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The map label for this gene is 120610109

Identifier: 120610109

GI number: 120610109

Start: 1562544

End: 1563386

Strand: Direct

Name: 120610109

Synonym: Aave_1422

Alternate gene names: NA

Gene position: 1562544-1563386 (Clockwise)

Preceding gene: 120610108

Following gene: 120610110

Centisome position: 29.19

GC content: 67.5

Gene sequence:

>843_bases
ATGGTGGAACCCCGATCGTTCCTGCGGCATGCGTCCCGCCACGTCCTCGCGGCCGGCGCAGTCGTGTGCCTGGCGCTGGT
CCTGGGCGGATGCGCTGCCCGGCACGATACCGGCGCCAGCACGGCGGCCGCCCTGGCGCCCGAGTCCAACCCGTCGTCCG
AGGCGGCGGAACTGCGCCGCCGCGCGCGCATCCGGCTGGAACTCGCCGCCAATTACCTGGAAATGGGCCAGACCCAGGTC
GCGCTGGAAGAAGTCCAGCAGGCCATCTCCACCGATCCCTCGTTCGGGGACGGCTACAACCTCCGTGGCCTGGTGTTCAT
GCGCCTGGGCGACTGGCCATCGGCCGACGACAGCTTCCGCCGCGCGCTCGACATCAATCCGCAGGAGCCCTACCTGCTCC
ACAACTACGGCTGGCTGCGCTGCCAGCAGAAGAACTACGCGGAAGCCGGCCGCTTCTTCGACCGCGCGCTGGCCGTGCCT
TCCTACACCGCCCGCGCGAAGACGCTCATGACGCAGGGGCTCTGCCAGGAGCGCGCGGGACAGGTGGCCGAGGCCGAGAA
GACGCTGGCCAAGGCCTACGAACTCGACGCCGGCAATCCGGTGGTGGGTTACAACCTGGCGTCGCTGGCGTTCCGCCGCG
GCGACGCGAAACGGGCGCAGTTCTACAGCCGGCGCCTGAACAACAGCGAACTGGCCAACGCGGAATCGCTCTGGCTGGGT
ATCAAGATCGAGCGCGCCCTGGGCAATGCCCTGGAGATGCGCCAGCTGGGTGAACAATTGCACAAGCGTTTCCCTGACTC
CAAGGAAGTGTTGGCATTCGATCGGGGAGCATTCAATGAGTGA

Upstream 100 bases:

>100_bases
ATGTGAAGGACCGCACCCGGGCGGCCGAACGCATGGCCAGGCAGCGCACGATCGTTCTCAAACCGGTGGCCTGAAGGCCG
CCCCGTTCTGGAGGCTTGAG

Downstream 100 bases:

>100_bases
GCCGGTGGCGCAGGACGCACAGATTTCCAGCGCGGAAGTGGAACGGGCATTGGCGGACGCCGCCGCCGCGGGCGCGATGC
TGAGGCAGGCGCGCGAGCAG

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Fimbrial Biogenesis And Twitching Motility Protein; Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilF; PilF Type IV Pilus Assembly Protein; Type IV Pilus Assembly Protein PilF; TPR Repeat-Containing Pilus Assembly Protein PilF; Type 4 Fimbrial Biogenesis Protein PilF; Type Iv Pilus Biogenesis/Stability Protein Pilw; Tfp Pilus Assembly Protein PilF; Type IV Fimbrial Biogenesis Protein; Protein Involved In Fimbrial Biogenesis; Tpr Repeat Protein; Type 4 Pilus Biogenesis Protein; TPR Domain-Containing Protein; Type IV Pilus Biogenesis Protein Pilf; Lipoprotein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MVEPRSFLRHASRHVLAAGAVVCLALVLGGCAARHDTGASTAAALAPESNPSSEAAELRRRARIRLELAANYLEMGQTQV
ALEEVQQAISTDPSFGDGYNLRGLVFMRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRALAVP
SYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDAKRAQFYSRRLNNSELANAESLWLG
IKIERALGNALEMRQLGEQLHKRFPDSKEVLAFDRGAFNE

Sequences:

>Translated_280_residues
MVEPRSFLRHASRHVLAAGAVVCLALVLGGCAARHDTGASTAAALAPESNPSSEAAELRRRARIRLELAANYLEMGQTQV
ALEEVQQAISTDPSFGDGYNLRGLVFMRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRALAVP
SYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDAKRAQFYSRRLNNSELANAESLWLG
IKIERALGNALEMRQLGEQLHKRFPDSKEVLAFDRGAFNE
>Mature_280_residues
MVEPRSFLRHASRHVLAAGAVVCLALVLGGCAARHDTGASTAAALAPESNPSSEAAELRRRARIRLELAANYLEMGQTQV
ALEEVQQAISTDPSFGDGYNLRGLVFMRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRALAVP
SYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDAKRAQFYSRRLNNSELANAESLWLG
IKIERALGNALEMRQLGEQLHKRFPDSKEVLAFDRGAFNE

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30975; Mature: 30975

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEPRSFLRHASRHVLAAGAVVCLALVLGGCAARHDTGASTAAALAPESNPSSEAAELRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCHHHHHHHH
RARIRLELAANYLEMGQTQVALEEVQQAISTDPSFGDGYNLRGLVFMRLGDWPSADDSFR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHH
RALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRALAVPSYTARAKTLMTQGLCQERAG
HHHCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
QVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDAKRAQFYSRRLNNSELANAESLWLG
CHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHCCCCHHCCHHHEEEE
IKIERALGNALEMRQLGEQLHKRFPDSKEVLAFDRGAFNE
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MVEPRSFLRHASRHVLAAGAVVCLALVLGGCAARHDTGASTAAALAPESNPSSEAAELRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCHHHHHHHH
RARIRLELAANYLEMGQTQVALEEVQQAISTDPSFGDGYNLRGLVFMRLGDWPSADDSFR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHH
RALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRALAVPSYTARAKTLMTQGLCQERAG
HHHCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
QVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDAKRAQFYSRRLNNSELANAESLWLG
CHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHCCCCHHCCHHHEEEE
IKIERALGNALEMRQLGEQLHKRFPDSKEVLAFDRGAFNE
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA