Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610887
Identifier: 120610887
GI number: 120610887
Start: 2434257
End: 2434688
Strand: Direct
Name: 120610887
Synonym: Aave_2213
Alternate gene names: NA
Gene position: 2434257-2434688 (Clockwise)
Preceding gene: 120610885
Following gene: 120610890
Centisome position: 45.48
GC content: 75.46
Gene sequence:
>432_bases ATGCCTCTTTCCCTCTTCGCCTCGCCCCGTTTCCTTCCCCGCGTCCTCTGGGTGGACGCTGCCGGATGCGCGGCAGCCGG TGCGGTGCAGTGCGCGGCCGCCGGGCCGCTCGGCGCCGCCACCGGCCTGCCTGCCGCGCTGCTGTCCGCCACCGGCTGGT TCCTGCTGGCCTACGCAGCGGCAGCCGCCTGGATCGCGACCCGGCGCAGGATGCCGCGGGCGCCGATCTTCCTGCTGGCC ACCGGCAACCTGGGCTGGGCCGTGGGCTGCATCGCCCTGGCCTTCGCCGGCCCGTGGGATCTGCCGGGTTATGGCGTCGC CTGGCTCATGGCCCAGGGCGCTTTCGCGCTGGTGCTGGGGGAGCTGCAGTGGATGGGGCTGCGCCACCAGGACCCGGCCG GCTTCGCGGCGGGGCAGCCGCGCACGGCCTGA
Upstream 100 bases:
>100_bases CTCGGGTCATGGACTGCCCGCGGAGAGGGGCCGACCATGCGGTCCCAGGGTACGGAACGGGTCCGTGCCCCGTCCCCATC CACCACGCAAGGAGCCTTCC
Downstream 100 bases:
>100_bases CGCTGCCTGCGCGCGCCGTCAGGGCCGTGCCTGCGCGGGCTCCGCGGTGGCCGGATCGAGGATGCGCGCGAGCATCGCGC CTTCCGCCGGGCCTTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAAAAAWIATRRRMPRAPIFLLA TGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLGELQWMGLRHQDPAGFAAGQPRTA
Sequences:
>Translated_143_residues MPLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAAAAAWIATRRRMPRAPIFLLA TGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLGELQWMGLRHQDPAGFAAGQPRTA >Mature_142_residues PLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAAAAAWIATRRRMPRAPIFLLAT GNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLGELQWMGLRHQDPAGFAAGQPRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14689; Mature: 14558
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAA CCCCCCCCCCCHHHEEEEECCCCHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAAWIATRRRMPRAPIFLLATGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLG HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHH ELQWMGLRHQDPAGFAAGQPRTA HHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSLFASPRFLPRVLWVDAAGCAAAGAVQCAAAGPLGAATGLPAALLSATGWFLLAYAA CCCCCCCCCCHHHEEEEECCCCHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAAWIATRRRMPRAPIFLLATGNLGWAVGCIALAFAGPWDLPGYGVAWLMAQGAFALVLG HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHH ELQWMGLRHQDPAGFAAGQPRTA HHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA