100_bases
ACCTGCGCGCCTGCGCCTTGGCGGCCGCATCGCTCGCCCTATCTTGTGCTGCGACGGCGGCAGAGCCCATGGAGATCTCG
CAGACTCGAAGCGCGCTGCT

Product: lytic transglycosylase catalytic subunit

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTVAPTRLAAVALALCLWIQCASAGPETCLRGHSRSEPCQRMLQDYWRHEAAITAIARHYGLEPALLKALVAVESGYNAA
ARSPANARGLTQVLPSTAAGVGLQQPEQNLYRPELALAAGAAYLRQMWFEFRAWDLALAAYNAGPGAVRKHGGIPPYRET
QAYVPKVLALYREFALAETLAASRSMPQGNTP

Sequences:

>Translated_192_residues
MTVAPTRLAAVALALCLWIQCASAGPETCLRGHSRSEPCQRMLQDYWRHEAAITAIARHYGLEPALLKALVAVESGYNAA
ARSPANARGLTQVLPSTAAGVGLQQPEQNLYRPELALAAGAAYLRQMWFEFRAWDLALAAYNAGPGAVRKHGGIPPYRET
QAYVPKVLALYREFALAETLAASRSMPQGNTP
>Mature_191_residues
TVAPTRLAAVALALCLWIQCASAGPETCLRGHSRSEPCQRMLQDYWRHEAAITAIARHYGLEPALLKALVAVESGYNAAA
RSPANARGLTQVLPSTAAGVGLQQPEQNLYRPELALAAGAAYLRQMWFEFRAWDLALAAYNAGPGAVRKHGGIPPYRETQ
AYVPKVLALYREFALAETLAASRSMPQGNTP

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 20745; Mature: 20614

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAPTRLAAVALALCLWIQCASAGPETCLRGHSRSEPCQRMLQDYWRHEAAITAIARHY
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLEPALLKALVAVESGYNAAARSPANARGLTQVLPSTAAGVGLQQPEQNLYRPELALAAG
CCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHH
AAYLRQMWFEFRAWDLALAAYNAGPGAVRKHGGIPPYRETQAYVPKVLALYREFALAETL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AASRSMPQGNTP
HHHCCCCCCCCC
>Mature Secondary Structure 
TVAPTRLAAVALALCLWIQCASAGPETCLRGHSRSEPCQRMLQDYWRHEAAITAIARHY
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLEPALLKALVAVESGYNAAARSPANARGLTQVLPSTAAGVGLQQPEQNLYRPELALAAG
CCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHH
AAYLRQMWFEFRAWDLALAAYNAGPGAVRKHGGIPPYRETQAYVPKVLALYREFALAETL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AASRSMPQGNTP
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]