Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611032
Identifier: 120611032
GI number: 120611032
Start: 2579153
End: 2579500
Strand: Direct
Name: 120611032
Synonym: Aave_2361
Alternate gene names: NA
Gene position: 2579153-2579500 (Clockwise)
Preceding gene: 120611031
Following gene: 120611033
Centisome position: 48.18
GC content: 68.39
Gene sequence:
>348_bases ATGACCCATCAAGAAACCGAGTTTCACCTGACCATCGGCATCACCGTGCGAGGTGTCGGCGAGCATGAGCCCGTGCAGCC CTACGTGGTCGATGCGGTGCAGGAGCTGGCGCACTCGCGCCTGTTCCTGGCTGGACGAATTGGGCAGGGGGTGGTCTCGG AGCATGACAGCGACCACGGCCGTGTCGTGACCACCACCACGGTGACTCGTGGCCGCCGCCCGTCGAGCGGGACACCCACC GCCGAGGAGATGGCGGCAGCCGGGCCGAGCGCTCCGGATCCTGCCGACTTCGCTCTGGGGAAGGCCTGCGACCTGTCGGG CGAGGGCGGCTGCGAGGCGTGTCAGTAG
Upstream 100 bases:
>100_bases CAAAAGCTGCAGGCCACGCAACTGATGTCCGAACCCTCCGGGACGCCTGGCCGGTGATCCCGCCGGGCCGGCCGGATGCC GGCACCCAGGGAAGCACACC
Downstream 100 bases:
>100_bases CGCGGCCTGGGCTGAAGACAGCTCGCGAGCGGCGGTTGCCGCCGTACCAAGCCTGCCATCTTCACGCGTGCCAACAACTA CAGCAGCACATCGCATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTHQETEFHLTIGITVRGVGEHEPVQPYVVDAVQELAHSRLFLAGRIGQGVVSEHDSDHGRVVTTTTVTRGRRPSSGTPT AEEMAAAGPSAPDPADFALGKACDLSGEGGCEACQ
Sequences:
>Translated_115_residues MTHQETEFHLTIGITVRGVGEHEPVQPYVVDAVQELAHSRLFLAGRIGQGVVSEHDSDHGRVVTTTTVTRGRRPSSGTPT AEEMAAAGPSAPDPADFALGKACDLSGEGGCEACQ >Mature_114_residues THQETEFHLTIGITVRGVGEHEPVQPYVVDAVQELAHSRLFLAGRIGQGVVSEHDSDHGRVVTTTTVTRGRRPSSGTPTA EEMAAAGPSAPDPADFALGKACDLSGEGGCEACQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12023; Mature: 11892
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHQETEFHLTIGITVRGVGEHEPVQPYVVDAVQELAHSRLFLAGRIGQGVVSEHDSDHG CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC RVVTTTTVTRGRRPSSGTPTAEEMAAAGPSAPDPADFALGKACDLSGEGGCEACQ EEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure THQETEFHLTIGITVRGVGEHEPVQPYVVDAVQELAHSRLFLAGRIGQGVVSEHDSDHG CCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC RVVTTTTVTRGRRPSSGTPTAEEMAAAGPSAPDPADFALGKACDLSGEGGCEACQ EEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA