Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is frc [H]

Identifier: 120610076

GI number: 120610076

Start: 1522504

End: 1523739

Strand: Direct

Name: frc [H]

Synonym: Aave_1389

Alternate gene names: 120610076

Gene position: 1522504-1523739 (Clockwise)

Preceding gene: 120610072

Following gene: 120610078

Centisome position: 28.44

GC content: 71.2

Gene sequence:

>1236_bases
ATGACGTTTTCTTCCGCATCCCCGTCCCCGTCCCCGTCCTCTTCCCCGCAACGCCCCCTGCCGCTGTCCGGCCTGCGCGT
GGTGGAGTTCACCCACATGGTCATGGGGCCGACCTGCGGCATGGTGCTGGCCGACCTCGGCGCCGAGGTCATCAAGGTCG
AACCCGTGGACGGCGACCGCACGCGCCACCTGCTGGGCGCGGGCGCGGGCTTCTTCCCCATGTTCAACCGCAACAAGAAG
AGCATCGCCATCGACCTGCGCAGTCCCGGGGGCCTGGAGGTGGCGATCCGCCTCGCGTCCTCCGCCGACGTGGTGGCGCA
GAACTTCAAGCCCGGCGTCATGGCCAAGTACGGCCTGGACTACGGCGCGCTCTCGCGCCTGAACGAAGGGCTGGTGTACG
TGAACCACGCCGGCTTCCTGCCGGGGCCCTACGAGCACCGCACGGCGCTCGACGAGGTGGTGCAGATGATGGGCGGCCTC
GCCTACATGACCGGCCGTCCCGGTGACCCGCTGCGCGCCGGCGCCAGCGTGAACGACATCATGGGCGGCATGTTCGGCGC
CATCGGGGCCATGGCGGCGCTGATGCAGCGCGCGCACACCGGGCGCGGGCAGGAGGTGGATTCCGCGCTGTTCGAGAACA
ACGTGTTCCTGGTGGGCCAGCACATGATGCAGTACGCCGTGACCGGGCAGCCGGCAGCGCCCATGCCGGACCGCATCTCT
TCCTGGGCCGTGTACGACGTGTTCGGCGTGAAGGACGGCGGGCAGATCTTCCTGGCGGCGGTGAGCGACGCGCAGTGGCA
GACCTTCTGCGATGCCATGGGCTACGCCGATCTGAAAGCCGACCCGGCCCTGGCCACCAACAACGACCGCGTGCGGGCCC
GGGGCACGTTGTTGCCGGAGCTGCGGCGGCGCCTCGCGCAGCACACGGCCGACGCGCTCGCCGCCATCTTCGAGCGCCAC
GGCCTGCCGTTCGCGCCCATCCTGCGGCCCGAACAGCTCTTCGACGATCCCCACCTGAACGCCACCGGCGGCCTGGCCGA
AGTCACGCTGCCCGACGGCGATCGCGCCGGCGAGCGAGCGCGCGTCACCCTCCTGCCGCTGCGCATGGACGGCGGACGCC
TGCCCGTGCGCGCCGATCCGCCGCGCCTGGGCGAACACACGCGCGAACTGCTCGAAAGCCTGGGATACGCCCCGGACGCC
ATCGACGCGCTGCGCGAGGCCCGCGCCGTGGCCTGA

Upstream 100 bases:

>100_bases
CAGGTGTTACCGGCCTGTTGCATTCCCGCCGTGGAATCTCCCCCACGGCAGGCCCGGCGGGGGCGGCGGTGCCGCGTGCC
CGTGGGACACTTGCGGTCCC

Downstream 100 bases:

>100_bases
CCAGCCGCCGGCCTGCCGCAGGGGGACGTCAGCAGGCCCCGGAGCGGGGCGCCTGCGGCCGGGCCCGCGTCGCGAGCCAG
CACAGCACCGCGCCGCCGCA

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTFSSASPSPSPSSSPQRPLPLSGLRVVEFTHMVMGPTCGMVLADLGAEVIKVEPVDGDRTRHLLGAGAGFFPMFNRNKK
SIAIDLRSPGGLEVAIRLASSADVVAQNFKPGVMAKYGLDYGALSRLNEGLVYVNHAGFLPGPYEHRTALDEVVQMMGGL
AYMTGRPGDPLRAGASVNDIMGGMFGAIGAMAALMQRAHTGRGQEVDSALFENNVFLVGQHMMQYAVTGQPAAPMPDRIS
SWAVYDVFGVKDGGQIFLAAVSDAQWQTFCDAMGYADLKADPALATNNDRVRARGTLLPELRRRLAQHTADALAAIFERH
GLPFAPILRPEQLFDDPHLNATGGLAEVTLPDGDRAGERARVTLLPLRMDGGRLPVRADPPRLGEHTRELLESLGYAPDA
IDALREARAVA

Sequences:

>Translated_411_residues
MTFSSASPSPSPSSSPQRPLPLSGLRVVEFTHMVMGPTCGMVLADLGAEVIKVEPVDGDRTRHLLGAGAGFFPMFNRNKK
SIAIDLRSPGGLEVAIRLASSADVVAQNFKPGVMAKYGLDYGALSRLNEGLVYVNHAGFLPGPYEHRTALDEVVQMMGGL
AYMTGRPGDPLRAGASVNDIMGGMFGAIGAMAALMQRAHTGRGQEVDSALFENNVFLVGQHMMQYAVTGQPAAPMPDRIS
SWAVYDVFGVKDGGQIFLAAVSDAQWQTFCDAMGYADLKADPALATNNDRVRARGTLLPELRRRLAQHTADALAAIFERH
GLPFAPILRPEQLFDDPHLNATGGLAEVTLPDGDRAGERARVTLLPLRMDGGRLPVRADPPRLGEHTRELLESLGYAPDA
IDALREARAVA
>Mature_410_residues
TFSSASPSPSPSSSPQRPLPLSGLRVVEFTHMVMGPTCGMVLADLGAEVIKVEPVDGDRTRHLLGAGAGFFPMFNRNKKS
IAIDLRSPGGLEVAIRLASSADVVAQNFKPGVMAKYGLDYGALSRLNEGLVYVNHAGFLPGPYEHRTALDEVVQMMGGLA
YMTGRPGDPLRAGASVNDIMGGMFGAIGAMAALMQRAHTGRGQEVDSALFENNVFLVGQHMMQYAVTGQPAAPMPDRISS
WAVYDVFGVKDGGQIFLAAVSDAQWQTFCDAMGYADLKADPALATNNDRVRARGTLLPELRRRLAQHTADALAAIFERHG
LPFAPILRPEQLFDDPHLNATGGLAEVTLPDGDRAGERARVTLLPLRMDGGRLPVRADPPRLGEHTRELLESLGYAPDAI
DALREARAVA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=408, Percent_Identity=30.8823529411765, Blast_Score=184, Evalue=9e-47,
Organism=Homo sapiens, GI300863124, Length=430, Percent_Identity=30, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI13376042, Length=430, Percent_Identity=27.6744186046512, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI300863126, Length=407, Percent_Identity=28.009828009828, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI266456254, Length=403, Percent_Identity=26.5508684863524, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI42794625, Length=403, Percent_Identity=26.5508684863524, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI266458393, Length=203, Percent_Identity=33.0049261083744, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI266458397, Length=203, Percent_Identity=33.0049261083744, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI42822893, Length=120, Percent_Identity=36.6666666666667, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI266458395, Length=120, Percent_Identity=36.6666666666667, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87082093, Length=333, Percent_Identity=31.5315315315315, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1788717, Length=423, Percent_Identity=30.0236406619385, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1786222, Length=393, Percent_Identity=23.9185750636132, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32564160, Length=322, Percent_Identity=26.3975155279503, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115535051, Length=320, Percent_Identity=25.3125, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24648431, Length=400, Percent_Identity=35, Blast_Score=212, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24585488, Length=334, Percent_Identity=26.0479041916168, Blast_Score=98, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43993; Mature: 43862

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSSASPSPSPSSSPQRPLPLSGLRVVEFTHMVMGPTCGMVLADLGAEVIKVEPVDGDR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCH
TRHLLGAGAGFFPMFNRNKKSIAIDLRSPGGLEVAIRLASSADVVAQNFKPGVMAKYGLD
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHCCCCCCEEECCCC
YGALSRLNEGLVYVNHAGFLPGPYEHRTALDEVVQMMGGLAYMTGRPGDPLRAGASVNDI
HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHH
MGGMFGAIGAMAALMQRAHTGRGQEVDSALFENNVFLVGQHMMQYAVTGQPAAPMPDRIS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCHHHC
SWAVYDVFGVKDGGQIFLAAVSDAQWQTFCDAMGYADLKADPALATNNDRVRARGTLLPE
CEEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEECCCCCEEECCCHHHH
LRRRLAQHTADALAAIFERHGLPFAPILRPEQLFDDPHLNATGGLAEVTLPDGDRAGERA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCE
RVTLLPLRMDGGRLPVRADPPRLGEHTRELLESLGYAPDAIDALREARAVA
EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TFSSASPSPSPSSSPQRPLPLSGLRVVEFTHMVMGPTCGMVLADLGAEVIKVEPVDGDR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCH
TRHLLGAGAGFFPMFNRNKKSIAIDLRSPGGLEVAIRLASSADVVAQNFKPGVMAKYGLD
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHCCCCCCEEECCCC
YGALSRLNEGLVYVNHAGFLPGPYEHRTALDEVVQMMGGLAYMTGRPGDPLRAGASVNDI
HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHH
MGGMFGAIGAMAALMQRAHTGRGQEVDSALFENNVFLVGQHMMQYAVTGQPAAPMPDRIS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCHHHC
SWAVYDVFGVKDGGQIFLAAVSDAQWQTFCDAMGYADLKADPALATNNDRVRARGTLLPE
CEEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEECCCCCEEECCCHHHH
LRRRLAQHTADALAAIFERHGLPFAPILRPEQLFDDPHLNATGGLAEVTLPDGDRAGERA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCE
RVTLLPLRMDGGRLPVRADPPRLGEHTRELLESLGYAPDAIDALREARAVA
EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA