Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is bugT [H]
Identifier: 120611100
GI number: 120611100
Start: 2650462
End: 2651442
Strand: Direct
Name: bugT [H]
Synonym: Aave_2429
Alternate gene names: 120611100
Gene position: 2650462-2651442 (Clockwise)
Preceding gene: 120611099
Following gene: 120611101
Centisome position: 49.52
GC content: 66.36
Gene sequence:
>981_bases ATGAACCGCGCCAAGAGGATGCTGCTGTCCACCATCGCCTGTTGCCTGGGAAGCGCCGCGCTGGCGCCCGCCTTCGCACA GGAGACCTATCCCAGCAGGCCCGTCACCCTTGTGATCCCGTTCCCGCCCGGTGGCGCCACCGACGTGCTGGGCCGTGTCA TCGGCAAGAAGCTGGGCGATGTGCTCGGCCAGAGCGTGGTGATCGACAACCGCGCGGGCGCCGGCACCGTGATCGGGGCA TCCTATGTCGCCAAGGCCGCGCCGGATGGCTACACGCTACTGATGAGTTCCGGCACCACCTTCACCGTCAATCCGGCCGT GCGCGCCAAGCTTCCCTACGATCCCGTGAAGAGCTTCGAGCCGATCGGCATCACCGGCCGCACCGGGCTCATCCTGCTGG CCGGCAAGAGCGTGCCGGCCAATGGCGTCAAGCAGTTCGTGTCCCTGGTCAAGGCCGCACCGGACAAGTATTCCTATGGT TCCTTCGGTTCAGGCACCACCTCGCAGTTCGCCGGAGAGGCCTTCTTCCACCTGGCGGGCCTGAAGATCCAGCATGTTCC GTACAAGGGCAGCGCCCCGGCCATGGTGGACCTCATGGGCGGCCAGATTCCCTTCACGGTCGATACGGTCTCGGCCGCGA TTCCCCAGCTCAAGGAAGGAAAGATCAAGGCCATCGCCGTCACTTCCGCCAGGCGTTCCTCGCTGCTGCCGGACGTGCCC ACGCTGGCCGAGAAAGGCTACGCGATCGACATGGATACCTGGCTGGCGATGGTGGCTCCGGCCGGCCTGCCGCCAGCCGT GAAAGCCCGCCTGGAGCGCGCGCTGGCCCAGGTGATGGAAGACCGCGAAACGCGCGAGAAGCTGCTGGCCAACGGCTTCG AGCCGTCCTATGGTTCGTCCAGGGAGCTGGCTTCGCTCATCGAGAAGGAACTGCCCCTGATGCGCGCCGTGGCCCAGCGC GCCGGCATCACCGTCGACTGA
Upstream 100 bases:
>100_bases TCAGCGTTTCGAGGCCCGCGGCCGGTCTCTGCTGGAGGCCGCCGCCTGACCGGCGCCCGCCATCCATCCGATCTTCCATT CAACCCCCGGAGAGAACACC
Downstream 100 bases:
>100_bases CCACCTGACCGGTTTTTCCGGTATTTTCAAGCCTCCAGGAGACAACGCCGCCTTCCAGGGCGGCGCACCACATGACACAG ACCGCATCTTCCTCCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MNRAKRMLLSTIACCLGSAALAPAFAQETYPSRPVTLVIPFPPGGATDVLGRVIGKKLGDVLGQSVVIDNRAGAGTVIGA SYVAKAAPDGYTLLMSSGTTFTVNPAVRAKLPYDPVKSFEPIGITGRTGLILLAGKSVPANGVKQFVSLVKAAPDKYSYG SFGSGTTSQFAGEAFFHLAGLKIQHVPYKGSAPAMVDLMGGQIPFTVDTVSAAIPQLKEGKIKAIAVTSARRSSLLPDVP TLAEKGYAIDMDTWLAMVAPAGLPPAVKARLERALAQVMEDRETREKLLANGFEPSYGSSRELASLIEKELPLMRAVAQR AGITVD
Sequences:
>Translated_326_residues MNRAKRMLLSTIACCLGSAALAPAFAQETYPSRPVTLVIPFPPGGATDVLGRVIGKKLGDVLGQSVVIDNRAGAGTVIGA SYVAKAAPDGYTLLMSSGTTFTVNPAVRAKLPYDPVKSFEPIGITGRTGLILLAGKSVPANGVKQFVSLVKAAPDKYSYG SFGSGTTSQFAGEAFFHLAGLKIQHVPYKGSAPAMVDLMGGQIPFTVDTVSAAIPQLKEGKIKAIAVTSARRSSLLPDVP TLAEKGYAIDMDTWLAMVAPAGLPPAVKARLERALAQVMEDRETREKLLANGFEPSYGSSRELASLIEKELPLMRAVAQR AGITVD >Mature_326_residues MNRAKRMLLSTIACCLGSAALAPAFAQETYPSRPVTLVIPFPPGGATDVLGRVIGKKLGDVLGQSVVIDNRAGAGTVIGA SYVAKAAPDGYTLLMSSGTTFTVNPAVRAKLPYDPVKSFEPIGITGRTGLILLAGKSVPANGVKQFVSLVKAAPDKYSYG SFGSGTTSQFAGEAFFHLAGLKIQHVPYKGSAPAMVDLMGGQIPFTVDTVSAAIPQLKEGKIKAIAVTSARRSSLLPDVP TLAEKGYAIDMDTWLAMVAPAGLPPAVKARLERALAQVMEDRETREKLLANGFEPSYGSSRELASLIEKELPLMRAVAQR AGITVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34146; Mature: 34146
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAKRMLLSTIACCLGSAALAPAFAQETYPSRPVTLVIPFPPGGATDVLGRVIGKKLGD CCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH VLGQSVVIDNRAGAGTVIGASYVAKAAPDGYTLLMSSGTTFTVNPAVRAKLPYDPVKSFE HHCCEEEEECCCCCCCEEHHHHHHHCCCCCEEEEEECCCEEEECCCEEECCCCCHHHCCC PIGITGRTGLILLAGKSVPANGVKQFVSLVKAAPDKYSYGSFGSGTTSQFAGEAFFHLAG CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC LKIQHVPYKGSAPAMVDLMGGQIPFTVDTVSAAIPQLKEGKIKAIAVTSARRSSLLPDVP EEEEECCCCCCCCCEEECCCCCCCEEHHHHHHHCCCCCCCCEEEEEEECHHHHCCCCCCH TLAEKGYAIDMDTWLAMVAPAGLPPAVKARLERALAQVMEDRETREKLLANGFEPSYGSS HHHHCCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RELASLIEKELPLMRAVAQRAGITVD HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNRAKRMLLSTIACCLGSAALAPAFAQETYPSRPVTLVIPFPPGGATDVLGRVIGKKLGD CCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH VLGQSVVIDNRAGAGTVIGASYVAKAAPDGYTLLMSSGTTFTVNPAVRAKLPYDPVKSFE HHCCEEEEECCCCCCCEEHHHHHHHCCCCCEEEEEECCCEEEECCCEEECCCCCHHHCCC PIGITGRTGLILLAGKSVPANGVKQFVSLVKAAPDKYSYGSFGSGTTSQFAGEAFFHLAG CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC LKIQHVPYKGSAPAMVDLMGGQIPFTVDTVSAAIPQLKEGKIKAIAVTSARRSSLLPDVP EEEEECCCCCCCCCEEECCCCCCCEEHHHHHHHCCCCCCCCEEEEEEECHHHHCCCCCCH TLAEKGYAIDMDTWLAMVAPAGLPPAVKARLERALAQVMEDRETREKLLANGFEPSYGSS HHHHCCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RELASLIEKELPLMRAVAQRAGITVD HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]