Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yfiH [C]
Identifier: 120611146
GI number: 120611146
Start: 2706631
End: 2707440
Strand: Direct
Name: yfiH [C]
Synonym: Aave_2475
Alternate gene names: 120611146
Gene position: 2706631-2707440 (Clockwise)
Preceding gene: 120611145
Following gene: 120611148
Centisome position: 50.57
GC content: 76.3
Gene sequence:
>810_bases TTGCCGCCCGAGGTTGCTTCCCTGCCGGAAGGCTGGCTGCGGCCCGACTGGCCCGCGCCCGCCCACGTGCACGCGGTGTG CACGGCACGGCCGGGCGGCGTGAGCCGGGGCGCCTGGTCCGCGTTGAACCTGGGCGACCACGTCGGCGACGATCCGGATG CCGTCCGGGCCAACCGGCAGCACCTGCGCGCCCGCCTGGCGGACCTCGGTGGTGGGGCCGCGGTGGCTCCGACCTTCCTG CGGCAGGTGCACGGAACGGCCGTGGCGGACCTGGACCGCGGCGAGCCGGACGGCACGGAGGCCGACGCCTGCATCGCCCG CCTGCCGGGCCGGGCCTGCACCATCATGGTCGCGGACTGCCTGCCCGTGCTGCTGACCGACCGCCGGGGTTCCGCCGTGG CGGCAGCGCACGCCGGCTGGCGCGGCCTGGCCGGTGGCGTGCTGGAGCAGGCGCTCGCGCGCCTGGATGCGGAAGGCGGC GTGCTGGCGTGGCTGGGCCCGTGCATCGGTCCGACCGCCTTCGAGGTGGGCGAGGAGGTCCGGGAGGCGTTCTGCGCACA GGATGCCGGGGCGGGCACGCATTTTTCCCCGCAGAGCGGGGGCAAGTACCTGGCCGACCTGCCCGGACTGGCACGGCGGC GGCTCGGCGCGTTGGGCGTGGCGGGCGTGTGGGGCAACGACGGGGGCGACGGCTGGTGCACCGTGCGCCAGGCCTCACGG TTCTTTTCGCACCGCGCCTCCATGCAGCGGTCCGGCAGTACCGGCGGGCGGTTCGCCGCCTGCATCTGGCTCGGATCGCG CGGCGGCTGA
Upstream 100 bases:
>100_bases GGGCTGCCGCGCACCATGGCGGCCTGGGAGGCCGCGTCCGCGCTGCCGGCATTCCAGGCGGCCCATCCCTCCGCATGCCC CGATGCCGGGGGCTGACGCC
Downstream 100 bases:
>100_bases GGCCGCGCCCGCCGGCGGCGCTTCCCGGCCCGCACGGTGCGCGGCCTCTTCCCCCTCGCGCTGCTCCCTCTCCCGCAGGG CGCGCTTGCGGGCCGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQHLRARLADLGGGAAVAPTFL RQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADCLPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGG VLAWLGPCIGPTAFEVGEEVREAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR FFSHRASMQRSGSTGGRFAACIWLGSRGG
Sequences:
>Translated_269_residues MPPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQHLRARLADLGGGAAVAPTFL RQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADCLPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGG VLAWLGPCIGPTAFEVGEEVREAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR FFSHRASMQRSGSTGGRFAACIWLGSRGG >Mature_268_residues PPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQHLRARLADLGGGAAVAPTFLR QVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADCLPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGGV LAWLGPCIGPTAFEVGEEVREAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASRF FSHRASMQRSGSTGGRFAACIWLGSRGG
Specific function: Unknown
COG id: COG1496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0124 family [H]
Homologues:
Organism=Escherichia coli, GI1788945, Length=254, Percent_Identity=48.4251968503937, Blast_Score=204, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003730 - InterPro: IPR011324 [H]
Pfam domain/function: PF02578 Cu-oxidase_4 [H]
EC number: NA
Molecular weight: Translated: 27779; Mature: 27647
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQ CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHH HLRARLADLGGGAAVAPTFLRQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADC HHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEHHHH LPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGGVLAWLGPCIGPTAFEVGEEV HHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHH REAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR HHHHHHCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCEEEEECCCCCCCCEEHHHHHHH FFSHRASMQRSGSTGGRFAACIWLGSRGG HHHHHHHHHHCCCCCCCEEEEEEECCCCC >Mature Secondary Structure PPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQ CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHH HLRARLADLGGGAAVAPTFLRQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADC HHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEHHHH LPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGGVLAWLGPCIGPTAFEVGEEV HHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHH REAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR HHHHHHCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCEEEEECCCCCCCCEEHHHHHHH FFSHRASMQRSGSTGGRFAACIWLGSRGG HHHHHHHHHHCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 8097014 [H]