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The map label for this gene is trg [H]

Identifier: 120610030

GI number: 120610030

Start: 1470390

End: 1472252

Strand: Direct

Name: trg [H]

Synonym: Aave_1343

Alternate gene names: 120610030

Gene position: 1470390-1472252 (Clockwise)

Preceding gene: 120610029

Following gene: 120610031

Centisome position: 27.47

GC content: 71.23

Gene sequence:

>1863_bases
ATGCGCGCCAGGAGCACCCTTACCGTGAAAGATCTGAAAATCGCCACCCGGCTCGCGCTGGGATTCGCGCTCATCCTGCT
CGTCATGTTCGTGATGAACATGCTGGGCCTGACCAACATGGGGGAGACGGTCCGTTCCGTGAAGGGAGTCGCTTCGGAGT
CGCTCGTCAAGGAACGGCTGATCAGCGACTGGGCCCGCAACATCCATACGAGCGTGCAGCGGACCAAGGCCGTGGCCCGC
AGCAGCGATACCTCCCTGAACGACGCGTTCGCGGAGGAGGCCGCTGCCTCTTCGCGGCAGTCGGCGGACATGCTCAAGCG
CATCGAGGCGCTCCTGCAGGCCGACCAGGAGAAGGCCTTGATGGCCGACATCCAGAAGGCGCGCACGAACTACCTGACAA
GTCGCGATGCGATCTACAAGGCCAAACGCGAGGGGCGGTTGGAAGATGCGCAGCGCCTGTTCACGCAGGAGTTCCAGCCC
ATCACGGCGCAGTTCCTCGAAGCTGTCCAGAAGCTGCTGAACATGCAGCGTGAGAACATCGATGCCTCCCTGGGGCAGGT
GGAATCCGGCTACGCGGAGACCCGCTCCGCCGTGGCGATCGCCACCGTGCTGGCCCTGATCCTGGGCGGGGGGCTGGGCT
GGTGGATCACGCGCGGCATCACGCGACCGCTCGGCGAGGCGGTGCGTGTCGCGCGCGCCGTGGCGGACAACGACCTCACG
AGTGCCATCGCCGCCGGCGGGCGCGACGAGACCGGCCAGGTGCTGGATGCCCTGCGCCAGATGAACGACAACCTGGCCCA
GGTCACGGGCCGCGTGCGCCAGGGGGCCGACAGCATCGCCATCGCCGCGCGGGAAATCGATGCGGGCAACCAGGACCTGT
CCGCGCGGACCGAGCGGCAGGCGAGCGCCCTGCAGCAGACGGCCGCTTCGATCGAGCAGCTCACCAGTGCCGTACGCCAG
AACGCCGACAGCGCCCGGCAGGCCAACCAGCTCGCGGCCCATGCCTCGCAGATGGCGGGCGAGGGCGGGCAGGTGGTGGC
CGGCGTCGTGCAGACCATGGGCGCCATCGACGCTTCCTCGCGCCGCATCGCGGACATCATCGGGGTGATCGACGGCATCG
CTTTCCAGACCAACATCCTGGCGTTGAACGCGGCCGTGGAGGCGGCGCGCGCCGGCGAGCAGGGCCGCGGTTTCGCCGTG
GTGGCGGGGGAAGTCCGTGCGCTCGCGGGGCGCAGCGCCGAGGCCGCCAAGGACATCAAGACGCTGATCGGCGATTCCGT
GGCCAAGGTGGACGAAGGTTCCCAGCAGGTCGCGCAGGCCGGACGCACCATGGAAACGGTGGTGGACAGCATCCGGCGCG
TGGCGGACATCATGGGCGAGATCAGCGCCGCGAGCGCGGAGCAGAGTTCGGGCATCGAGCAGGTCAGCCAGGCGATCGGG
CAGATGGACCAGGTGACGCAGCAGAACGCCGCCCTGGTCGAGGAGGCCGCGGCTGCCGCCGGCTCGCTCAAGACGCAGGC
GGCCATGCTGGCCGAGGTGGTGTCCGCATTCCGGCTGCGCGACGGCAGCGCGGCCGGCATGCCTGCCGCCGCCGCACCCG
TTGCGCCGCCCATCGCCAAAGCGGTGCCGCCCGCCGCCGTTCCTGCCCCCCAGGCGCCCGCGCGGGCTGCCGTGGCCGCG
CCCGTCCGGCCCCGCCCGCCGGCCACCGTCGGGGCCGCCGGCGGGAAGGCGCCTGCGCTGCCCGGCCGCCCTCCGGCGGG
AGCCTCCGCCCCGCCGGCCTCCGCCCCGCCGGCCTCCGCGCCGCGGCCTCCCGCGCCGTCGCGCAAGGCCAGCCAGAGCG
ACGACGACTGGGAAACCTTCTGA

Upstream 100 bases:

>100_bases
AACATGGTGTTTATGCGGAGTGGTGTTTCCGCTTGTATCAATGCACTATCTGCCGGCACGGCCATCGAAGAAGGCGGCTG
CCGGGTCGTGCATTGCCTAG

Downstream 100 bases:

>100_bases
TTCCGCGGGCGCATCCGCCGCCCTCTGGTGTAAACACCGAGCCTCCCGCACGTTGCTTCATGCACGATGGCTTCAGTCGT
CCCGGGCGGGATCCGCCCGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MRARSTLTVKDLKIATRLALGFALILLVMFVMNMLGLTNMGETVRSVKGVASESLVKERLISDWARNIHTSVQRTKAVAR
SSDTSLNDAFAEEAAASSRQSADMLKRIEALLQADQEKALMADIQKARTNYLTSRDAIYKAKREGRLEDAQRLFTQEFQP
ITAQFLEAVQKLLNMQRENIDASLGQVESGYAETRSAVAIATVLALILGGGLGWWITRGITRPLGEAVRVARAVADNDLT
SAIAAGGRDETGQVLDALRQMNDNLAQVTGRVRQGADSIAIAAREIDAGNQDLSARTERQASALQQTAASIEQLTSAVRQ
NADSARQANQLAAHASQMAGEGGQVVAGVVQTMGAIDASSRRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRALAGRSAEAAKDIKTLIGDSVAKVDEGSQQVAQAGRTMETVVDSIRRVADIMGEISAASAEQSSGIEQVSQAIG
QMDQVTQQNAALVEEAAAAAGSLKTQAAMLAEVVSAFRLRDGSAAGMPAAAAPVAPPIAKAVPPAAVPAPQAPARAAVAA
PVRPRPPATVGAAGGKAPALPGRPPAGASAPPASAPPASAPRPPAPSRKASQSDDDWETF

Sequences:

>Translated_620_residues
MRARSTLTVKDLKIATRLALGFALILLVMFVMNMLGLTNMGETVRSVKGVASESLVKERLISDWARNIHTSVQRTKAVAR
SSDTSLNDAFAEEAAASSRQSADMLKRIEALLQADQEKALMADIQKARTNYLTSRDAIYKAKREGRLEDAQRLFTQEFQP
ITAQFLEAVQKLLNMQRENIDASLGQVESGYAETRSAVAIATVLALILGGGLGWWITRGITRPLGEAVRVARAVADNDLT
SAIAAGGRDETGQVLDALRQMNDNLAQVTGRVRQGADSIAIAAREIDAGNQDLSARTERQASALQQTAASIEQLTSAVRQ
NADSARQANQLAAHASQMAGEGGQVVAGVVQTMGAIDASSRRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRALAGRSAEAAKDIKTLIGDSVAKVDEGSQQVAQAGRTMETVVDSIRRVADIMGEISAASAEQSSGIEQVSQAIG
QMDQVTQQNAALVEEAAAAAGSLKTQAAMLAEVVSAFRLRDGSAAGMPAAAAPVAPPIAKAVPPAAVPAPQAPARAAVAA
PVRPRPPATVGAAGGKAPALPGRPPAGASAPPASAPPASAPRPPAPSRKASQSDDDWETF
>Mature_620_residues
MRARSTLTVKDLKIATRLALGFALILLVMFVMNMLGLTNMGETVRSVKGVASESLVKERLISDWARNIHTSVQRTKAVAR
SSDTSLNDAFAEEAAASSRQSADMLKRIEALLQADQEKALMADIQKARTNYLTSRDAIYKAKREGRLEDAQRLFTQEFQP
ITAQFLEAVQKLLNMQRENIDASLGQVESGYAETRSAVAIATVLALILGGGLGWWITRGITRPLGEAVRVARAVADNDLT
SAIAAGGRDETGQVLDALRQMNDNLAQVTGRVRQGADSIAIAAREIDAGNQDLSARTERQASALQQTAASIEQLTSAVRQ
NADSARQANQLAAHASQMAGEGGQVVAGVVQTMGAIDASSRRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRALAGRSAEAAKDIKTLIGDSVAKVDEGSQQVAQAGRTMETVVDSIRRVADIMGEISAASAEQSSGIEQVSQAIG
QMDQVTQQNAALVEEAAAAAGSLKTQAAMLAEVVSAFRLRDGSAAGMPAAAAPVAPPIAKAVPPAAVPAPQAPARAAVAA
PVRPRPPATVGAAGGKAPALPGRPPAGASAPPASAPPASAPRPPAPSRKASQSDDDWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=425, Percent_Identity=48.4705882352941, Blast_Score=337, Evalue=2e-93,
Organism=Escherichia coli, GI1788195, Length=356, Percent_Identity=54.2134831460674, Blast_Score=323, Evalue=2e-89,
Organism=Escherichia coli, GI1788194, Length=342, Percent_Identity=51.7543859649123, Blast_Score=305, Evalue=7e-84,
Organism=Escherichia coli, GI2367378, Length=361, Percent_Identity=54.2936288088643, Blast_Score=303, Evalue=2e-83,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=40.3669724770642, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 64395; Mature: 64395

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS00287 CYSTATIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARSTLTVKDLKIATRLALGFALILLVMFVMNMLGLTNMGETVRSVKGVASESLVKERL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ISDWARNIHTSVQRTKAVARSSDTSLNDAFAEEAAASSRQSADMLKRIEALLQADQEKAL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MADIQKARTNYLTSRDAIYKAKREGRLEDAQRLFTQEFQPITAQFLEAVQKLLNMQRENI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DASLGQVESGYAETRSAVAIATVLALILGGGLGWWITRGITRPLGEAVRVARAVADNDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SAIAAGGRDETGQVLDALRQMNDNLAQVTGRVRQGADSIAIAAREIDAGNQDLSARTERQ
HHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHH
ASALQQTAASIEQLTSAVRQNADSARQANQLAAHASQMAGEGGQVVAGVVQTMGAIDASS
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH
RRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAGRSAEAAKDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCHHHHHHHH
TLIGDSVAKVDEGSQQVAQAGRTMETVVDSIRRVADIMGEISAASAEQSSGIEQVSQAIG
HHHCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
QMDQVTQQNAALVEEAAAAAGSLKTQAAMLAEVVSAFRLRDGSAAGMPAAAAPVAPPIAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
AVPPAAVPAPQAPARAAVAAPVRPRPPATVGAAGGKAPALPGRPPAGASAPPASAPPASA
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRPPAPSRKASQSDDDWETF
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRARSTLTVKDLKIATRLALGFALILLVMFVMNMLGLTNMGETVRSVKGVASESLVKERL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ISDWARNIHTSVQRTKAVARSSDTSLNDAFAEEAAASSRQSADMLKRIEALLQADQEKAL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MADIQKARTNYLTSRDAIYKAKREGRLEDAQRLFTQEFQPITAQFLEAVQKLLNMQRENI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DASLGQVESGYAETRSAVAIATVLALILGGGLGWWITRGITRPLGEAVRVARAVADNDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SAIAAGGRDETGQVLDALRQMNDNLAQVTGRVRQGADSIAIAAREIDAGNQDLSARTERQ
HHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHH
ASALQQTAASIEQLTSAVRQNADSARQANQLAAHASQMAGEGGQVVAGVVQTMGAIDASS
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH
RRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAGRSAEAAKDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCHHHHHHHH
TLIGDSVAKVDEGSQQVAQAGRTMETVVDSIRRVADIMGEISAASAEQSSGIEQVSQAIG
HHHCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
QMDQVTQQNAALVEEAAAAAGSLKTQAAMLAEVVSAFRLRDGSAAGMPAAAAPVAPPIAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
AVPPAAVPAPQAPARAAVAAPVRPRPPATVGAAGGKAPALPGRPPAGASAPPASAPPASA
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRPPAPSRKASQSDDDWETF
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]