Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611160

Identifier: 120611160

GI number: 120611160

Start: 2723795

End: 2724874

Strand: Reverse

Name: 120611160

Synonym: Aave_2489

Alternate gene names: NA

Gene position: 2724874-2723795 (Counterclockwise)

Preceding gene: 120611162

Following gene: 120611159

Centisome position: 50.91

GC content: 64.44

Gene sequence:

>1080_bases
ATGCCGTCGCTCGATTTTTCCAGGGAAGAAAGAGGCTTCGAAGCCTTCTACGAGCAGGAGCTGCCCGCACTGCAATATGC
CTGCGCTTCCTACATCGCCCTGCTGCAGTCCATCCTCTCGCGCACACCCCACCTGGACATCACCAAGGTGGAAGGCCGGG
TCAAGGACCGTCTGGAATGTATCGCGAAGTTCTCCCGCAAATACCGTGCGGTGCTGGAAGAAAGCAACACTCCCTATGAG
ATCCGGCACTACATCACCGACCTGATCGGGGTGCGGGTGGTCTGCCTCTACGAGGACGAACTGGAAAAAGTGGCCCAGGC
CGTGCGGTCGCACTTCGACGTGATCGACGTGACCGACAAGGTGTCGGCCATGGAAAGCACCGAGGGCTCCTTCGGCTACA
AGGGCCTGCACCTGGATCTGCGCCTCAACGCCGCCCAGGCCGGCCTGCCGGAGCATGCCGCCTACGCCGCACAGCCGTTC
GAACTGCAGGTCCGCACCATCATCCAGGACTCCTGGAGCGTGCTGGACCACAAGATCAAGTACAAGAAAGCCATTCCGGG
CCAGCTCAAGCGCCGCATCAACGTGCTCTCGGCCCTGTTCGAGCTGGCCGACCGCGAATTCCGCCAGATCCGCGACGAAA
CCGAGGCCGGGCTGCGGCATGCCCCGGACGAAACCGAAGCCCCGGACGCGGCCGAGCCGGAGGCCGCCGCGGCCGGGCCG
CAGGAAGAGCGGCCGGCAGCGCCCGGCAGCGAGCTCAACGCCTTCACCTTCCTGAAGATCGCCAACCATTTCTTCAAGGA
CAGCGATTTCGATCCACGCAAGGTGGACCTGTTCGTGGCGGACATCCGGGGATGGGCGCCCGGCATCACCCGCGCGCGCT
TCAACACCCTGCTGCGGGCCACGCTGGGCACCGTGAAGCGCTACAAGCAGCACTTCGAGGAAGCCAACCCGCAGACCAGC
TTCAACGCGTACACCGTGATACGGCACTGCCTCTACCTGGGCGACCGCACCACCTTCCGGCGGGCGCTGCGCAACAGTTC
GCGCGAGGCGTTCGAAGCGTGGCTGCGCGACCACGGATGA

Upstream 100 bases:

>100_bases
ATCGCAGCACCCACCCGCCGGCAGGCGGTATCCTTCGCCCTGCGGACGGGGAACCGCCACCGCCGCGCGCCGCCTTCTTT
TCGGTACTTTTGCCTTTTTC

Downstream 100 bases:

>100_bases
CCTCTTTCCGGGCAAAAAGGCGCACCGGCGGCGTGGTTACCTCAGCTTACAGCTACTGAAACCATAGCACCCCTTCTTTA
TCGGACGGGCATCCAGGGTT

Product: RelA/SpoT domain-containing protein

Products: NA

Alternate protein names: RelA/SpoT Domain Protein; GTP Pyrophosphokinase; Region Found In RelA / SpoT Proteins; RelA/SpoT; Rela/Spot Domain Protein

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MPSLDFSREERGFEAFYEQELPALQYACASYIALLQSILSRTPHLDITKVEGRVKDRLECIAKFSRKYRAVLEESNTPYE
IRHYITDLIGVRVVCLYEDELEKVAQAVRSHFDVIDVTDKVSAMESTEGSFGYKGLHLDLRLNAAQAGLPEHAAYAAQPF
ELQVRTIIQDSWSVLDHKIKYKKAIPGQLKRRINVLSALFELADREFRQIRDETEAGLRHAPDETEAPDAAEPEAAAAGP
QEERPAAPGSELNAFTFLKIANHFFKDSDFDPRKVDLFVADIRGWAPGITRARFNTLLRATLGTVKRYKQHFEEANPQTS
FNAYTVIRHCLYLGDRTTFRRALRNSSREAFEAWLRDHG

Sequences:

>Translated_359_residues
MPSLDFSREERGFEAFYEQELPALQYACASYIALLQSILSRTPHLDITKVEGRVKDRLECIAKFSRKYRAVLEESNTPYE
IRHYITDLIGVRVVCLYEDELEKVAQAVRSHFDVIDVTDKVSAMESTEGSFGYKGLHLDLRLNAAQAGLPEHAAYAAQPF
ELQVRTIIQDSWSVLDHKIKYKKAIPGQLKRRINVLSALFELADREFRQIRDETEAGLRHAPDETEAPDAAEPEAAAAGP
QEERPAAPGSELNAFTFLKIANHFFKDSDFDPRKVDLFVADIRGWAPGITRARFNTLLRATLGTVKRYKQHFEEANPQTS
FNAYTVIRHCLYLGDRTTFRRALRNSSREAFEAWLRDHG
>Mature_358_residues
PSLDFSREERGFEAFYEQELPALQYACASYIALLQSILSRTPHLDITKVEGRVKDRLECIAKFSRKYRAVLEESNTPYEI
RHYITDLIGVRVVCLYEDELEKVAQAVRSHFDVIDVTDKVSAMESTEGSFGYKGLHLDLRLNAAQAGLPEHAAYAAQPFE
LQVRTIIQDSWSVLDHKIKYKKAIPGQLKRRINVLSALFELADREFRQIRDETEAGLRHAPDETEAPDAAEPEAAAAGPQ
EERPAAPGSELNAFTFLKIANHFFKDSDFDPRKVDLFVADIRGWAPGITRARFNTLLRATLGTVKRYKQHFEEANPQTSF
NAYTVIRHCLYLGDRTTFRRALRNSSREAFEAWLRDHG

Specific function: Unknown

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40954; Mature: 40822

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLDFSREERGFEAFYEQELPALQYACASYIALLQSILSRTPHLDITKVEGRVKDRLEC
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH
IAKFSRKYRAVLEESNTPYEIRHYITDLIGVRVVCLYEDELEKVAQAVRSHFDVIDVTDK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCEEEHHHH
VSAMESTEGSFGYKGLHLDLRLNAAQAGLPEHAAYAAQPFELQVRTIIQDSWSVLDHKIK
HHHHHCCCCCCCCCEEEEEEEECHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YKKAIPGQLKRRINVLSALFELADREFRQIRDETEAGLRHAPDETEAPDAAEPEAAAAGP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
QEERPAAPGSELNAFTFLKIANHFFKDSDFDPRKVDLFVADIRGWAPGITRARFNTLLRA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHH
TLGTVKRYKQHFEEANPQTSFNAYTVIRHCLYLGDRTTFRRALRNSSREAFEAWLRDHG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PSLDFSREERGFEAFYEQELPALQYACASYIALLQSILSRTPHLDITKVEGRVKDRLEC
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH
IAKFSRKYRAVLEESNTPYEIRHYITDLIGVRVVCLYEDELEKVAQAVRSHFDVIDVTDK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCEEEHHHH
VSAMESTEGSFGYKGLHLDLRLNAAQAGLPEHAAYAAQPFELQVRTIIQDSWSVLDHKIK
HHHHHCCCCCCCCCEEEEEEEECHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YKKAIPGQLKRRINVLSALFELADREFRQIRDETEAGLRHAPDETEAPDAAEPEAAAAGP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
QEERPAAPGSELNAFTFLKIANHFFKDSDFDPRKVDLFVADIRGWAPGITRARFNTLLRA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHH
TLGTVKRYKQHFEEANPQTSFNAYTVIRHCLYLGDRTTFRRALRNSSREAFEAWLRDHG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA