Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610065
Identifier: 120610065
GI number: 120610065
Start: 1511737
End: 1512108
Strand: Direct
Name: 120610065
Synonym: Aave_1378
Alternate gene names: NA
Gene position: 1511737-1512108 (Clockwise)
Preceding gene: 120610064
Following gene: 120610067
Centisome position: 28.24
GC content: 73.92
Gene sequence:
>372_bases ATGTCCGATGCGTCCCGTCCCTTCCCCAACCCGTTGCTCCATCCTTCCGAGGCCGAGCCGGGCCTGCCCTGCGCCGAAGC CCTGTTGGCCGGCACCCTGGCCCTCATGACCGGCTACGCCCACAGCGACCGCGCGGGCGACCGGGACGCCATGGGCCGCA AGATCGCCGCCCACCTGGAGAGCCTCGCGCGCATGGACGGGCTGTCCCCGCACTTCCGCACCATGGCGGGCAACTTGAAC AACCGCTGGTCGCGGCGGCTGGGCCTGGCGGTGGCGGCGGGCGAGGGCGAGGGTGCTGCGGCGCCGGCCGGCCCGAGTGC GGCGGAACTGCAGCGGCGGCTGTGGCATACGGCGCCGCAAGCCGTGCAATAG
Upstream 100 bases:
>100_bases CATTCGCATCGCGTCCTTGCCGCCACCAGGGTTTGCGCTGCATTTTGATATTGAGAACCATTCTCATAAAATGCCGGAAA GCAAGCCAGGAGGCCTTTTC
Downstream 100 bases:
>100_bases CCGCAGCCCGGCAGCAGGGCCGTTCGCACGCCGCCCTGCGCGCCTACAGCCGCCCCAGACCGGGTGGCACAGGCGTGCCG TCAGGCAGCGCCCACTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSDASRPFPNPLLHPSEAEPGLPCAEALLAGTLALMTGYAHSDRAGDRDAMGRKIAAHLESLARMDGLSPHFRTMAGNLN NRWSRRLGLAVAAGEGEGAAAPAGPSAAELQRRLWHTAPQAVQ
Sequences:
>Translated_123_residues MSDASRPFPNPLLHPSEAEPGLPCAEALLAGTLALMTGYAHSDRAGDRDAMGRKIAAHLESLARMDGLSPHFRTMAGNLN NRWSRRLGLAVAAGEGEGAAAPAGPSAAELQRRLWHTAPQAVQ >Mature_122_residues SDASRPFPNPLLHPSEAEPGLPCAEALLAGTLALMTGYAHSDRAGDRDAMGRKIAAHLESLARMDGLSPHFRTMAGNLNN RWSRRLGLAVAAGEGEGAAAPAGPSAAELQRRLWHTAPQAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12931; Mature: 12800
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDASRPFPNPLLHPSEAEPGLPCAEALLAGTLALMTGYAHSDRAGDRDAMGRKIAAHLE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH SLARMDGLSPHFRTMAGNLNNRWSRRLGLAVAAGEGEGAAAPAGPSAAELQRRLWHTAPQ HHHHHCCCCHHHHHHHCCCCHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC AVQ CCC >Mature Secondary Structure SDASRPFPNPLLHPSEAEPGLPCAEALLAGTLALMTGYAHSDRAGDRDAMGRKIAAHLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH SLARMDGLSPHFRTMAGNLNNRWSRRLGLAVAAGEGEGAAAPAGPSAAELQRRLWHTAPQ HHHHHCCCCHHHHHHHCCCCHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC AVQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA