| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610916
Identifier: 120610916
GI number: 120610916
Start: 2462957
End: 2465041
Strand: Reverse
Name: 120610916
Synonym: Aave_2242
Alternate gene names: NA
Gene position: 2465041-2462957 (Counterclockwise)
Preceding gene: 120610918
Following gene: 120610912
Centisome position: 46.05
GC content: 72.76
Gene sequence:
>2085_bases ATGCGCACGGCCGGGCTGCAGCCCCTCCCTTCCAGCTCCGGACGTATCCCGCAAGTGACTTCCTGCCTGCCGCTCCCCTC CTGCCCCCGGACCTCCGCCAGCGGGTCGTCCGTGACGAGGCGACTGGCGTTCTGCGCGATGCTGCTCTGCCTCGCCTCGC TGCTGGCGGGATGCGCGGGCGTCACCGTCTCGGCCGTATCGCCGCGCGACTACCTCGCGCAGCGCCGCGGCGACGTGCTC ACCACCGGGCGGCTGAGCGAGGCCTCCGAGGAGGTGCTGCGCGTCCTGGGCGCCGACGTCGATGCCTGCGGCCAGGACAT GCCCGCCTGCCGGCAGATGCTCGCGGCCTCGGCGGGCGTTGACGAGGAGCAGCGCCTGTCCACCCTGGCGGAACTCTGGC TGCTCGCCGCCCTGCGGGCCAGCGGCGAGCGCAGGGTCGCCGGCCCCGGTGCCGAGGCCCCCGCCAGCGAGGACCAGCAG CTGGACGCCTGGCTGGAGACCGCCCGTCACGCCTGGGCCTACCTCTTCTTCACGCCGCGCGGCCCGGAAGAGCGCGCCTT CGAGGACCGCCAGACCCAGGTGCGCGACTACTACAACTTCGCCACCCAGCAGGCCCTGGCGGGCATGTTCCCGCGCTACC GCCGCGCCGTGGCGGCGGAGGGAGGCGACCTGCCGCCCGGCAGGCGCCTGCAATGGGGCAGCTGGCGCGTGCGCAGCGAT GTCTCCGACCTGCGCCTGCCCAGCGGAGCGCCCGAACCCAGCGAACTGATCGCCGCTTCCACGCTGCGGTTCTCGGGCCT GCGCAACACCTACCGCCGCGACGGGTTCGGCGCCGAGCTGGTCACCGCCATGCACCCTGCGGGCGATGCTCCCCTGCCCG GCGGCCAGCGCCGCAGCGCCCTGCAGGCGGCCTCGGATGCGGAGCAGCCCTTCCGCGAAATGCCCTATCCCGCCGCCACC GCCTTGCTGCGCTTCGACGCAAGCACGCTCGGCGAGGTGCTGCAGACGCATGACGTGCAGGTCGAACTCTACGACCCCTA CCACACGGCGCAGGTCGTGGTCGCAGGGCGCCGGGTGCCGCTGGCCGGCAATTTCACGGCGGGCTACGGCCTGTGGCTCG CGCGCTCAGGGTTCGCGGCACAAGCCATGCGCAGCCTGCTGGGCATGGAAGACGGCCTGTCGGCACCGCGCATCCACCTC ATGCAGCCCTACGATCCCTCGCGGCGCACCATCGTCATGCTGCACGGTCTCGCGAGCAGCCCGGAGGCGTGGATCAACGT CGCCAACGAGGTGCTGGGCGACGAGACGCTGCGCCGGAACTACCAGGTGTGGCAGGTGTACTACCCCACCAACCTGCCGC TCTGGGTGAACCGCCAGGCGATCGAGGAGGCGCTGGAGCGCACCGTCGCCCATTTCGACCCGGCGGGCACGGCCACCGCG TCGCGCGGCATGGTGCTGGTGGGCCACAGCATGGGCGGCGTGCTCGCGCGGCTGCTGGTGTCGGACTCCGGCGACGCGCT GTGGGACACCCTGCTCGCGGAGCATCCCCTGTCCCTGGAGGACCGGCAGGCGCTGCAGCCCGAGCTGGACCCGCTGCTGC GTTTCCACGCCCTGCCCCAGGTCGGCCGGGCCATCTTCATCGCCGCGCCGCACCGCGGCACGCCGGTGGCACGGCACCGG ATCACGCGCTGGCTCTCCAACTTCGTCACCCTGCCCCTGGCGACCATGGAGCGGTTCGCGGACGTCACCCGCCGGCTCTC GCGCACCGAGGCGCCGGAAGGCGGCAGCAGCGTGGTGCGCCTGCCCAACAGCATCGACAACCTGAGCGACACCGATCCCT TTGTCCAGGCCGCCGCGCGCCTGCCGGTGTCCCCGCGCGTGCCCTACCACTCCATCATGGGCCGGGAATCGGAGGACGGC CCGCTGTCGGCATCGACCGACGGCGTCGTGCCCTATGCCAGCGCGCACCTGGAAGGGGCCGTGTCCGAGCGGATCATTCC CTCCGGCCACAGCGTGCAGGAGCAGCCCGCCGCCATCCTGGAAATCCGGCGCATCCTGCGGGACCACCTGTCCGCGGGCA GGTAG
Upstream 100 bases:
>100_bases GCCGCCCGCAGGCGGTGATTCGAATGAAACCTCATACCCTGCCGAGGGTACTGCAGCGGTGCGCCCCCCGGCCGCCCCGG GGGCATCCGCCGCGTGTAGC
Downstream 100 bases:
>100_bases CCCGCCGGCCGCCCCGGCTCAGGCGCCCAGCCGGGCGAAGGTCGCCCGCGGCAGACGCGGTACCGCGCCATCCGCCTGCC CGCCCACCCGGAACACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MRTAGLQPLPSSSGRIPQVTSCLPLPSCPRTSASGSSVTRRLAFCAMLLCLASLLAGCAGVTVSAVSPRDYLAQRRGDVL TTGRLSEASEEVLRVLGADVDACGQDMPACRQMLAASAGVDEEQRLSTLAELWLLAALRASGERRVAGPGAEAPASEDQQ LDAWLETARHAWAYLFFTPRGPEERAFEDRQTQVRDYYNFATQQALAGMFPRYRRAVAAEGGDLPPGRRLQWGSWRVRSD VSDLRLPSGAPEPSELIAASTLRFSGLRNTYRRDGFGAELVTAMHPAGDAPLPGGQRRSALQAASDAEQPFREMPYPAAT ALLRFDASTLGEVLQTHDVQVELYDPYHTAQVVVAGRRVPLAGNFTAGYGLWLARSGFAAQAMRSLLGMEDGLSAPRIHL MQPYDPSRRTIVMLHGLASSPEAWINVANEVLGDETLRRNYQVWQVYYPTNLPLWVNRQAIEEALERTVAHFDPAGTATA SRGMVLVGHSMGGVLARLLVSDSGDALWDTLLAEHPLSLEDRQALQPELDPLLRFHALPQVGRAIFIAAPHRGTPVARHR ITRWLSNFVTLPLATMERFADVTRRLSRTEAPEGGSSVVRLPNSIDNLSDTDPFVQAAARLPVSPRVPYHSIMGRESEDG PLSASTDGVVPYASAHLEGAVSERIIPSGHSVQEQPAAILEIRRILRDHLSAGR
Sequences:
>Translated_694_residues MRTAGLQPLPSSSGRIPQVTSCLPLPSCPRTSASGSSVTRRLAFCAMLLCLASLLAGCAGVTVSAVSPRDYLAQRRGDVL TTGRLSEASEEVLRVLGADVDACGQDMPACRQMLAASAGVDEEQRLSTLAELWLLAALRASGERRVAGPGAEAPASEDQQ LDAWLETARHAWAYLFFTPRGPEERAFEDRQTQVRDYYNFATQQALAGMFPRYRRAVAAEGGDLPPGRRLQWGSWRVRSD VSDLRLPSGAPEPSELIAASTLRFSGLRNTYRRDGFGAELVTAMHPAGDAPLPGGQRRSALQAASDAEQPFREMPYPAAT ALLRFDASTLGEVLQTHDVQVELYDPYHTAQVVVAGRRVPLAGNFTAGYGLWLARSGFAAQAMRSLLGMEDGLSAPRIHL MQPYDPSRRTIVMLHGLASSPEAWINVANEVLGDETLRRNYQVWQVYYPTNLPLWVNRQAIEEALERTVAHFDPAGTATA SRGMVLVGHSMGGVLARLLVSDSGDALWDTLLAEHPLSLEDRQALQPELDPLLRFHALPQVGRAIFIAAPHRGTPVARHR ITRWLSNFVTLPLATMERFADVTRRLSRTEAPEGGSSVVRLPNSIDNLSDTDPFVQAAARLPVSPRVPYHSIMGRESEDG PLSASTDGVVPYASAHLEGAVSERIIPSGHSVQEQPAAILEIRRILRDHLSAGR >Mature_694_residues MRTAGLQPLPSSSGRIPQVTSCLPLPSCPRTSASGSSVTRRLAFCAMLLCLASLLAGCAGVTVSAVSPRDYLAQRRGDVL TTGRLSEASEEVLRVLGADVDACGQDMPACRQMLAASAGVDEEQRLSTLAELWLLAALRASGERRVAGPGAEAPASEDQQ LDAWLETARHAWAYLFFTPRGPEERAFEDRQTQVRDYYNFATQQALAGMFPRYRRAVAAEGGDLPPGRRLQWGSWRVRSD VSDLRLPSGAPEPSELIAASTLRFSGLRNTYRRDGFGAELVTAMHPAGDAPLPGGQRRSALQAASDAEQPFREMPYPAAT ALLRFDASTLGEVLQTHDVQVELYDPYHTAQVVVAGRRVPLAGNFTAGYGLWLARSGFAAQAMRSLLGMEDGLSAPRIHL MQPYDPSRRTIVMLHGLASSPEAWINVANEVLGDETLRRNYQVWQVYYPTNLPLWVNRQAIEEALERTVAHFDPAGTATA SRGMVLVGHSMGGVLARLLVSDSGDALWDTLLAEHPLSLEDRQALQPELDPLLRFHALPQVGRAIFIAAPHRGTPVARHR ITRWLSNFVTLPLATMERFADVTRRLSRTEAPEGGSSVVRLPNSIDNLSDTDPFVQAAARLPVSPRVPYHSIMGRESEDG PLSASTDGVVPYASAHLEGAVSERIIPSGHSVQEQPAAILEIRRILRDHLSAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75463; Mature: 75463
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAGLQPLPSSSGRIPQVTSCLPLPSCPRTSASGSSVTRRLAFCAMLLCLASLLAGCAG CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC VTVSAVSPRDYLAQRRGDVLTTGRLSEASEEVLRVLGADVDACGQDMPACRQMLAASAGV CEEEECCCHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCC DEEQRLSTLAELWLLAALRASGERRVAGPGAEAPASEDQQLDAWLETARHAWAYLFFTPR CHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCC GPEERAFEDRQTQVRDYYNFATQQALAGMFPRYRRAVAAEGGDLPPGRRLQWGSWRVRSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCC VSDLRLPSGAPEPSELIAASTLRFSGLRNTYRRDGFGAELVTAMHPAGDAPLPGGQRRSA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHH LQAASDAEQPFREMPYPAATALLRFDASTLGEVLQTHDVQVELYDPYHTAQVVVAGRRVP HHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCC LAGNFTAGYGLWLARSGFAAQAMRSLLGMEDGLSAPRIHLMQPYDPSRRTIVMLHGLASS CCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCC PEAWINVANEVLGDETLRRNYQVWQVYYPTNLPLWVNRQAIEEALERTVAHFDPAGTATA CHHHHHHHHHHHCHHHHHCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHCCCCCCCCC SRGMVLVGHSMGGVLARLLVSDSGDALWDTLLAEHPLSLEDRQALQPELDPLLRFHALPQ CCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHH VGRAIFIAAPHRGTPVARHRITRWLSNFVTLPLATMERFADVTRRLSRTEAPEGGSSVVR HCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE LPNSIDNLSDTDPFVQAAARLPVSPRVPYHSIMGRESEDGPLSASTDGVVPYASAHLEGA CCCHHCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH VSERIIPSGHSVQEQPAAILEIRRILRDHLSAGR HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTAGLQPLPSSSGRIPQVTSCLPLPSCPRTSASGSSVTRRLAFCAMLLCLASLLAGCAG CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC VTVSAVSPRDYLAQRRGDVLTTGRLSEASEEVLRVLGADVDACGQDMPACRQMLAASAGV CEEEECCCHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCC DEEQRLSTLAELWLLAALRASGERRVAGPGAEAPASEDQQLDAWLETARHAWAYLFFTPR CHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCC GPEERAFEDRQTQVRDYYNFATQQALAGMFPRYRRAVAAEGGDLPPGRRLQWGSWRVRSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCC VSDLRLPSGAPEPSELIAASTLRFSGLRNTYRRDGFGAELVTAMHPAGDAPLPGGQRRSA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHH LQAASDAEQPFREMPYPAATALLRFDASTLGEVLQTHDVQVELYDPYHTAQVVVAGRRVP HHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCC LAGNFTAGYGLWLARSGFAAQAMRSLLGMEDGLSAPRIHLMQPYDPSRRTIVMLHGLASS CCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCC PEAWINVANEVLGDETLRRNYQVWQVYYPTNLPLWVNRQAIEEALERTVAHFDPAGTATA CHHHHHHHHHHHCHHHHHCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHCCCCCCCCC SRGMVLVGHSMGGVLARLLVSDSGDALWDTLLAEHPLSLEDRQALQPELDPLLRFHALPQ CCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHH VGRAIFIAAPHRGTPVARHRITRWLSNFVTLPLATMERFADVTRRLSRTEAPEGGSSVVR HCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE LPNSIDNLSDTDPFVQAAARLPVSPRVPYHSIMGRESEDGPLSASTDGVVPYASAHLEGA CCCHHCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH VSERIIPSGHSVQEQPAAILEIRRILRDHLSAGR HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA