Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611137
Identifier: 120611137
GI number: 120611137
Start: 2695386
End: 2696351
Strand: Direct
Name: 120611137
Synonym: Aave_2466
Alternate gene names: NA
Gene position: 2695386-2696351 (Clockwise)
Preceding gene: 120611135
Following gene: 120611139
Centisome position: 50.35
GC content: 70.39
Gene sequence:
>966_bases ATGCGATTGAAATCCTGCGCGGCCGCGGCGCTGCTGGCCCTGTCGGGCGCCGCCTCGGCCGCCTGGCCCGACAAGCCCAT CACCCTCGTCGTTCCCTTTCCCCCGGGCCAGGCCACGGACATCTTCGCGCGCGCCCTGGCGGAGAAGCTCGGCGCGCGCC TCGGCCAGCCGCTGGTGGTGGACAACAAGGCCGGTGCCGGCAGCAACATCGGCACCGAGCAGGTGGTGCGCTCGAAGCCC GACGGCTACACCCTGGTGATGGCGGGCAGCGCGATGGCGGTGAACCAGACGCTCTACCGCAAGGTGAATTTCGACCCGCG CAAGGACCTGCAGGGCATCAGCCTGGTCGCCAAGGTGCCTCTGGTGTTCCTGGCCCATCCGGGGTCCGGCATCCGCAGCA TGCAGAATCTGGTGGCCCGGGCACGGGCCGAGCCCGGCAAGCTGAGCTATGCGAGCGCGGGCATCGGCGGCACGCAGCAC CTGAGCGCCGAGATGGTGAAGGCGCGCGCCCGCATCGAGATCGAACACATTCCCTACAAGGGCAGCGGTCCCGCGCAGGC CGACTTCCTGGGCGGGCAGGTGCCGCTGATGGTGGATTCGGTCACGGCGGGCCTGGCGAACATCCAGGCCGGCAAGGCCG TGCCGCTGGGCGTGACCTCCGCCACGCGCACCAGCCAGTTGCCCCAGGTGCCCACGATCGCCGAGAGCGGCCTGCCGGAG TTGAAGGGCTTCGAGGCCGTGGGCTGGCTGGGGCTGATGGCGCCCAGGGGCACGCCCCGGCCCGTGGTGGATCGCCTGAA CCGCGAGGTGGTGGACATCCTGAACAGCCCGGACATGCAGAAGTTCATCCGCGACCGCGGCTCCGAACCCGCGCCGACCA CGCCCGAGGCGATGGACCAGTTCGTCGCCAGCGAGATCGTGGAGTGGGGCAAGGCAGTGAAGCAGTCCGGCGCCGCGGTG GATTGA
Upstream 100 bases:
>100_bases TTCGGTCGCGGCATATCATCGGAAACGCCCCTGCGCGTGCTATCCATCCCGCTGCGCGGCACCGGCCGCGACCCGGGCAT GACAAAAGGAGACATGTTCC
Downstream 100 bases:
>100_bases CGGCGCCTGCTCGGCACGGAGGAACGTCGCTGGCGTGCCTTCTCACGGAGTTTCCGTGCAGGGTGCCTTGGGCATGTGGG CCTGCAGCTGGCGCAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRLKSCAAAALLALSGAASAAWPDKPITLVVPFPPGQATDIFARALAEKLGARLGQPLVVDNKAGAGSNIGTEQVVRSKP DGYTLVMAGSAMAVNQTLYRKVNFDPRKDLQGISLVAKVPLVFLAHPGSGIRSMQNLVARARAEPGKLSYASAGIGGTQH LSAEMVKARARIEIEHIPYKGSGPAQADFLGGQVPLMVDSVTAGLANIQAGKAVPLGVTSATRTSQLPQVPTIAESGLPE LKGFEAVGWLGLMAPRGTPRPVVDRLNREVVDILNSPDMQKFIRDRGSEPAPTTPEAMDQFVASEIVEWGKAVKQSGAAV D
Sequences:
>Translated_321_residues MRLKSCAAAALLALSGAASAAWPDKPITLVVPFPPGQATDIFARALAEKLGARLGQPLVVDNKAGAGSNIGTEQVVRSKP DGYTLVMAGSAMAVNQTLYRKVNFDPRKDLQGISLVAKVPLVFLAHPGSGIRSMQNLVARARAEPGKLSYASAGIGGTQH LSAEMVKARARIEIEHIPYKGSGPAQADFLGGQVPLMVDSVTAGLANIQAGKAVPLGVTSATRTSQLPQVPTIAESGLPE LKGFEAVGWLGLMAPRGTPRPVVDRLNREVVDILNSPDMQKFIRDRGSEPAPTTPEAMDQFVASEIVEWGKAVKQSGAAV D >Mature_321_residues MRLKSCAAAALLALSGAASAAWPDKPITLVVPFPPGQATDIFARALAEKLGARLGQPLVVDNKAGAGSNIGTEQVVRSKP DGYTLVMAGSAMAVNQTLYRKVNFDPRKDLQGISLVAKVPLVFLAHPGSGIRSMQNLVARARAEPGKLSYASAGIGGTQH LSAEMVKARARIEIEHIPYKGSGPAQADFLGGQVPLMVDSVTAGLANIQAGKAVPLGVTSATRTSQLPQVPTIAESGLPE LKGFEAVGWLGLMAPRGTPRPVVDRLNREVVDILNSPDMQKFIRDRGSEPAPTTPEAMDQFVASEIVEWGKAVKQSGAAV D
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33598; Mature: 33598
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKSCAAAALLALSGAASAAWPDKPITLVVPFPPGQATDIFARALAEKLGARLGQPLVV CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE DNKAGAGSNIGTEQVVRSKPDGYTLVMAGSAMAVNQTLYRKVNFDPRKDLQGISLVAKVP ECCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LVFLAHPGSGIRSMQNLVARARAEPGKLSYASAGIGGTQHLSAEMVKARARIEIEHIPYK EEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCC GSGPAQADFLGGQVPLMVDSVTAGLANIQAGKAVPLGVTSATRTSQLPQVPTIAESGLPE CCCCCCHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCC LKGFEAVGWLGLMAPRGTPRPVVDRLNREVVDILNSPDMQKFIRDRGSEPAPTTPEAMDQ CCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHH FVASEIVEWGKAVKQSGAAVD HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRLKSCAAAALLALSGAASAAWPDKPITLVVPFPPGQATDIFARALAEKLGARLGQPLVV CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE DNKAGAGSNIGTEQVVRSKPDGYTLVMAGSAMAVNQTLYRKVNFDPRKDLQGISLVAKVP ECCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LVFLAHPGSGIRSMQNLVARARAEPGKLSYASAGIGGTQHLSAEMVKARARIEIEHIPYK EEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCC GSGPAQADFLGGQVPLMVDSVTAGLANIQAGKAVPLGVTSATRTSQLPQVPTIAESGLPE CCCCCCHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCC LKGFEAVGWLGLMAPRGTPRPVVDRLNREVVDILNSPDMQKFIRDRGSEPAPTTPEAMDQ CCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHH FVASEIVEWGKAVKQSGAAVD HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]