Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ybeQ [C]
Identifier: 120610960
GI number: 120610960
Start: 2517919
End: 2518500
Strand: Reverse
Name: ybeQ [C]
Synonym: Aave_2286
Alternate gene names: 120610960
Gene position: 2518500-2517919 (Counterclockwise)
Preceding gene: 120610961
Following gene: 120610959
Centisome position: 47.05
GC content: 76.63
Gene sequence:
>582_bases ATGGCACCAGGCCCCTCCTCGCCCGCTGACCATCGCCGCACGCCCGCGGAGCGCACCGAGGCGGTGCGCTGGCTGGCGCA GGCGGCGGACGGCGGCTCCGCGCTCGCGGCGGTGCGGCTGGGAGCGATGTACGAGCGCGGCGGGGACGGCGAGCCGCGCC AGCTGTCGGCCGCGGAGAACTGGTACCTGCGCGCGGCGCGCCAGGGCGATGCCGCCGGGCTCTACAGCCTGGGCGCGCTG TATGCGCGGGGCAGCGACACCGTGGTGCAGCGGCCCATCACCGCCTGCATGCTGATGGAACTCGCGGCCCGCGCCCATGC GGGATCGGGCCGGGACGACGTGCTGCTGCCGGCGGGTCACAGTGCCCTGGCCGCGCGGGCCGCCCAGACGCGGCTGGCAG GCGCCCTGGCCGCGCAGGACGCGGCGGAAGCGCAGCGGCGCGCCGACGCGTGGAAACCGGGCCAGCCGCTGGATCTCTGG CCCCGCGGGCCGGCAGGTCAGCGGGAGCGCATCACCGCCTGCGCCACCAGAGGAACAGCGCCAGGAACGTCAGGCCGAAG AACAGCGGGATCCAGGCCATGA
Upstream 100 bases:
>100_bases CGCGCAGGCGGCTGCGCAGGAGAGACAATCGCGGCCATTCCACCGCGCACGGCCGCTGCAGGCAGCACCGCCGCGGCAAC GCCACCCGCACAGGACGCAT
Downstream 100 bases:
>100_bases AGGTTTCCAGCAGCGACGAGGGCCGCATGCCGGACCAGACCCCGATGCGCACCCGGTCGATGCGCAGGTCGCGGGCGGCA GCGAATTCCGCCACGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAPGPSSPADHRRTPAERTEAVRWLAQAADGGSALAAVRLGAMYERGGDGEPRQLSAAENWYLRAARQGDAAGLYSLGAL YARGSDTVVQRPITACMLMELAARAHAGSGRDDVLLPAGHSALAARAAQTRLAGALAAQDAAEAQRRADAWKPGQPLDLW PRGPAGQRERITACATRGTAPGTSGRRTAGSRP
Sequences:
>Translated_193_residues MAPGPSSPADHRRTPAERTEAVRWLAQAADGGSALAAVRLGAMYERGGDGEPRQLSAAENWYLRAARQGDAAGLYSLGAL YARGSDTVVQRPITACMLMELAARAHAGSGRDDVLLPAGHSALAARAAQTRLAGALAAQDAAEAQRRADAWKPGQPLDLW PRGPAGQRERITACATRGTAPGTSGRRTAGSRP >Mature_192_residues APGPSSPADHRRTPAERTEAVRWLAQAADGGSALAAVRLGAMYERGGDGEPRQLSAAENWYLRAARQGDAAGLYSLGALY ARGSDTVVQRPITACMLMELAARAHAGSGRDDVLLPAGHSALAARAAQTRLAGALAAQDAAEAQRRADAWKPGQPLDLWP RGPAGQRERITACATRGTAPGTSGRRTAGSRP
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20059; Mature: 19927
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGPSSPADHRRTPAERTEAVRWLAQAADGGSALAAVRLGAMYERGGDGEPRQLSAAEN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHH WYLRAARQGDAAGLYSLGALYARGSDTVVQRPITACMLMELAARAHAGSGRDDVLLPAGH HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC SALAARAAQTRLAGALAAQDAAEAQRRADAWKPGQPLDLWPRGPAGQRERITACATRGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC PGTSGRRTAGSRP CCCCCCCCCCCCC >Mature Secondary Structure APGPSSPADHRRTPAERTEAVRWLAQAADGGSALAAVRLGAMYERGGDGEPRQLSAAEN CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHH WYLRAARQGDAAGLYSLGALYARGSDTVVQRPITACMLMELAARAHAGSGRDDVLLPAGH HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC SALAARAAQTRLAGALAAQDAAEAQRRADAWKPGQPLDLWPRGPAGQRERITACATRGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC PGTSGRRTAGSRP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA