Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610890

Identifier: 120610890

GI number: 120610890

Start: 2437307

End: 2438065

Strand: Direct

Name: 120610890

Synonym: Aave_2216

Alternate gene names: NA

Gene position: 2437307-2438065 (Clockwise)

Preceding gene: 120610887

Following gene: 120610898

Centisome position: 45.53

GC content: 75.89

Gene sequence:

>759_bases
ATGGCGGAAACGGGATGGATGCAGGCATGGGCGCCGGATGCGCTGGCGGCGGCGCTGGTGTTCGTGCTGGCGGGCCTGGT
GAAGGGCGTGGTCGGGCTCGGGCTGCCCACCGTGTCCATGGCGCTGCTCGCGCTCTGGATGTCCCCGGCGCAAGCCGCCG
CGCTGCTGGTGGTGCCTTCGCTCGCGACCAATGTCTGGCAGATGGGGCCCTGGCGCGAGGCGCGCGCGCTGCTGCGGCGG
CATGCCGGGCTGCAGGCGGGCATCTGCGCAGGCACCTGGCTGGGCGCATGGTGGCTGGGCCCGCCGCAGGGGGCGGGCGC
GCGCATGGCGCTGGGGGCGGCGCTCATCGCCTACGCGGGCTGGTCGCTGTCGGGCGCGCGGCTGCCGGCCATGGCCGGCA
AGCCCTCCCACGCACTCGGGTTCGCCGTGGGGGCCGTCACGGGCGCCATCACCGCGGCGACGGGCGTGTTCGTGGTGCCG
GCCGTTCCCTACCTGCAGGCGCTGGGTCTGCAGCGCGATGCGCTGGTGCGGGCGATGGGGTCGTGCTTCACCGTGTCCAC
GCTCGCGCTGGGCGCGGGCCTGGCATCGCAGGCCCGGCTGCCGGCCGCCACGCTGGCCGGTTCGGTGCTGCTGCTCGCGC
CGGCACTGGCGGGCATGGCCCTCGGCGGCCGCCTGCGGCGGCACCTGTCGCAGGAAGCCTTCCGCCGCTGCCTGATGGTC
GGGCTGCTGGCGCTCGGCCTGGGCATGCTGTTCGGGTAG

Upstream 100 bases:

>100_bases
TCGCTGCAGGTGCCCGGGATGGGGCCTGGCACGGTGCTTCCGGCCGGGCCGCGACGCATGCCACGGCACCGGTGGACGGC
GATGGCAACAGGAGCGGAGC

Downstream 100 bases:

>100_bases
TGTCCGGGCGCCAGCCATGCGTCAGGCGCGGCGGGCAGGTCACACCCGCTGCTTGCCGAGCTTGCGGGTGAGCGTGCGGC
GATGCATGCCGAGGCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPSLATNVWQMGPWREARALLRR
HAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAGWSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVP
AVPYLQALGLQRDALVRAMGSCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV
GLLALGLGMLFG

Sequences:

>Translated_252_residues
MAETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPSLATNVWQMGPWREARALLRR
HAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAGWSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVP
AVPYLQALGLQRDALVRAMGSCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV
GLLALGLGMLFG
>Mature_251_residues
AETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPSLATNVWQMGPWREARALLRRH
AGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAGWSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVPA
VPYLQALGLQRDALVRAMGSCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMVG
LLALGLGMLFG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25550; Mature: 25419

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH
LATNVWQMGPWREARALLRRHAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAG
HHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
WSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVPAVPYLQALGLQRDALVRAMG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV
HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLALGLGMLFG
HHHHHHHHHHCC
>Mature Secondary Structure 
AETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH
LATNVWQMGPWREARALLRRHAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAG
HHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
WSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVPAVPYLQALGLQRDALVRAMG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV
HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLALGLGMLFG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA