Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611031
Identifier: 120611031
GI number: 120611031
Start: 2578644
End: 2579156
Strand: Direct
Name: 120611031
Synonym: Aave_2360
Alternate gene names: NA
Gene position: 2578644-2579156 (Clockwise)
Preceding gene: 120611030
Following gene: 120611032
Centisome position: 48.17
GC content: 69.2
Gene sequence:
>513_bases GTGATTCCCTCGCTCTACACCCACCTCGCTGCTGCCGGCGCGGCGGCCGCGCTCGCCTGGGCATTCCAAGGCGCGCGGAT GGATGCGGAGGTGGGCGAAGCCAACCTGCGGGCCACCACCTTTCAACTCGACGTGAGCACCGCGCAGCGCGCCGCTGACG CCCGAGTCCGCGTCGCCGAGAACGCGACCAGCACCAAGTACCAAGGAGCCCTCAATGCCGCCCGAACCCGTGAGGCGCTG CTGCGCCAGGAGCTTGACCTGCTGCGTGTTGCTTCTGACGGCCTGCGCGACCAAGCCGCAGATGCCGCCCGGCGACTTGC CGCATCTCCCCCCAGCACCAGCCGTGACTACGCCCTTGCCGTCAACGCCGTATACGACGACTGCCGCGCAGCGTATGGCG ACATGGCAGCAAAAGCTGCAGGCCACGCAACTGATGTCCGAACCCTCCGGGACGCCTGGCCGGTGATCCCGCCGGGCCGG CCGGATGCCGGCACCCAGGGAAGCACACCATGA
Upstream 100 bases:
>100_bases CGCCGCTGCCTGAGCTGCGCGCAGGAGCGTCCAGCCTCGAGCGCCGGCTGCACACGCAGGCGATCGTTCGCATGTACGCC GCGTGCGCTGGGAGTCAGCC
Downstream 100 bases:
>100_bases CCCATCAAGAAACCGAGTTTCACCTGACCATCGGCATCACCGTGCGAGGTGTCGGCGAGCATGAGCCCGTGCAGCCCTAC GTGGTCGATGCGGTGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIPSLYTHLAAAGAAAALAWAFQGARMDAEVGEANLRATTFQLDVSTAQRAADARVRVAENATSTKYQGALNAARTREAL LRQELDLLRVASDGLRDQAADAARRLAASPPSTSRDYALAVNAVYDDCRAAYGDMAAKAAGHATDVRTLRDAWPVIPPGR PDAGTQGSTP
Sequences:
>Translated_170_residues MIPSLYTHLAAAGAAAALAWAFQGARMDAEVGEANLRATTFQLDVSTAQRAADARVRVAENATSTKYQGALNAARTREAL LRQELDLLRVASDGLRDQAADAARRLAASPPSTSRDYALAVNAVYDDCRAAYGDMAAKAAGHATDVRTLRDAWPVIPPGR PDAGTQGSTP >Mature_170_residues MIPSLYTHLAAAGAAAALAWAFQGARMDAEVGEANLRATTFQLDVSTAQRAADARVRVAENATSTKYQGALNAARTREAL LRQELDLLRVASDGLRDQAADAARRLAASPPSTSRDYALAVNAVYDDCRAAYGDMAAKAAGHATDVRTLRDAWPVIPPGR PDAGTQGSTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17852; Mature: 17852
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSLYTHLAAAGAAAALAWAFQGARMDAEVGEANLRATTFQLDVSTAQRAADARVRVAE CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEEEEHHHHHHHHHHHEEECC NATSTKYQGALNAARTREALLRQELDLLRVASDGLRDQAADAARRLAASPPSTSRDYALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEE VNAVYDDCRAAYGDMAAKAAGHATDVRTLRDAWPVIPPGRPDAGTQGSTP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPSLYTHLAAAGAAAALAWAFQGARMDAEVGEANLRATTFQLDVSTAQRAADARVRVAE CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEEEEHHHHHHHHHHHEEECC NATSTKYQGALNAARTREALLRQELDLLRVASDGLRDQAADAARRLAASPPSTSRDYALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEE VNAVYDDCRAAYGDMAAKAAGHATDVRTLRDAWPVIPPGRPDAGTQGSTP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA