Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610072
Identifier: 120610072
GI number: 120610072
Start: 1519712
End: 1520260
Strand: Direct
Name: 120610072
Synonym: Aave_1385
Alternate gene names: NA
Gene position: 1519712-1520260 (Clockwise)
Preceding gene: 120610071
Following gene: 120610076
Centisome position: 28.39
GC content: 73.77
Gene sequence:
>549_bases GTGCGACTCTGCACCGCACTTCGCCACTCGCGGCCGCGTGCCGGATCCACCGTGCTTCTCGTCAAAACCCCCGCCGGCCA GTTGGCTCTCAAGGACCGCCATGGCGGCCTCACGCCGCGCCAGCGTTCCGCGTTCATCCTCTTCGACGGCCGCCGCACCG TGGGGCAGGTGCTGGCCGCCACGGCGGCCATGGGCATCACCATGGACGACGTGCAGGCCATGATCGACCAGGGCCTGCTG GAAAGCCCGGACGGGCGGCCCCTAGTGCGCCCGCAGGCCGCGCCGGCGGCCGGGGGCGAGCGGTCCGCCGCCGAGCCGGG TGAGGTGCCGGTCCCGGCCCCGGCCGCCATGGCGATGGCAGACCGCTACCAGGGCGCTTACCGGGTGGCCACCGAGCTCA CTTCCGGCGCCGGCCTGCGGGGCTTCCGCCTGAACCTGGCGGTGGAGGGGGCGCGCAACGTCGAGGAACTCGCCGCGCTG GCCCCGAAGATCCGCGAGCTGGTCGGCGAGGAAAAGTACCGCCGGCTGCAGGACGCGCTGTTCGGCTGA
Upstream 100 bases:
>100_bases GCGAGCCTCGCGACGCGGCCTGCCCGCGCGCCGGATCGGCCGCCCGGTTGACGGAACGCGCCCCGTATGGAGAAACCCGG ATTCACAAACCCGGGGGCGC
Downstream 100 bases:
>100_bases AGGCCGGCGTCCCGCCCGGCGGTTTCCCCCAGGTCAGTTCTGCAGGTCCACCCGGCCGTAGGCGCCGTTGGCGCCCTGGT TCGGCCCGGCGATGTAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRLCTALRHSRPRAGSTVLLVKTPAGQLALKDRHGGLTPRQRSAFILFDGRRTVGQVLAATAAMGITMDDVQAMIDQGLL ESPDGRPLVRPQAAPAAGGERSAAEPGEVPVPAPAAMAMADRYQGAYRVATELTSGAGLRGFRLNLAVEGARNVEELAAL APKIRELVGEEKYRRLQDALFG
Sequences:
>Translated_182_residues MRLCTALRHSRPRAGSTVLLVKTPAGQLALKDRHGGLTPRQRSAFILFDGRRTVGQVLAATAAMGITMDDVQAMIDQGLL ESPDGRPLVRPQAAPAAGGERSAAEPGEVPVPAPAAMAMADRYQGAYRVATELTSGAGLRGFRLNLAVEGARNVEELAAL APKIRELVGEEKYRRLQDALFG >Mature_182_residues MRLCTALRHSRPRAGSTVLLVKTPAGQLALKDRHGGLTPRQRSAFILFDGRRTVGQVLAATAAMGITMDDVQAMIDQGLL ESPDGRPLVRPQAAPAAGGERSAAEPGEVPVPAPAAMAMADRYQGAYRVATELTSGAGLRGFRLNLAVEGARNVEELAAL APKIRELVGEEKYRRLQDALFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19325; Mature: 19325
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLCTALRHSRPRAGSTVLLVKTPAGQLALKDRHGGLTPRQRSAFILFDGRRTVGQVLAA CCHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHH TAAMGITMDDVQAMIDQGLLESPDGRPLVRPQAAPAAGGERSAAEPGEVPVPAPAAMAMA HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DRYQGAYRVATELTSGAGLRGFRLNLAVEGARNVEELAALAPKIRELVGEEKYRRLQDAL HHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH FG CC >Mature Secondary Structure MRLCTALRHSRPRAGSTVLLVKTPAGQLALKDRHGGLTPRQRSAFILFDGRRTVGQVLAA CCHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHH TAAMGITMDDVQAMIDQGLLESPDGRPLVRPQAAPAAGGERSAAEPGEVPVPAPAAMAMA HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DRYQGAYRVATELTSGAGLRGFRLNLAVEGARNVEELAALAPKIRELVGEEKYRRLQDAL HHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH FG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA