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The map label for this gene is ybdA [C]

Identifier: 120610959

GI number: 120610959

Start: 2516317

End: 2517684

Strand: Reverse

Name: ybdA [C]

Synonym: Aave_2285

Alternate gene names: 120610959

Gene position: 2517684-2516317 (Counterclockwise)

Preceding gene: 120610960

Following gene: 120610958

Centisome position: 47.04

GC content: 71.93

Gene sequence:

>1368_bases
ATGGCGGCGCCGGCGGCGGATTCCGGTCGGCGGGGCACGCGAAGCGGTAGCATGCGGGCCGTGCCTGTTCCTCCGTCCCC
CCAGCCCTCCCCCGCCCCGTCCGTCCCGGCGCCCCGCTCCTCCAGCATCTACCAGCATCCCGGCTTTCTCGCGTTCATCG
TGGCGCGGGTGGCCGCCATGTTCGCCACGCAGGTGCAGGCGGTGGTGGTGGCCTGGCAGGTGTACGACCTGACCCGCGAA
CCCCTGGCGCTGGCCTGTGTGGGGCTGGCGCAGTTCCTGCCCATGCTGGCGCTGCTGCTGCCCGCAGGCGACCTGATCGA
CCGCGTGCAGCGCAAGCGCATTCTTTGCGCGAGCTGGGCCGTGGGCGCCGTGTGCAGCGCGGCGCTGTGGTGGCTCGCCG
GGCACGGCGCCGCGGGGGTGACGGGCATCTATGCGGTGCTGGTGCTGTTCGGCGCCTCGCGCGCGTTCTCGGCCCCTGCG
CTGCAGAGCCTGCTGCCGCAGGTGGTGCCGCGGGAGCGGCTGGCCTCGGCCATCGCAGCCAATTCCATGCTGATGCGCAC
GGCGGCCATCGCCGGTCCGTTCCTGGGTGGCCTGCTGTACGCGGCCGGGGGTGGCGAGCTGACGTATGCCGTGTGCCTGG
TGGCGTTCGCCGTGGGGGCCGCGCTGATGCTGCGGGTGCCGGTGGCGCACGCGACCCCGCTGGGACCGGTGCTGGGCACG
ATGCGCGAGCGCTTCGGCGAGGGCATCCGCTTCATCCGGTCGCGGCCCATCATCCTGGGGACAATTTCGCTGGACCTGTT
CGCCGTGCTGCTGGGCGGCGTGATCGCGCTGCTGCCCATCTACGCGCACGAGGTGCTGCACGTGGGGCCGGAAGGCCTGG
GCGCGCTGCGCAGCGCCATGGCCATGGGCGAGGTGGGCATGGGCTTCTACCTGAGCCTGCGGCCGTTCAACCGCCGGGTG
GGCGCGACGATGTTCATCGCGGTCGCCGTGTTCGGCGTGGCCAACCTGGTGTTCGCGTTCTCGACCGTGTTCTGGCTGTC
GTTCGCGGCGCTGGTGGTCGCGGGCGCGGCGGACATGGTGAGCGTGTACATCCGCGGTTCGCTGGTGCAATTCTCCACGC
CCGACGCCATGCGCGGCCGGGTGAGCGCGGTCAACATGCTGTTCATCGGCTCATCCAATGAACTCGGCGAATTCCGCGCC
GGCACCAGCGCTGCCTGGCTGGGCACCGTGCCCGCGGCCGTGGTGGGCGGCCTGTGCACGCTCGGAGTGGTGGGGGCTTG
GGCCTGGATGTTCAAGCCGTTGCGGCGGGTGGACCGGTTCGAAGAAGCATCGCCCCGGCCGGGCGCGGAGCCACCGCGTC
CCCATTGA

Upstream 100 bases:

>100_bases
GCGGCGCCGGCCATTTCCACCGGCTGGCCGGCGCGCAGGCCCTTGGCCACGATCTCCGGAACGACGTTCAGGCGTGCGCC
GTGCCGGTTCCGGGGCGGGC

Downstream 100 bases:

>100_bases
TTCTCGATCCCTCCTTGGTGAATGTAGTATTTTTACCAATTCACCGATGTGATCTTTTGTGTAGTTCGGGCTTCTCCGGA
AATGCGGGACCATCGTTTTC

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; DrugProton Antiporter; MFS Permease; Facilitator Superfamily Transporter; Membrane Transporter; Transporter Facilitator Family; Transmembrane Protein; Facilitator Superfamily Transporter Permease; Permease Of Facilitator Superfamily; MFS Family Transporter; Facilitator Superfamily; Integral Membrane Protein; Facilitator MFS1 Protein; Permease Protein; Permease Facilitator Superfamily; Integral Membrane Protein MFS Transporter; Permease MDR ; Macrolide-Efflux Protein; Facilitator Superfamily Transmembrane Transporter; Membrame Protein; Arabinose Efflux Permease; DrugH+ Antiporter; Facilitator Family Transporter; Facilitator Superfamily Multidrug Resistance Protein; Drug Proton Antiporter; Integral Membrane Transporter; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MAAPAADSGRRGTRSGSMRAVPVPPSPQPSPAPSVPAPRSSSIYQHPGFLAFIVARVAAMFATQVQAVVVAWQVYDLTRE
PLALACVGLAQFLPMLALLLPAGDLIDRVQRKRILCASWAVGAVCSAALWWLAGHGAAGVTGIYAVLVLFGASRAFSAPA
LQSLLPQVVPRERLASAIAANSMLMRTAAIAGPFLGGLLYAAGGGELTYAVCLVAFAVGAALMLRVPVAHATPLGPVLGT
MRERFGEGIRFIRSRPIILGTISLDLFAVLLGGVIALLPIYAHEVLHVGPEGLGALRSAMAMGEVGMGFYLSLRPFNRRV
GATMFIAVAVFGVANLVFAFSTVFWLSFAALVVAGAADMVSVYIRGSLVQFSTPDAMRGRVSAVNMLFIGSSNELGEFRA
GTSAAWLGTVPAAVVGGLCTLGVVGAWAWMFKPLRRVDRFEEASPRPGAEPPRPH

Sequences:

>Translated_455_residues
MAAPAADSGRRGTRSGSMRAVPVPPSPQPSPAPSVPAPRSSSIYQHPGFLAFIVARVAAMFATQVQAVVVAWQVYDLTRE
PLALACVGLAQFLPMLALLLPAGDLIDRVQRKRILCASWAVGAVCSAALWWLAGHGAAGVTGIYAVLVLFGASRAFSAPA
LQSLLPQVVPRERLASAIAANSMLMRTAAIAGPFLGGLLYAAGGGELTYAVCLVAFAVGAALMLRVPVAHATPLGPVLGT
MRERFGEGIRFIRSRPIILGTISLDLFAVLLGGVIALLPIYAHEVLHVGPEGLGALRSAMAMGEVGMGFYLSLRPFNRRV
GATMFIAVAVFGVANLVFAFSTVFWLSFAALVVAGAADMVSVYIRGSLVQFSTPDAMRGRVSAVNMLFIGSSNELGEFRA
GTSAAWLGTVPAAVVGGLCTLGVVGAWAWMFKPLRRVDRFEEASPRPGAEPPRPH
>Mature_454_residues
AAPAADSGRRGTRSGSMRAVPVPPSPQPSPAPSVPAPRSSSIYQHPGFLAFIVARVAAMFATQVQAVVVAWQVYDLTREP
LALACVGLAQFLPMLALLLPAGDLIDRVQRKRILCASWAVGAVCSAALWWLAGHGAAGVTGIYAVLVLFGASRAFSAPAL
QSLLPQVVPRERLASAIAANSMLMRTAAIAGPFLGGLLYAAGGGELTYAVCLVAFAVGAALMLRVPVAHATPLGPVLGTM
RERFGEGIRFIRSRPIILGTISLDLFAVLLGGVIALLPIYAHEVLHVGPEGLGALRSAMAMGEVGMGFYLSLRPFNRRVG
ATMFIAVAVFGVANLVFAFSTVFWLSFAALVVAGAADMVSVYIRGSLVQFSTPDAMRGRVSAVNMLFIGSSNELGEFRAG
TSAAWLGTVPAAVVGGLCTLGVVGAWAWMFKPLRRVDRFEEASPRPGAEPPRPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47600; Mature: 47468

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPAADSGRRGTRSGSMRAVPVPPSPQPSPAPSVPAPRSSSIYQHPGFLAFIVARVAAM
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FATQVQAVVVAWQVYDLTREPLALACVGLAQFLPMLALLLPAGDLIDRVQRKRILCASWA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VGAVCSAALWWLAGHGAAGVTGIYAVLVLFGASRAFSAPALQSLLPQVVPRERLASAIAA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
NSMLMRTAAIAGPFLGGLLYAAGGGELTYAVCLVAFAVGAALMLRVPVAHATPLGPVLGT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHH
MRERFGEGIRFIRSRPIILGTISLDLFAVLLGGVIALLPIYAHEVLHVGPEGLGALRSAM
HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AMGEVGMGFYLSLRPFNRRVGATMFIAVAVFGVANLVFAFSTVFWLSFAALVVAGAADMV
HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYIRGSLVQFSTPDAMRGRVSAVNMLFIGSSNELGEFRAGTSAAWLGTVPAAVVGGLCT
HHHHHCCEEEECCCHHHHCHHHEEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
LGVVGAWAWMFKPLRRVDRFEEASPRPGAEPPRPH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AAPAADSGRRGTRSGSMRAVPVPPSPQPSPAPSVPAPRSSSIYQHPGFLAFIVARVAAM
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA