Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611033
Identifier: 120611033
GI number: 120611033
Start: 2579595
End: 2580242
Strand: Direct
Name: 120611033
Synonym: Aave_2362
Alternate gene names: NA
Gene position: 2579595-2580242 (Clockwise)
Preceding gene: 120611032
Following gene: 120611034
Centisome position: 48.19
GC content: 64.51
Gene sequence:
>648_bases ATGACCAATCCCATCATCCAGCCTACCGTCGGTAGGGTCGTCTGGTTTCATCTCTCGAAGCATCGCGGGCCGACGAGCTT CACCCGTCAGCCCGGCGAGCAGCCTTGCGCCGCGATCATCACGAGCGTCCTGGACGACGGCCGCGTGAATCTGTCGGTGT TCGACTCCGACGGTGCGGTCCACAGCTTTCGCTGTGTCGAATTGGTGCAGGAGGGGCAACCGGTTCCGTCCTACCCCTAC TGCGAGTGGATGCCCTACCAGAAGGGGCAGGCGACGAAGGCCGAAGCGGCGAAGAAGTCGCCTATCCACGTCGATGCAAA TTCGGCGCTGGTCTATGCGTTGATCGGTGTGGGGGCCAAGCTGTCGGGCGCTCCGTCCATCAATCTGCCGGTACTTGACC CCGGCGCCGACTGGATCGAGCGCGAGATCCAGCGCAAGTCCGCCGCCGCACATGCCCAGTTCGCCAACGGCCTGACCCAG GGCGATGGAACCACTGCCGACAGGCTCCATGCGCTGCGCCTTTCTGAAGACGCGCGCTCTGCGAGCGGCAAGGCTGCCGA GGTGCCGGTATCGCTGCTGCTGCACATCTTCTGCCTGCTTGTGGCTCGCCTGCCTCTGGCCGGCTGTGGTGCACCTCCCA AAGCCTGA
Upstream 100 bases:
>100_bases CAGTAGCGCGGCCTGGGCTGAAGACAGCTCGCGAGCGGCGGTTGCCGCCGTACCAAGCCTGCCATCTTCACGCGTGCCAA CAACTACAGCAGCACATCGC
Downstream 100 bases:
>100_bases CCCACACAACTTCGAATCTGGAGCCAAACATGACCATGGACAAGGACGACGATCGCCTGCGCCTGCTCTCCGACGCCGAG CGCGCGGCGATGGAAGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTNPIIQPTVGRVVWFHLSKHRGPTSFTRQPGEQPCAAIITSVLDDGRVNLSVFDSDGAVHSFRCVELVQEGQPVPSYPY CEWMPYQKGQATKAEAAKKSPIHVDANSALVYALIGVGAKLSGAPSINLPVLDPGADWIEREIQRKSAAAHAQFANGLTQ GDGTTADRLHALRLSEDARSASGKAAEVPVSLLLHIFCLLVARLPLAGCGAPPKA
Sequences:
>Translated_215_residues MTNPIIQPTVGRVVWFHLSKHRGPTSFTRQPGEQPCAAIITSVLDDGRVNLSVFDSDGAVHSFRCVELVQEGQPVPSYPY CEWMPYQKGQATKAEAAKKSPIHVDANSALVYALIGVGAKLSGAPSINLPVLDPGADWIEREIQRKSAAAHAQFANGLTQ GDGTTADRLHALRLSEDARSASGKAAEVPVSLLLHIFCLLVARLPLAGCGAPPKA >Mature_214_residues TNPIIQPTVGRVVWFHLSKHRGPTSFTRQPGEQPCAAIITSVLDDGRVNLSVFDSDGAVHSFRCVELVQEGQPVPSYPYC EWMPYQKGQATKAEAAKKSPIHVDANSALVYALIGVGAKLSGAPSINLPVLDPGADWIEREIQRKSAAAHAQFANGLTQG DGTTADRLHALRLSEDARSASGKAAEVPVSLLLHIFCLLVARLPLAGCGAPPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22881; Mature: 22750
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPIIQPTVGRVVWFHLSKHRGPTSFTRQPGEQPCAAIITSVLDDGRVNLSVFDSDGAV CCCCCCCCCHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC HSFRCVELVQEGQPVPSYPYCEWMPYQKGQATKAEAAKKSPIHVDANSALVYALIGVGAK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHCCCC LSGAPSINLPVLDPGADWIEREIQRKSAAAHAQFANGLTQGDGTTADRLHALRLSEDARS CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH ASGKAAEVPVSLLLHIFCLLVARLPLAGCGAPPKA CCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNPIIQPTVGRVVWFHLSKHRGPTSFTRQPGEQPCAAIITSVLDDGRVNLSVFDSDGAV CCCCCCCCHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC HSFRCVELVQEGQPVPSYPYCEWMPYQKGQATKAEAAKKSPIHVDANSALVYALIGVGAK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHCCCC LSGAPSINLPVLDPGADWIEREIQRKSAAAHAQFANGLTQGDGTTADRLHALRLSEDARS CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH ASGKAAEVPVSLLLHIFCLLVARLPLAGCGAPPKA CCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA