Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610110
Identifier: 120610110
GI number: 120610110
Start: 1563379
End: 1564335
Strand: Direct
Name: 120610110
Synonym: Aave_1423
Alternate gene names: NA
Gene position: 1563379-1564335 (Clockwise)
Preceding gene: 120610109
Following gene: 120610111
Centisome position: 29.21
GC content: 73.77
Gene sequence:
>957_bases ATGAGTGAGCCGGTGGCGCAGGACGCACAGATTTCCAGCGCGGAAGTGGAACGGGCATTGGCGGACGCCGCCGCCGCGGG CGCGATGCTGAGGCAGGCGCGCGAGCAGGCGGGCATGCACGTCGCCGCGTTGGCCGTGTCGCTCAAGGTGCCGGTGCACA AGCTCGAAGCCCTGGAGGTGGGCGACCTCGGCGTGTTCCCGGATGCCGTTTTCGTCCGCGCGCTGGTGTCCAGCATCTGC CGCACCCTCAAGATCGATGCGGCGCCCGTGCTGGCGCTGCTGCCGCAGAACCAGGCCCCCCGGCTTTCCTCCCACGAGGG CATCAACGCATCGTTCAAGCCGGGGTCCGCCAAGCTCGCATCCTCGTCCGCCGCGCCCGGTTCGCGCAAGGTCGCGTTCG CCGTCGCCTTCCTGCTGGTGGCCGCCGTGGCCCTGGTCTTCGTTCCCAGGGAATGGTTCGACCGCCTGCAGGGCGCCCCG TCGGCCGTGACCGACGAGCCGTCGGGTGTCCAGGAGGCCGCCCGGGCCGGCGGCGCGCCCCCGGCCCCGGTGGCCGGGAC GGTGTCCGAGCCGGTGCTGCTGCGCCAGGAAACCCTGGTGGGCGGCGCGCCGCTGCCGCCTGCTCCCGTGGCCTCGTCGG CCGTGGCTGCGTCCAGCGCACCCGCCGCGGCGCCGGTCGTCGCTGCCGCCGCGTCGGCGCCCGCCAGTGCCGAGGCCGCG CAGAGTGCCCTCGTCATCCGTGCCCGCGGGGATTCCTGGGTCCAGGTGCGCGCGGCGACGGGCGCCACCGTCCTGCAGAA GCTGGTGCGCGCCGGGGAAACGGTGGCGGTGCCCGGCTCTCCCCCATGGTCGGTCGTGGTCGGCAAGGCCGACGCCACCG AGGTCCTGGTGCGTGGCCAGCCCATGGATCTGGCGCCCGTCGCGCGCGAGAACGTTGCCCGGTTCGAGGTGAAATAA
Upstream 100 bases:
>100_bases GCCCTGGGCAATGCCCTGGAGATGCGCCAGCTGGGTGAACAATTGCACAAGCGTTTCCCTGACTCCAAGGAAGTGTTGGC ATTCGATCGGGGAGCATTCA
Downstream 100 bases:
>100_bases GTGATCCACACTCCCAATGCCGAATCCCCCATCGCCATGGCATCGCCGCTGCCGCGGCGGTCGCGCCAGGCACGCATCGC CTGGGGCGACCGGGTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSEPVAQDAQISSAEVERALADAAAAGAMLRQAREQAGMHVAALAVSLKVPVHKLEALEVGDLGVFPDAVFVRALVSSIC RTLKIDAAPVLALLPQNQAPRLSSHEGINASFKPGSAKLASSSAAPGSRKVAFAVAFLLVAAVALVFVPREWFDRLQGAP SAVTDEPSGVQEAARAGGAPPAPVAGTVSEPVLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAA QSALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQPMDLAPVARENVARFEVK
Sequences:
>Translated_318_residues MSEPVAQDAQISSAEVERALADAAAAGAMLRQAREQAGMHVAALAVSLKVPVHKLEALEVGDLGVFPDAVFVRALVSSIC RTLKIDAAPVLALLPQNQAPRLSSHEGINASFKPGSAKLASSSAAPGSRKVAFAVAFLLVAAVALVFVPREWFDRLQGAP SAVTDEPSGVQEAARAGGAPPAPVAGTVSEPVLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAA QSALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQPMDLAPVARENVARFEVK >Mature_317_residues SEPVAQDAQISSAEVERALADAAAAGAMLRQAREQAGMHVAALAVSLKVPVHKLEALEVGDLGVFPDAVFVRALVSSICR TLKIDAAPVLALLPQNQAPRLSSHEGINASFKPGSAKLASSSAAPGSRKVAFAVAFLLVAAVALVFVPREWFDRLQGAPS AVTDEPSGVQEAARAGGAPPAPVAGTVSEPVLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAAQ SALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQPMDLAPVARENVARFEVK
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32037; Mature: 31906
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVAQDAQISSAEVERALADAAAAGAMLRQAREQAGMHVAALAVSLKVPVHKLEALEV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCHHHHHEEEE GDLGVFPDAVFVRALVSSICRTLKIDAAPVLALLPQNQAPRLSSHEGINASFKPGSAKLA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHC SSSAAPGSRKVAFAVAFLLVAAVALVFVPREWFDRLQGAPSAVTDEPSGVQEAARAGGAP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCC PAPVAGTVSEPVLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAA CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHH QSALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQ HCEEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEECCCCCCCEEEEECCCCHHHEECCC PMDLAPVARENVARFEVK CCCCCHHHHHCCHHCCCC >Mature Secondary Structure SEPVAQDAQISSAEVERALADAAAAGAMLRQAREQAGMHVAALAVSLKVPVHKLEALEV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCHHHHHEEEE GDLGVFPDAVFVRALVSSICRTLKIDAAPVLALLPQNQAPRLSSHEGINASFKPGSAKLA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHC SSSAAPGSRKVAFAVAFLLVAAVALVFVPREWFDRLQGAPSAVTDEPSGVQEAARAGGAP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCC PAPVAGTVSEPVLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAA CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHH QSALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQ HCEEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEECCCCCCCEEEEECCCCHHHEECCC PMDLAPVARENVARFEVK CCCCCHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA