Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610887

Identifier: 120610887

GI number: 120610887

Start: 2434257

End: 2434688

Strand: Direct

Name: 120610887

Synonym: Aave_2213

Alternate gene names: NA

Gene position: 2434257-2434688 (Clockwise)

Preceding gene: 120610885

Following gene: 120610890

Centisome position: 45.48

GC content: 75.46

Gene sequence:

>432_bases
ATGCCTCTTTCCCTCTTCGCCTCGCCCCGTTTCCTTCCCCGCGTCCTCTGGGTGGACGCTGCCGGATGCGCGGCAGCCGG
TGCGGTGCAGTGCGCGGCCGCCGGGCCGCTCGGCGCCGCCACCGGCCTGCCTGCCGCGCTGCTGTCCGCCACCGGCTGGT
TCCTGCTGGCCTACGCAGCGGCAGCCGCCTGGATCGCGACCCGGCGCAGGATGCCGCGGGCGCCGATCTTCCTGCTGGCC
ACCGGCAACCTGGGCTGGGCCGTGGGCTGCATCGCCCTGGCCTTCGCCGGCCCGTGGGATCTGCCGGGTTATGGCGTCGC
CTGGCTCATGGCCCAGGGCGCTTTCGCGCTGGTGCTGGGGGAGCTGCAGTGGATGGGGCTGCGCCACCAGGACCCGGCCG
GCTTCGCGGCGGGGCAGCCGCGCACGGCCTGA

Upstream 100 bases:

>100_bases
CTCGGGTCATGGACTGCCCGCGGAGAGGGGCCGACCATGCGGTCCCAGGGTACGGAACGGGTCCGTGCCCCGTCCCCATC
CACCACGCAAGGAGCCTTCC

Downstream 100 bases:

>100_bases
CGCTGCCTGCGCGCGCCGTCAGGGCCGTGCCTGCGCGGGCTCCGCGGTGGCCGGATCGAGGATGCGCGCGAGCATCGCGC
CTTCCGCCGGGCCTTCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAAAAAWIATRRRMPRAPIFLLA
TGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLGELQWMGLRHQDPAGFAAGQPRTA

Sequences:

>Translated_143_residues
MPLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAAAAAWIATRRRMPRAPIFLLA
TGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLGELQWMGLRHQDPAGFAAGQPRTA
>Mature_142_residues
PLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAAAAAWIATRRRMPRAPIFLLAT
GNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLGELQWMGLRHQDPAGFAAGQPRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14689; Mature: 14558

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAA
CCCCCCCCCCCHHHEEEEECCCCHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AAAWIATRRRMPRAPIFLLATGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLG
HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHH
ELQWMGLRHQDPAGFAAGQPRTA
HHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAA
CCCCCCCCCCHHHEEEEECCCCHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AAAWIATRRRMPRAPIFLLATGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLG
HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHH
ELQWMGLRHQDPAGFAAGQPRTA
HHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA