Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611143
Identifier: 120611143
GI number: 120611143
Start: 2704603
End: 2705151
Strand: Reverse
Name: 120611143
Synonym: Aave_2472
Alternate gene names: NA
Gene position: 2705151-2704603 (Counterclockwise)
Preceding gene: 120611144
Following gene: 120611142
Centisome position: 50.54
GC content: 66.85
Gene sequence:
>549_bases ATGACCACCCGCAGGCCGATCAAGCACTGCCGTGAATGCGGGGCCGCCGTGGAGTACCGCGTGCCCGACGACGGCGACAC CAAGCTGCGCGCCGTCTGCCCCGCTTGCCACACCATCCACTATGAAAACCCGCTCAACGTGGTCGGCACGGTGCCCGCGA TGGGGAACAAGGTGCTGCTGTGCAAGCGCAACATCGAGCCCCGCTGGGGCAAGTGGACGCTGCCGGCAGGCTTCATGGAG CTGAACGAGACGACCGCCGAGGGCGCGGCCCGCGAAACCGACGAGGAGGCCGGCGCGCAGATCACCATGGGCCCGCTCTT CTCGGTGCTCAACGTGCCGCGCGTGGGGCAGGTGCACCTGTTCTACCTCGCCCGCCTGGAGAGCGACCAGTTCGACCCCG GGTACGAGACCATCGAGGCCCGGCTTTTCGCGGAAGACGAGATCCCGTGGGACGAGATCGCGTTCCGCACGGTCAAGGTG ACGCTCGAGAAATACTTCGCCGACCGCCGCTCGGGCGCTTTCGGCATGCACTGCGTCGATATCGATTGA
Upstream 100 bases:
>100_bases TCACCGGCACGCCCGAAGGCGTGGGCGCGGTGGCGCGCGGCGACGTGCTGGAAGGCGGCGTCGACGGACTGGGCTCCCTG CGCGTGGAAATCGCCTGAAC
Downstream 100 bases:
>100_bases CCCACCCGGGCCTTGCGGCCCGGTATCCCGGACACCATGACCGATGACCTGCAGCGCCTGCGCGCTGGCGACCTCGCGGG TGCGCGCGTGCTGCGCATCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; Related Nudix Hydrolase; Mutator MutT Protein; MutT/NUDIX Family Protein; Nudix Hydrolase MutT Family; Nudix/Mutt Family Protein; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTTRRPIKHCRECGAAVEYRVPDDGDTKLRAVCPACHTIHYENPLNVVGTVPAMGNKVLLCKRNIEPRWGKWTLPAGFME LNETTAEGAARETDEEAGAQITMGPLFSVLNVPRVGQVHLFYLARLESDQFDPGYETIEARLFAEDEIPWDEIAFRTVKV TLEKYFADRRSGAFGMHCVDID
Sequences:
>Translated_182_residues MTTRRPIKHCRECGAAVEYRVPDDGDTKLRAVCPACHTIHYENPLNVVGTVPAMGNKVLLCKRNIEPRWGKWTLPAGFME LNETTAEGAARETDEEAGAQITMGPLFSVLNVPRVGQVHLFYLARLESDQFDPGYETIEARLFAEDEIPWDEIAFRTVKV TLEKYFADRRSGAFGMHCVDID >Mature_181_residues TTRRPIKHCRECGAAVEYRVPDDGDTKLRAVCPACHTIHYENPLNVVGTVPAMGNKVLLCKRNIEPRWGKWTLPAGFMEL NETTAEGAARETDEEAGAQITMGPLFSVLNVPRVGQVHLFYLARLESDQFDPGYETIEARLFAEDEIPWDEIAFRTVKVT LEKYFADRRSGAFGMHCVDID
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20503; Mature: 20371
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRRPIKHCRECGAAVEYRVPDDGDTKLRAVCPACHTIHYENPLNVVGTVPAMGNKVLL CCCCHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHEEECCCCCCEEECCCCCCCEEEE CKRNIEPRWGKWTLPAGFMELNETTAEGAARETDEEAGAQITMGPLFSVLNVPRVGQVHL EECCCCCCCCEEECCCCHHECCCHHHCCCCCCCHHHCCCEEEHHHHHHHHCCCCCCCEEE FYLARLESDQFDPGYETIEARLFAEDEIPWDEIAFRTVKVTLEKYFADRRSGAFGMHCVD EEEEECCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE ID CC >Mature Secondary Structure TTRRPIKHCRECGAAVEYRVPDDGDTKLRAVCPACHTIHYENPLNVVGTVPAMGNKVLL CCCHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHEEECCCCCCEEECCCCCCCEEEE CKRNIEPRWGKWTLPAGFMELNETTAEGAARETDEEAGAQITMGPLFSVLNVPRVGQVHL EECCCCCCCCEEECCCCHHECCCHHHCCCCCCCHHHCCCEEEHHHHHHHHCCCCCCCEEE FYLARLESDQFDPGYETIEARLFAEDEIPWDEIAFRTVKVTLEKYFADRRSGAFGMHCVD EEEEECCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE ID CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA