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The map label for this gene is 120611177

Identifier: 120611177

GI number: 120611177

Start: 2747191

End: 2748492

Strand: Reverse

Name: 120611177

Synonym: Aave_2508

Alternate gene names: NA

Gene position: 2748492-2747191 (Counterclockwise)

Preceding gene: 120611178

Following gene: 120611176

Centisome position: 51.35

GC content: 69.89

Gene sequence:

>1302_bases
ATGCATGCATGCATGCCGCGGCACGGGATATTGCGAGGGCGACTTGTCGCCGGGCGACGCTCACCGCATCATTGGGGACA
GAGAGCGAAAAAGCAGCGCCGCCCCACGAAGGTCTGCGGCCATCATCGACACCTGGGAGGAGCATTGCGCATGCTGGAAC
TGGAGCGTTTCTTTCTTCTGGACGGGGCCGACGGGCTGCCCGCAGGCGCCCTGCTCACCGGCAGCCACGATCCCGCGCTC
GTCGCTCTCTCGGTCGCTGTCGCGGTGCTGTCCTCCACCCTCGCGCTCTACCTCTCCGGCCAGGCCCGCGGCACCCAGAT
CACGCTGTCGCGCGTGCTCGCCCTCACCAGTGCCGGCGTGGCGCTCGGCGCGGGCATCTGGGCCATGCATTTCATCGGGA
TGCTGTCATTCACGCTGTGCGCCGCCGTGCATTACGACGTGGCGCTCACGATGCTGTCGATGTTTCCTGGAATGTGCGCC
TCCTGGCTGGCGCTGTCGCTGCTGGCTCGCCCCGAGGTGCAGCCGCGCCAGCTCGTGCTGGGCGGCGTGCTCGTGGGCGC
CGGTATCGGCGCCATGCACTACATGGGCATGGCGGCCATGCTCATGGCCCCTCTGCTGCGGTACGACCCGCTGTGGTTCA
TCGCCTCGCTGGTGGTGGCCGTGGCGCTGGCCAACGCGGCGCTGTGGGTGCGCTTCATGCTCAAGCGCCGCCTCGGCATG
GCGCCATGGAAGGCCAACCTGCTCGGCGGCGCCATCATGGGCTGCGCGATTTCGGGCATGCACTACACCGCCATGGCCGC
GGCCCGCTTCGTCGGCACGGCCGAGCCGGGCGGCGGCGGGGGGCGCGAGTGGGTGCAGATGATGGCGATCACCGTGACCC
TCGTGACCGCCTGCGTGGGGCTGTTCGCCGGCGCGGTGAACGGATTCATCCTCTACCGCGATCTCTACCGCCAGGCGCGG
CGCAGCGAATCGCGCCTGCGCGCGCTGGTGGACACGGCCGTGGACGGCATCATCACCATCGACGGGCGCGGCATCATCCA
GAGCTTCAACCAGTCGGCCGAGCGCATCTTCGGCTGGACCGCCGGCGACGTGCTGGGCCGCAACATCCGCATGCTGATGC
CTCGCCCGACAGCGAAGCCCACGACGGCTACCTCCAGCGCTACCTGGCCACCGGCGAGGCCCGCATCATCGGCACCGGCC
GGGAAGTGGTGGGCCTGCACCGCGACGGCAGCGCCCTGCCGCTGCGCCTGTCCATCGGCCGCGCCAACGCGCCGGACGGC
CCGCTGTTCGTCGGCTTCCTGA

Upstream 100 bases:

>100_bases
CAGGCCGCGGCCTGAGCCTTCCCTTCGCCCTTCCCGACCATTCACGCCCGCCCCCTTAGGCCCGGCGGCTGACGCGGACC
TTGCCGCGTCGCGTGCATGC

Downstream 100 bases:

>100_bases
TCGACCTGCGCGGCGTGAAGGAGGCCGAGATGCGCCTGGGCATCGCCGCCAGCGTGTTCGAGCACAGCTACGAGGCCGTG
CTGATCCTCGACTCGGACCA

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MHACMPRHGILRGRLVAGRRSPHHWGQRAKKQRRPTKVCGHHRHLGGALRMLELERFFLLDGADGLPAGALLTGSHDPAL
VALSVAVAVLSSTLALYLSGQARGTQITLSRVLALTSAGVALGAGIWAMHFIGMLSFTLCAAVHYDVALTMLSMFPGMCA
SWLALSLLARPEVQPRQLVLGGVLVGAGIGAMHYMGMAAMLMAPLLRYDPLWFIASLVVAVALANAALWVRFMLKRRLGM
APWKANLLGGAIMGCAISGMHYTAMAAARFVGTAEPGGGGGREWVQMMAITVTLVTACVGLFAGAVNGFILYRDLYRQAR
RSESRLRALVDTAVDGIITIDGRGIIQSFNQSAERIFGWTAGDVLGRNIRMLMPRPTAKPTTATSSATWPPARPASSAPA
GKWWACTATAAPCRCACPSAAPTRRTARCSSAS

Sequences:

>Translated_433_residues
MHACMPRHGILRGRLVAGRRSPHHWGQRAKKQRRPTKVCGHHRHLGGALRMLELERFFLLDGADGLPAGALLTGSHDPAL
VALSVAVAVLSSTLALYLSGQARGTQITLSRVLALTSAGVALGAGIWAMHFIGMLSFTLCAAVHYDVALTMLSMFPGMCA
SWLALSLLARPEVQPRQLVLGGVLVGAGIGAMHYMGMAAMLMAPLLRYDPLWFIASLVVAVALANAALWVRFMLKRRLGM
APWKANLLGGAIMGCAISGMHYTAMAAARFVGTAEPGGGGGREWVQMMAITVTLVTACVGLFAGAVNGFILYRDLYRQAR
RSESRLRALVDTAVDGIITIDGRGIIQSFNQSAERIFGWTAGDVLGRNIRMLMPRPTAKPTTATSSATWPPARPASSAPA
GKWWACTATAAPCRCACPSAAPTRRTARCSSAS
>Mature_433_residues
MHACMPRHGILRGRLVAGRRSPHHWGQRAKKQRRPTKVCGHHRHLGGALRMLELERFFLLDGADGLPAGALLTGSHDPAL
VALSVAVAVLSSTLALYLSGQARGTQITLSRVLALTSAGVALGAGIWAMHFIGMLSFTLCAAVHYDVALTMLSMFPGMCA
SWLALSLLARPEVQPRQLVLGGVLVGAGIGAMHYMGMAAMLMAPLLRYDPLWFIASLVVAVALANAALWVRFMLKRRLGM
APWKANLLGGAIMGCAISGMHYTAMAAARFVGTAEPGGGGGREWVQMMAITVTLVTACVGLFAGAVNGFILYRDLYRQAR
RSESRLRALVDTAVDGIITIDGRGIIQSFNQSAERIFGWTAGDVLGRNIRMLMPRPTAKPTTATSSATWPPARPASSAPA
GKWWACTATAAPCRCACPSAAPTRRTARCSSAS

Specific function: Unknown

COG id: COG3300

COG function: function code T; MHYT domain (predicted integral membrane sensor domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 45996; Mature: 45996

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: PS50924 MHYT ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHACMPRHGILRGRLVAGRRSPHHWGQRAKKQRRPTKVCGHHRHLGGALRMLELERFFLL
CCCCCCCCCCHHCEEECCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHEE
DGADGLPAGALLTGSHDPALVALSVAVAVLSSTLALYLSGQARGTQITLSRVLALTSAGV
ECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCH
ALGAGIWAMHFIGMLSFTLCAAVHYDVALTMLSMFPGMCASWLALSLLARPEVQPRQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GGVLVGAGIGAMHYMGMAAMLMAPLLRYDPLWFIASLVVAVALANAALWVRFMLKRRLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APWKANLLGGAIMGCAISGMHYTAMAAARFVGTAEPGGGGGREWVQMMAITVTLVTACVG
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFAGAVNGFILYRDLYRQARRSESRLRALVDTAVDGIITIDGRGIIQSFNQSAERIFGWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCC
AGDVLGRNIRMLMPRPTAKPTTATSSATWPPARPASSAPAGKWWACTATAAPCRCACPSA
HHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
APTRRTARCSSAS
CCCCHHCCCCCCC
>Mature Secondary Structure
MHACMPRHGILRGRLVAGRRSPHHWGQRAKKQRRPTKVCGHHRHLGGALRMLELERFFLL
CCCCCCCCCCHHCEEECCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHEE
DGADGLPAGALLTGSHDPALVALSVAVAVLSSTLALYLSGQARGTQITLSRVLALTSAGV
ECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCH
ALGAGIWAMHFIGMLSFTLCAAVHYDVALTMLSMFPGMCASWLALSLLARPEVQPRQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GGVLVGAGIGAMHYMGMAAMLMAPLLRYDPLWFIASLVVAVALANAALWVRFMLKRRLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APWKANLLGGAIMGCAISGMHYTAMAAARFVGTAEPGGGGGREWVQMMAITVTLVTACVG
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFAGAVNGFILYRDLYRQARRSESRLRALVDTAVDGIITIDGRGIIQSFNQSAERIFGWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCC
AGDVLGRNIRMLMPRPTAKPTTATSSATWPPARPASSAPAGKWWACTATAAPCRCACPSA
HHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
APTRRTARCSSAS
CCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]