Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yfiH [C]

Identifier: 120611146

GI number: 120611146

Start: 2706631

End: 2707440

Strand: Direct

Name: yfiH [C]

Synonym: Aave_2475

Alternate gene names: 120611146

Gene position: 2706631-2707440 (Clockwise)

Preceding gene: 120611145

Following gene: 120611148

Centisome position: 50.57

GC content: 76.3

Gene sequence:

>810_bases
TTGCCGCCCGAGGTTGCTTCCCTGCCGGAAGGCTGGCTGCGGCCCGACTGGCCCGCGCCCGCCCACGTGCACGCGGTGTG
CACGGCACGGCCGGGCGGCGTGAGCCGGGGCGCCTGGTCCGCGTTGAACCTGGGCGACCACGTCGGCGACGATCCGGATG
CCGTCCGGGCCAACCGGCAGCACCTGCGCGCCCGCCTGGCGGACCTCGGTGGTGGGGCCGCGGTGGCTCCGACCTTCCTG
CGGCAGGTGCACGGAACGGCCGTGGCGGACCTGGACCGCGGCGAGCCGGACGGCACGGAGGCCGACGCCTGCATCGCCCG
CCTGCCGGGCCGGGCCTGCACCATCATGGTCGCGGACTGCCTGCCCGTGCTGCTGACCGACCGCCGGGGTTCCGCCGTGG
CGGCAGCGCACGCCGGCTGGCGCGGCCTGGCCGGTGGCGTGCTGGAGCAGGCGCTCGCGCGCCTGGATGCGGAAGGCGGC
GTGCTGGCGTGGCTGGGCCCGTGCATCGGTCCGACCGCCTTCGAGGTGGGCGAGGAGGTCCGGGAGGCGTTCTGCGCACA
GGATGCCGGGGCGGGCACGCATTTTTCCCCGCAGAGCGGGGGCAAGTACCTGGCCGACCTGCCCGGACTGGCACGGCGGC
GGCTCGGCGCGTTGGGCGTGGCGGGCGTGTGGGGCAACGACGGGGGCGACGGCTGGTGCACCGTGCGCCAGGCCTCACGG
TTCTTTTCGCACCGCGCCTCCATGCAGCGGTCCGGCAGTACCGGCGGGCGGTTCGCCGCCTGCATCTGGCTCGGATCGCG
CGGCGGCTGA

Upstream 100 bases:

>100_bases
GGGCTGCCGCGCACCATGGCGGCCTGGGAGGCCGCGTCCGCGCTGCCGGCATTCCAGGCGGCCCATCCCTCCGCATGCCC
CGATGCCGGGGGCTGACGCC

Downstream 100 bases:

>100_bases
GGCCGCGCCCGCCGGCGGCGCTTCCCGGCCCGCACGGTGCGCGGCCTCTTCCCCCTCGCGCTGCTCCCTCTCCCGCAGGG
CGCGCTTGCGGGCCGGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQHLRARLADLGGGAAVAPTFL
RQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADCLPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGG
VLAWLGPCIGPTAFEVGEEVREAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR
FFSHRASMQRSGSTGGRFAACIWLGSRGG

Sequences:

>Translated_269_residues
MPPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQHLRARLADLGGGAAVAPTFL
RQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADCLPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGG
VLAWLGPCIGPTAFEVGEEVREAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR
FFSHRASMQRSGSTGGRFAACIWLGSRGG
>Mature_268_residues
PPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQHLRARLADLGGGAAVAPTFLR
QVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADCLPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGGV
LAWLGPCIGPTAFEVGEEVREAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASRF
FSHRASMQRSGSTGGRFAACIWLGSRGG

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=254, Percent_Identity=48.4251968503937, Blast_Score=204, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27779; Mature: 27647

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQ
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHH
HLRARLADLGGGAAVAPTFLRQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADC
HHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEHHHH
LPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGGVLAWLGPCIGPTAFEVGEEV
HHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHH
REAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR
HHHHHHCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCEEEEECCCCCCCCEEHHHHHHH
FFSHRASMQRSGSTGGRFAACIWLGSRGG
HHHHHHHHHHCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
PPEVASLPEGWLRPDWPAPAHVHAVCTARPGGVSRGAWSALNLGDHVGDDPDAVRANRQ
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHH
HLRARLADLGGGAAVAPTFLRQVHGTAVADLDRGEPDGTEADACIARLPGRACTIMVADC
HHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEHHHH
LPVLLTDRRGSAVAAAHAGWRGLAGGVLEQALARLDAEGGVLAWLGPCIGPTAFEVGEEV
HHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHH
REAFCAQDAGAGTHFSPQSGGKYLADLPGLARRRLGALGVAGVWGNDGGDGWCTVRQASR
HHHHHHCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCEEEEECCCCCCCCEEHHHHHHH
FFSHRASMQRSGSTGGRFAACIWLGSRGG
HHHHHHHHHHCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 8097014 [H]