Click here to switch to the map view.

The map label for this gene is bkdR [H]

Identifier: 120610982

GI number: 120610982

Start: 2535526

End: 2535999

Strand: Reverse

Name: bkdR [H]

Synonym: Aave_2309

Alternate gene names: 120610982

Gene position: 2535999-2535526 (Counterclockwise)

Preceding gene: 120610983

Following gene: 120610973

Centisome position: 47.38

GC content: 66.24

Gene sequence:

>474_bases
ATGAAGCTGGACACGATCGATCTGCGCATCCTGGCCGAACTGCAGGCCGACGGCTCGCTCTCCAATGTGGAGCTGGCGCG
GCGCGTGCATCTTTCGCCCTCGCCCTGCCTCGCGCGCGTCAAGGCGCTGGAGGCCTCGGGGGTGATTGCGCGCTACGTCG
CCCTGGCGAACCCGGCCGTGCTGGGCCTGGGGCTGAACGTGTTCATCAGCATCAGCCTGAAATCGCAGGCCAAGGAGGCA
CTGGCGCAGTTCGAGCGTCGCATCGCCGAGCATGACGAGGTCATGGAGTGCTACCTGATGAGCGGCGACTCGGACTACCT
GATCCGCGTGGCCGTCGCCGACATCGGCGCTCTGGAGCGCTTCATCCTGGAGCAGCTCACGCCCATTCCGGGCATCGAGA
AGATCCGCTCCAGCTTCGCGCTCAAGCAGGTGCGTTACAAGACCGCCCTGCCGCTTCCACTGCCGCCCGCGTGA

Upstream 100 bases:

>100_bases
AGCACTCTACCGGCCCCGGCGCGGCATGGGCGGCTGTTCGGCATCCTGGCAAACCCCGAATGACAGCATTTCATGCCGGC
GATCTTCTAAACTGCGGCAC

Downstream 100 bases:

>100_bases
CTGCGCAGGGCCGCGGCCACCGCGGCCTCACCACGCGGCGTCGAACAGCTCCAGTTGCGGAGGGCCCAGGTACAAGTCGC
GCTTCTGGTCGGCGTTCGCA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKLDTIDLRILAELQADGSLSNVELARRVHLSPSPCLARVKALEASGVIARYVALANPAVLGLGLNVFISISLKSQAKEA
LAQFERRIAEHDEVMECYLMSGDSDYLIRVAVADIGALERFILEQLTPIPGIEKIRSSFALKQVRYKTALPLPLPPA

Sequences:

>Translated_157_residues
MKLDTIDLRILAELQADGSLSNVELARRVHLSPSPCLARVKALEASGVIARYVALANPAVLGLGLNVFISISLKSQAKEA
LAQFERRIAEHDEVMECYLMSGDSDYLIRVAVADIGALERFILEQLTPIPGIEKIRSSFALKQVRYKTALPLPLPPA
>Mature_157_residues
MKLDTIDLRILAELQADGSLSNVELARRVHLSPSPCLARVKALEASGVIARYVALANPAVLGLGLNVFISISLKSQAKEA
LAQFERRIAEHDEVMECYLMSGDSDYLIRVAVADIGALERFILEQLTPIPGIEKIRSSFALKQVRYKTALPLPLPPA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=43.2432432432432, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=39.3333333333333, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17165; Mature: 17165

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDTIDLRILAELQADGSLSNVELARRVHLSPSPCLARVKALEASGVIARYVALANPAV
CCCCHHHHHHEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHH
LGLGLNVFISISLKSQAKEALAQFERRIAEHDEVMECYLMSGDSDYLIRVAVADIGALER
EEECEEEEEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHH
FILEQLTPIPGIEKIRSSFALKQVRYKTALPLPLPPA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLDTIDLRILAELQADGSLSNVELARRVHLSPSPCLARVKALEASGVIARYVALANPAV
CCCCHHHHHHEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHH
LGLGLNVFISISLKSQAKEALAQFERRIAEHDEVMECYLMSGDSDYLIRVAVADIGALER
EEECEEEEEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHH
FILEQLTPIPGIEKIRSSFALKQVRYKTALPLPLPPA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]