Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is plcN [H]
Identifier: 120610064
GI number: 120610064
Start: 1509383
End: 1511590
Strand: Direct
Name: plcN [H]
Synonym: Aave_1377
Alternate gene names: 120610064
Gene position: 1509383-1511590 (Clockwise)
Preceding gene: 120610063
Following gene: 120610065
Centisome position: 28.2
GC content: 69.29
Gene sequence:
>2208_bases ATGACCCTTGACCCCTCCAAGCGCAAGTTCCTGCAGGCCGCCGCCGGCACCACGGCCGGTGCCGCGGCGCTGGGTTTGTT CCCGCCCAGCATCCGCCGCGCCCTGGCCATTCCCGCCAACCGGCGCACCGGCACGATCAAGGACGTCGAGCACGTCGTCA TACTCATGCAGGAAAACCGCTCGTTCGACCACTACTTCGGCACGCTCGTCGGCGTGCGCGGCTTCGGCGACCGCTTCACC ATTCCCCTGCCGGGCGGGCGCAGCGTCTGGCAGCAGGCCGACCAGAACGGCCAGACCGTACTGCCCTACCACTTGAACCA GGCCGCCGGCAACGCCCAGCGCGTGGACGGCACGCCCCACAGCTGGGAGGATGCGCGCGACGCCTGGGACCGCGGCCGCA TGGCCGAATGGCCGCGCTACAAGCAGCCACAGTCCATGGGTTACTACACGCAGGCCGAAGCCTCGTTCCAGTTCGCGCTG GCCAACGCCTTCACCGTATGCGATGCATATTTCTGCTCGTTGCACGGGGGCACCAATACCAACCGCCTCTTCCACTGGAC CGGCACGAACGGCCCCACGGGGCCGGCCGGCCAGGTGGTGGTGGACAACGCGTGGGATGCGCTGTATTCCGACACCGACA TCCGCACGGGGGGCTATGACTGGATCACCTATCCCGAGCGGTTGCAGCAGGCCGGCGTGTCGTGGATGGTCTATCAGAAC ATGCCCGACAACTTCACCGACAACCCGCTCGTCGGCTTCCGCCAGTACCGCCAAGCCAACCTGGCCTCGGGCAAGCCGGT GTACAGCGACAGCGACGCGAACCCCGCCTACGACCCCGCCAGGGACCAGGCCGGCAATCCGCTCTACAAAGGCATCGCCA ACACCATGCCCGACGGCGGCTTCCTCGGCACCTTCCGCCAGGCCGTGCTCCACGGCAGGCTGCCGCAGGTGTCATGGATC ATCCCGCCGGCAACCTACTGCGAGCACCCCGGTCCTTCCAGCCCCGTGCAGGGCGGCTGGTACGTACAGGAAGTGCTGGA CGCGCTCACCGCCAACCCGGAGGTGTGGAGCAAGACGGTGCTGCTCATCAACTTCGACGAGAACGACGGCTACTTCGACC ACGTGCCGCCTCCGTGCGCGCCGTCGCTGGACGGGCGGGGCGGCACGCTCGGCAAGTCCACCCTGTCCGCGGGCGAAATG GCCTACGAGTACTACACCCATAAACCCTATGCCGACACCGGCATGCCCCCGCCCGATGGCGACTGCTACGGCCCGGGGCC GCGCGTGCCCATGTGGGTAGTCTCCCCCTGGAGTCGCGGCGGCTGGGTGAATTCGCAGAACTTCGACCACACCTCGGTGC TGCGCTTCCTGGAAGCCCGCTTCGGCGTGAAGGAGCCGCAGATCAGCCCCTACCGCCGCGCCGTCTTCGGCGACCTGACC AGCGCATTCAATTTCGCCACGCCCAACGATGCGCCCCTGGCCACCCTGGCCGGCCGGCGCAGCAAGGGCGATGCCGATGC GCTGTGCGACGCCCAGGGCGCGCTGCCGCAGATCGCCGTGCCCTCGCCGCAGGCCCTGCCGCGGCAGGCCACGGGCACGC GGCCTTCCCGTGCCTTGCCCTACGAACTGCACGTGCGCGCGCGGACCCATGCGGCCGGCGGCACGGTGCAACTGGGGTTC TCCAACACCGGCACGGCCGCGGCCGTGTTCCACGTGTATGACCGGCTGCACCTCGACCGCGCCCCCCGGCGCTATATGGT GGAGGCCGGCAAGCAACTGCACGATCACTGGAGCGCGGGCGCGGACGGCGGTGCCTACGACCTCTGGGTGCTGGGCCCCA ACGGCTTCCACCGCTCCTTCGCCGGCAACCTGGCCGCGTTGCGCGGGGCCGTGCCCCATCCCGAGGCGGACGTGTGCTAC GACATCGCCAACGGCAACGCCCATCTCGTGCTCATGATCATGAACCAGGGCAGCGCGAGCGCGGCCCTGCAGGTGAAGTC CAATGCCTACCGCGGCGACGGCCCATGGACCACCACCGTGGCGCCCGGCCAGTCGCAAGAGCTGCAGTGGGACCTCTCGG GCAGCGCGCACTGGTACGACTTCACGCTCACCTGCGACGCGCTGCCGGGCTTTGCACGGCGCTTCGCGGGACGCGTCGAG ACCGGCCGCGACGGGTTGAGCGATCCGGCGATGGGCCTGGCCGGCTGA
Upstream 100 bases:
>100_bases GTACTGCCGAGTTGAGCCGTTTGGCGGCGAAAATCCCGTCATGGGCTGCGCGCCCTGAGCGTGCCGCACCTGTTCGTCCC ATTTTCCTCCACGTTACACC
Downstream 100 bases:
>100_bases CGGCGCAGGAGGGCCGGGCCGCGGGGCGCCGCGTGCTGGCCCGACGCATTCGCATCGCGTCCTTGCCGCCACCAGGGTTT GCGCTGCATTTTGATATTGA
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MTLDPSKRKFLQAAAGTTAGAAALGLFPPSIRRALAIPANRRTGTIKDVEHVVILMQENRSFDHYFGTLVGVRGFGDRFT IPLPGGRSVWQQADQNGQTVLPYHLNQAAGNAQRVDGTPHSWEDARDAWDRGRMAEWPRYKQPQSMGYYTQAEASFQFAL ANAFTVCDAYFCSLHGGTNTNRLFHWTGTNGPTGPAGQVVVDNAWDALYSDTDIRTGGYDWITYPERLQQAGVSWMVYQN MPDNFTDNPLVGFRQYRQANLASGKPVYSDSDANPAYDPARDQAGNPLYKGIANTMPDGGFLGTFRQAVLHGRLPQVSWI IPPATYCEHPGPSSPVQGGWYVQEVLDALTANPEVWSKTVLLINFDENDGYFDHVPPPCAPSLDGRGGTLGKSTLSAGEM AYEYYTHKPYADTGMPPPDGDCYGPGPRVPMWVVSPWSRGGWVNSQNFDHTSVLRFLEARFGVKEPQISPYRRAVFGDLT SAFNFATPNDAPLATLAGRRSKGDADALCDAQGALPQIAVPSPQALPRQATGTRPSRALPYELHVRARTHAAGGTVQLGF SNTGTAAAVFHVYDRLHLDRAPRRYMVEAGKQLHDHWSAGADGGAYDLWVLGPNGFHRSFAGNLAALRGAVPHPEADVCY DIANGNAHLVLMIMNQGSASAALQVKSNAYRGDGPWTTTVAPGQSQELQWDLSGSAHWYDFTLTCDALPGFARRFAGRVE TGRDGLSDPAMGLAG
Sequences:
>Translated_735_residues MTLDPSKRKFLQAAAGTTAGAAALGLFPPSIRRALAIPANRRTGTIKDVEHVVILMQENRSFDHYFGTLVGVRGFGDRFT IPLPGGRSVWQQADQNGQTVLPYHLNQAAGNAQRVDGTPHSWEDARDAWDRGRMAEWPRYKQPQSMGYYTQAEASFQFAL ANAFTVCDAYFCSLHGGTNTNRLFHWTGTNGPTGPAGQVVVDNAWDALYSDTDIRTGGYDWITYPERLQQAGVSWMVYQN MPDNFTDNPLVGFRQYRQANLASGKPVYSDSDANPAYDPARDQAGNPLYKGIANTMPDGGFLGTFRQAVLHGRLPQVSWI IPPATYCEHPGPSSPVQGGWYVQEVLDALTANPEVWSKTVLLINFDENDGYFDHVPPPCAPSLDGRGGTLGKSTLSAGEM AYEYYTHKPYADTGMPPPDGDCYGPGPRVPMWVVSPWSRGGWVNSQNFDHTSVLRFLEARFGVKEPQISPYRRAVFGDLT SAFNFATPNDAPLATLAGRRSKGDADALCDAQGALPQIAVPSPQALPRQATGTRPSRALPYELHVRARTHAAGGTVQLGF SNTGTAAAVFHVYDRLHLDRAPRRYMVEAGKQLHDHWSAGADGGAYDLWVLGPNGFHRSFAGNLAALRGAVPHPEADVCY DIANGNAHLVLMIMNQGSASAALQVKSNAYRGDGPWTTTVAPGQSQELQWDLSGSAHWYDFTLTCDALPGFARRFAGRVE TGRDGLSDPAMGLAG >Mature_734_residues TLDPSKRKFLQAAAGTTAGAAALGLFPPSIRRALAIPANRRTGTIKDVEHVVILMQENRSFDHYFGTLVGVRGFGDRFTI PLPGGRSVWQQADQNGQTVLPYHLNQAAGNAQRVDGTPHSWEDARDAWDRGRMAEWPRYKQPQSMGYYTQAEASFQFALA NAFTVCDAYFCSLHGGTNTNRLFHWTGTNGPTGPAGQVVVDNAWDALYSDTDIRTGGYDWITYPERLQQAGVSWMVYQNM PDNFTDNPLVGFRQYRQANLASGKPVYSDSDANPAYDPARDQAGNPLYKGIANTMPDGGFLGTFRQAVLHGRLPQVSWII PPATYCEHPGPSSPVQGGWYVQEVLDALTANPEVWSKTVLLINFDENDGYFDHVPPPCAPSLDGRGGTLGKSTLSAGEMA YEYYTHKPYADTGMPPPDGDCYGPGPRVPMWVVSPWSRGGWVNSQNFDHTSVLRFLEARFGVKEPQISPYRRAVFGDLTS AFNFATPNDAPLATLAGRRSKGDADALCDAQGALPQIAVPSPQALPRQATGTRPSRALPYELHVRARTHAAGGTVQLGFS NTGTAAAVFHVYDRLHLDRAPRRYMVEAGKQLHDHWSAGADGGAYDLWVLGPNGFHRSFAGNLAALRGAVPHPEADVCYD IANGNAHLVLMIMNQGSASAALQVKSNAYRGDGPWTTTVAPGQSQELQWDLSGSAHWYDFTLTCDALPGFARRFAGRVET GRDGLSDPAMGLAG
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 79929; Mature: 79797
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPSKRKFLQAAAGTTAGAAALGLFPPSIRRALAIPANRRTGTIKDVEHVVILMQENR CCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHEEECCCCCCCCCHHCCEEEEEEEECCC SFDHYFGTLVGVRGFGDRFTIPLPGGRSVWQQADQNGQTVLPYHLNQAAGNAQRVDGTPH CHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCEECCCCCC SWEDARDAWDRGRMAEWPRYKQPQSMGYYTQAEASFQFALANAFTVCDAYFCSLHGGTNT CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHEECCCCCC NRLFHWTGTNGPTGPAGQVVVDNAWDALYSDTDIRTGGYDWITYPERLQQAGVSWMVYQN CEEEEECCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEC MPDNFTDNPLVGFRQYRQANLASGKPVYSDSDANPAYDPARDQAGNPLYKGIANTMPDGG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCC FLGTFRQAVLHGRLPQVSWIIPPATYCEHPGPSSPVQGGWYVQEVLDALTANPEVWSKTV HHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE LLINFDENDGYFDHVPPPCAPSLDGRGGTLGKSTLSAGEMAYEYYTHKPYADTGMPPPDG EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEHHCCCCCCCCCCCCCCC DCYGPGPRVPMWVVSPWSRGGWVNSQNFDHTSVLRFLEARFGVKEPQISPYRRAVFGDLT CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SAFNFATPNDAPLATLAGRRSKGDADALCDAQGALPQIAVPSPQALPRQATGTRPSRALP HHCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC YELHVRARTHAAGGTVQLGFSNTGTAAAVFHVYDRLHLDRAPRRYMVEAGKQLHDHWSAG EEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC ADGGAYDLWVLGPNGFHRSFAGNLAALRGAVPHPEADVCYDIANGNAHLVLMIMNQGSAS CCCCEEEEEEECCCCCCHHHHCCHHHHHCCCCCCCCCEEEEEECCCEEEEEEEEECCCCC AALQVKSNAYRGDGPWTTTVAPGQSQELQWDLSGSAHWYDFTLTCDALPGFARRFAGRVE EEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEEEEECCCCHHHHHHHCCCC TGRDGLSDPAMGLAG CCCCCCCCCCCCCCC >Mature Secondary Structure TLDPSKRKFLQAAAGTTAGAAALGLFPPSIRRALAIPANRRTGTIKDVEHVVILMQENR CCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHEEECCCCCCCCCHHCCEEEEEEEECCC SFDHYFGTLVGVRGFGDRFTIPLPGGRSVWQQADQNGQTVLPYHLNQAAGNAQRVDGTPH CHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCEECCCCCC SWEDARDAWDRGRMAEWPRYKQPQSMGYYTQAEASFQFALANAFTVCDAYFCSLHGGTNT CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHEECCCCCC NRLFHWTGTNGPTGPAGQVVVDNAWDALYSDTDIRTGGYDWITYPERLQQAGVSWMVYQN CEEEEECCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEC MPDNFTDNPLVGFRQYRQANLASGKPVYSDSDANPAYDPARDQAGNPLYKGIANTMPDGG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCC FLGTFRQAVLHGRLPQVSWIIPPATYCEHPGPSSPVQGGWYVQEVLDALTANPEVWSKTV HHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE LLINFDENDGYFDHVPPPCAPSLDGRGGTLGKSTLSAGEMAYEYYTHKPYADTGMPPPDG EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEHHCCCCCCCCCCCCCCC DCYGPGPRVPMWVVSPWSRGGWVNSQNFDHTSVLRFLEARFGVKEPQISPYRRAVFGDLT CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SAFNFATPNDAPLATLAGRRSKGDADALCDAQGALPQIAVPSPQALPRQATGTRPSRALP HHCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC YELHVRARTHAAGGTVQLGFSNTGTAAAVFHVYDRLHLDRAPRRYMVEAGKQLHDHWSAG EEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC ADGGAYDLWVLGPNGFHRSFAGNLAALRGAVPHPEADVCYDIANGNAHLVLMIMNQGSAS CCCCEEEEEEECCCCCCHHHHCCHHHHHCCCCCCCCCEEEEEECCCEEEEEEEEECCCCC AALQVKSNAYRGDGPWTTTVAPGQSQELQWDLSGSAHWYDFTLTCDALPGFARRFAGRVE EEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEEEEECCCCHHHHHHHCCCC TGRDGLSDPAMGLAG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]