Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610890
Identifier: 120610890
GI number: 120610890
Start: 2437307
End: 2438065
Strand: Direct
Name: 120610890
Synonym: Aave_2216
Alternate gene names: NA
Gene position: 2437307-2438065 (Clockwise)
Preceding gene: 120610887
Following gene: 120610898
Centisome position: 45.53
GC content: 75.89
Gene sequence:
>759_bases ATGGCGGAAACGGGATGGATGCAGGCATGGGCGCCGGATGCGCTGGCGGCGGCGCTGGTGTTCGTGCTGGCGGGCCTGGT GAAGGGCGTGGTCGGGCTCGGGCTGCCCACCGTGTCCATGGCGCTGCTCGCGCTCTGGATGTCCCCGGCGCAAGCCGCCG CGCTGCTGGTGGTGCCTTCGCTCGCGACCAATGTCTGGCAGATGGGGCCCTGGCGCGAGGCGCGCGCGCTGCTGCGGCGG CATGCCGGGCTGCAGGCGGGCATCTGCGCAGGCACCTGGCTGGGCGCATGGTGGCTGGGCCCGCCGCAGGGGGCGGGCGC GCGCATGGCGCTGGGGGCGGCGCTCATCGCCTACGCGGGCTGGTCGCTGTCGGGCGCGCGGCTGCCGGCCATGGCCGGCA AGCCCTCCCACGCACTCGGGTTCGCCGTGGGGGCCGTCACGGGCGCCATCACCGCGGCGACGGGCGTGTTCGTGGTGCCG GCCGTTCCCTACCTGCAGGCGCTGGGTCTGCAGCGCGATGCGCTGGTGCGGGCGATGGGGTCGTGCTTCACCGTGTCCAC GCTCGCGCTGGGCGCGGGCCTGGCATCGCAGGCCCGGCTGCCGGCCGCCACGCTGGCCGGTTCGGTGCTGCTGCTCGCGC CGGCACTGGCGGGCATGGCCCTCGGCGGCCGCCTGCGGCGGCACCTGTCGCAGGAAGCCTTCCGCCGCTGCCTGATGGTC GGGCTGCTGGCGCTCGGCCTGGGCATGCTGTTCGGGTAG
Upstream 100 bases:
>100_bases TCGCTGCAGGTGCCCGGGATGGGGCCTGGCACGGTGCTTCCGGCCGGGCCGCGACGCATGCCACGGCACCGGTGGACGGC GATGGCAACAGGAGCGGAGC
Downstream 100 bases:
>100_bases TGTCCGGGCGCCAGCCATGCGTCAGGCGCGGCGGGCAGGTCACACCCGCTGCTTGCCGAGCTTGCGGGTGAGCGTGCGGC GATGCATGCCGAGGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MAETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPSLATNVWQMGPWREARALLRR HAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAGWSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVP AVPYLQALGLQRDALVRAMGSCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV GLLALGLGMLFG
Sequences:
>Translated_252_residues MAETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPSLATNVWQMGPWREARALLRR HAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAGWSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVP AVPYLQALGLQRDALVRAMGSCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV GLLALGLGMLFG >Mature_251_residues AETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPSLATNVWQMGPWREARALLRRH AGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAGWSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVPA VPYLQALGLQRDALVRAMGSCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMVG LLALGLGMLFG
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25550; Mature: 25419
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH LATNVWQMGPWREARALLRRHAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAG HHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC WSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVPAVPYLQALGLQRDALVRAMG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLALGLGMLFG HHHHHHHHHHCC >Mature Secondary Structure AETGWMQAWAPDALAAALVFVLAGLVKGVVGLGLPTVSMALLALWMSPAQAAALLVVPS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH LATNVWQMGPWREARALLRRHAGLQAGICAGTWLGAWWLGPPQGAGARMALGAALIAYAG HHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC WSLSGARLPAMAGKPSHALGFAVGAVTGAITAATGVFVVPAVPYLQALGLQRDALVRAMG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SCFTVSTLALGAGLASQARLPAATLAGSVLLLAPALAGMALGGRLRRHLSQEAFRRCLMV HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLALGLGMLFG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA