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The map label for this gene is tse [H]

Identifier: 120610958

GI number: 120610958

Start: 2514545

End: 2516188

Strand: Reverse

Name: tse [H]

Synonym: Aave_2284

Alternate gene names: 120610958

Gene position: 2516188-2514545 (Counterclockwise)

Preceding gene: 120610959

Following gene: 120610957

Centisome position: 47.01

GC content: 71.29

Gene sequence:

>1644_bases
ATGAACAAAAATGCAAAAGTGCGCACCCAGCTGATGGTGGCTTTCGGCACGATGGGGGTGCTGATCCTTTTCATGTCGCT
GTTCGGCCTCGCGGCGCTGGGCGACGCGACCACGCGCTTCCAGGGTTACGTGCATGGCATCGGAGCGCGGACCGCCATGA
CGGCCCAGCTGCGCACCGCGATCGATGAGCGCGCCATCGCCGCGCGCAACATCGTGCTGGCGACCACGCCGGCCGAGGTG
CAGACGGAGAAGTCGCGCGGCGAGCAGGCCCACGCCCAGGTCCAGAAATCAATGGCGGAGCTCAAGCAGCTGATGGCGCA
GGCCACGGACACCTCCGACAAGGCACGCGCGCTGGTGGCGCAGATGGACCGGATCGAGCAGAGCTATGCGCCCGTCGCCC
TCGGGATCATCGACCTCGCGGCGCGCGGGGAACGCGACGCCGCCATCACGAAGCTGAACCGGGAATGCCGCCCGCTGCTC
GACCAGTTCGCGGCCGTCACCTCCGAGTACGCACAGCTGTCCCGAAGCCGGGCCCACGAGCTGGCCGACGACGCCGAGGA
CCGGCTCGGGGCGGAGCGGACCGCGCTGATCGCCGCCGCCGTGCTGGCGTTCATCATCGCCACCGTGGCTGGCCTCGTCA
TCACGCGCCGGCTCACGGGCGCGCTCGGGGGCGAGCCCGCGGAGCTGCGGCAGATCGCCGAGCAGGTGGCCAGCGGTGAC
CTCTCCCCCATGCAGCGCCAGGGCGCGGTCGTGCCCGGCAGCGTGCTCGCCTCGCTGGCGAGCATGCATTCGACGCTGGC
CCACATCGTGACGGACGTGCGGCTCGCCTCGGATTCGATCTCCACGGGATCCAGCGAGATCGCCACCGGCAACGCGGACC
TGAGCCGGCGCACGGAGCTGCAGGCCAGCGCCCTGCAGGAGACGGCATCGGCCATGGAAGAACTGAGCGCGACGGTGCGC
CACAACGCCGACAACGCCCGTACCGCGAGCCAGCTGGCGACCGGCGCCACCGACGTGGCCAACCGCGGCGGCCAGATCGT
CGAGCAGGTGGTGGACACCATGCAGGAGATCAGCGCCAGCTCACGCCAGATCACGGACATCACCGGTGTGATCGACAGCA
TCGCGTTCCAGACCAACATCCTGGCGCTGAACGCGGCCGTGGAGGCCGCGCGCGCGGGCGAGCAGGGGCGCGGCTTCGCC
GTGGTGGCCGCCGAGGTCCGCACGCTGGCGCAGCGCAGCGCGCAGGCGGCCAAGGAGATCCGGGCGCTGATCCTGGGCAG
CGTGGAGAAGGTGGACAGGGGCGCCGCCCTGGTCTCCCAGGCGGGGACCACCATGGCCGAGATCGTGGCGGAGATCCGCC
GCGTGAGCGAAATCGTGGGCGAGATCAGCGTGGCGAGCGCCGAGCAGAGCGACGGCGTGCTGCAGGTGGGCCAGGCCGTG
GCTCAGATGGACCAGGCCACGCAGCAGAATGCCGCGCTGGTGGAGGAAGGCGCGGCGGCGGCGGCCAGCCTGCGCGACCA
GGCCCGGCGGCTGGACCAATCGGTGTCGGTCTTCCGGGTGCCAGGGATCGCCGGCGGCGCGGCGGCAACGGGTGCCGGCA
TCGGCTCCGAAACACAGCCCGGGCACCGGCTGGCGCTGCGCTGA

Upstream 100 bases:

>100_bases
ATTTTTACCAATTCACCGATGTGATCTTTTGTGTAGTTCGGGCTTCTCCGGAAATGCGGGACCATCGTTTTCTGATGGAA
TCATTTTTCGGGAGAACCGT

Downstream 100 bases:

>100_bases
ACCGGCCCGCGGCCGCGGGCGCCGCGGAAGGGGACGAGGTGGACTGCGCACTAGAATCCGCGCCACCTCCTCCGTTCCAC
CTCCACGACACGCGTTCTCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MNKNAKVRTQLMVAFGTMGVLILFMSLFGLAALGDATTRFQGYVHGIGARTAMTAQLRTAIDERAIAARNIVLATTPAEV
QTEKSRGEQAHAQVQKSMAELKQLMAQATDTSDKARALVAQMDRIEQSYAPVALGIIDLAARGERDAAITKLNRECRPLL
DQFAAVTSEYAQLSRSRAHELADDAEDRLGAERTALIAAAVLAFIIATVAGLVITRRLTGALGGEPAELRQIAEQVASGD
LSPMQRQGAVVPGSVLASLASMHSTLAHIVTDVRLASDSISTGSSEIATGNADLSRRTELQASALQETASAMEELSATVR
HNADNARTASQLATGATDVANRGGQIVEQVVDTMQEISASSRQITDITGVIDSIAFQTNILALNAAVEAARAGEQGRGFA
VVAAEVRTLAQRSAQAAKEIRALILGSVEKVDRGAALVSQAGTTMAEIVAEIRRVSEIVGEISVASAEQSDGVLQVGQAV
AQMDQATQQNAALVEEGAAAAASLRDQARRLDQSVSVFRVPGIAGGAAATGAGIGSETQPGHRLALR

Sequences:

>Translated_547_residues
MNKNAKVRTQLMVAFGTMGVLILFMSLFGLAALGDATTRFQGYVHGIGARTAMTAQLRTAIDERAIAARNIVLATTPAEV
QTEKSRGEQAHAQVQKSMAELKQLMAQATDTSDKARALVAQMDRIEQSYAPVALGIIDLAARGERDAAITKLNRECRPLL
DQFAAVTSEYAQLSRSRAHELADDAEDRLGAERTALIAAAVLAFIIATVAGLVITRRLTGALGGEPAELRQIAEQVASGD
LSPMQRQGAVVPGSVLASLASMHSTLAHIVTDVRLASDSISTGSSEIATGNADLSRRTELQASALQETASAMEELSATVR
HNADNARTASQLATGATDVANRGGQIVEQVVDTMQEISASSRQITDITGVIDSIAFQTNILALNAAVEAARAGEQGRGFA
VVAAEVRTLAQRSAQAAKEIRALILGSVEKVDRGAALVSQAGTTMAEIVAEIRRVSEIVGEISVASAEQSDGVLQVGQAV
AQMDQATQQNAALVEEGAAAAASLRDQARRLDQSVSVFRVPGIAGGAAATGAGIGSETQPGHRLALR
>Mature_547_residues
MNKNAKVRTQLMVAFGTMGVLILFMSLFGLAALGDATTRFQGYVHGIGARTAMTAQLRTAIDERAIAARNIVLATTPAEV
QTEKSRGEQAHAQVQKSMAELKQLMAQATDTSDKARALVAQMDRIEQSYAPVALGIIDLAARGERDAAITKLNRECRPLL
DQFAAVTSEYAQLSRSRAHELADDAEDRLGAERTALIAAAVLAFIIATVAGLVITRRLTGALGGEPAELRQIAEQVASGD
LSPMQRQGAVVPGSVLASLASMHSTLAHIVTDVRLASDSISTGSSEIATGNADLSRRTELQASALQETASAMEELSATVR
HNADNARTASQLATGATDVANRGGQIVEQVVDTMQEISASSRQITDITGVIDSIAFQTNILALNAAVEAARAGEQGRGFA
VVAAEVRTLAQRSAQAAKEIRALILGSVEKVDRGAALVSQAGTTMAEIVAEIRRVSEIVGEISVASAEQSDGVLQVGQAV
AQMDQATQQNAALVEEGAAAAASLRDQARRLDQSVSVFRVPGIAGGAAATGAGIGSETQPGHRLALR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=460, Percent_Identity=43.9130434782609, Blast_Score=305, Evalue=4e-84,
Organism=Escherichia coli, GI2367378, Length=287, Percent_Identity=61.6724738675958, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1788195, Length=432, Percent_Identity=47.6851851851852, Blast_Score=291, Evalue=8e-80,
Organism=Escherichia coli, GI1788194, Length=286, Percent_Identity=55.9440559440559, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=43.8247011952191, Blast_Score=201, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57043; Mature: 57043

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNAKVRTQLMVAFGTMGVLILFMSLFGLAALGDATTRFQGYVHGIGARTAMTAQLRTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHH
IDERAIAARNIVLATTPAEVQTEKSRGEQAHAQVQKSMAELKQLMAQATDTSDKARALVA
HHHHHHHHCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QMDRIEQSYAPVALGIIDLAARGERDAAITKLNRECRPLLDQFAAVTSEYAQLSRSRAHE
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADDAEDRLGAERTALIAAAVLAFIIATVAGLVITRRLTGALGGEPAELRQIAEQVASGD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
LSPMQRQGAVVPGSVLASLASMHSTLAHIVTDVRLASDSISTGSSEIATGNADLSRRTEL
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
QASALQETASAMEELSATVRHNADNARTASQLATGATDVANRGGQIVEQVVDTMQEISAS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCC
SRQITDITGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSAQAAKEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
RALILGSVEKVDRGAALVSQAGTTMAEIVAEIRRVSEIVGEISVASAEQSDGVLQVGQAV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AQMDQATQQNAALVEEGAAAAASLRDQARRLDQSVSVFRVPGIAGGAAATGAGIGSETQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHCCCCCCCCCCC
GHRLALR
CCCCCCC
>Mature Secondary Structure
MNKNAKVRTQLMVAFGTMGVLILFMSLFGLAALGDATTRFQGYVHGIGARTAMTAQLRTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHH
IDERAIAARNIVLATTPAEVQTEKSRGEQAHAQVQKSMAELKQLMAQATDTSDKARALVA
HHHHHHHHCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QMDRIEQSYAPVALGIIDLAARGERDAAITKLNRECRPLLDQFAAVTSEYAQLSRSRAHE
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADDAEDRLGAERTALIAAAVLAFIIATVAGLVITRRLTGALGGEPAELRQIAEQVASGD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
LSPMQRQGAVVPGSVLASLASMHSTLAHIVTDVRLASDSISTGSSEIATGNADLSRRTEL
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
QASALQETASAMEELSATVRHNADNARTASQLATGATDVANRGGQIVEQVVDTMQEISAS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCC
SRQITDITGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSAQAAKEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
RALILGSVEKVDRGAALVSQAGTTMAEIVAEIRRVSEIVGEISVASAEQSDGVLQVGQAV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AQMDQATQQNAALVEEGAAAAASLRDQARRLDQSVSVFRVPGIAGGAAATGAGIGSETQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHCCCCCCCCCCC
GHRLALR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]