Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 120610031

GI number: 120610031

Start: 1472371

End: 1473981

Strand: Direct

Name: tse [H]

Synonym: Aave_1344

Alternate gene names: 120610031

Gene position: 1472371-1473981 (Clockwise)

Preceding gene: 120610030

Following gene: 120610034

Centisome position: 27.51

GC content: 72.19

Gene sequence:

>1611_bases
ATGCACCGATCATTGGGTGTCGTCCACAAGCTCTGGATCACGGTGACCGTGCTGGTGCTCATGCTGTCCGCGGTGCTCGG
CGTGGCCGGCGCGCACTACCAGCGCGAGCAGGCCCAGGCCGATGCCGCGCGCGACGAAATGGAGCAGCGCACCCAGGCGG
CCCTGCGCTGGGCTGGCCTGACGGAGACCAATGCGGCCCGCACCCTGGCGGTGGCTCTCGCCGCCGATCCCCTGCTGGAG
GCGCAATTCAAGGAGCCGATCGCGGCCACTTCCGCGCGCATTTCGGAAACCCAGAAGACCCTCGCCGCCATGGACCTGTC
CGCGCAGGACAAGGCCCGCATGGCGAAGATCGCCGCCGCGCGCCAGGCCACGCTGGATCTGCGCGGCGAGGCCAGCCGGC
TGTCGGCCGCCGGCAGGCGGGACGAGGCGCGGGCCCTGGTGCTGCAGCGCTATCAACCGGCGGTGGCGGCCTACCTGCAG
CTCCTGCGGGATTTCGCGCAGTCGCAGACCGAGGCCGCCGATGCGCTGCGCGACCGCACGGCCGCATCGCTGCAGCGCAT
CCTGCTGGGTGCGGCCGTTGCGCTGGCGCTGCTGCTGGCAGGTATCGTGGCCGGCGGCGTGGTGCTGATCCGCGGCATCC
AGAGACCGCTGGCGGAAGCCAATGCGGCAGCGGCGCGCATCGCCGCCGGGGATCTCGCCTCGCCCGTGCCGCGGGGCGGC
GGCGACGAGTTCGGCGAACTGCTGCGATCGCTCGGTGCCATGGGCGATGCGCTCTCCGGCGTGGTGCAGCAGGTGCGCCG
GAGTACGGACAGCATCGCCATCGCCAGCGCCGAAATCGCCACGGGCAACCATGACCTGTCCGTGCGCACCGAGCAGACCT
CCAGCAGCCTGCAGGAGACGGCAGCGGCCATGGAGCAGTTCACCAGCACCCTGCAGCAGAGCGCGGGCAGCGCGCAGCAG
GCCAGCGGGCTGGCGGCCAGTGCCCGCAGCGTGGCGCAGCGCGGCGGCGAGGTGGTCACCCAGGTGGTATCCACCATGGA
TGACATCCACCAGAGCAGCCGCCGCATCGCCGAGATCATCGGCGTGATCGACGGCATCGCCTTCCAGACCAACATCCTGG
CCCTGAACGCGGCCGTGGAAGCCGCCCGCGCGGGTGAGCAGGGCCGGGGCTTCGCCGTGGTGGCGGGCGAGGTGCGCGCT
CTGGCGCAGCGCAGCGCCACCGCCGCGCGGGAGATCAAGCAACTGATCGGGACCTCGGTGGAGCGGGTGGAGGCCGGCAG
CCGGCTGGTGCAGGATGCCGGCGCCACCATGCAGGACATCGTGCGCTCGGTGCAGCACGTGAACGACATGATCGGCGAGA
TCACCGCCGCGGCTTCCGAGCAGAGCGCGGGCATCGGTCAGGTGAACGCATCCGTGGGACGGCTGGACCAGATGACGCAG
CAGAACGCCGCGTTGGTGGAGGAAAGCGCCGCCGCGGCCCAGAGCCTGCGCGAGCAGGCCGAACAACTGGCGCGCACGGT
GTCGGTGTTCAAGCTGCGCGCCCTGCCGGGGGCTGCCGGCGCGGCGCTGCAGCAGCCCGTGCGGGGCGGGCCGCGCACGC
TGGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCCCTCTGGTGTAAACACCGAGCCTCCCGCACGTTGCTTCATGCACGATGGCTTCAGTCGTCCCGGGCGGGATCCGCCC
GGCAAGGAAAGGAGTCCGCC

Downstream 100 bases:

>100_bases
TCCGGGCCGCGGCCGGAACTCTGTCTCAGGGCCGCGTCGGGGCGCCCACCATCTCGGCGGCGAAACGCTCCGACGGCTGC
GCGATCTGCTCGCGGCAGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MHRSLGVVHKLWITVTVLVLMLSAVLGVAGAHYQREQAQADAARDEMEQRTQAALRWAGLTETNAARTLAVALAADPLLE
AQFKEPIAATSARISETQKTLAAMDLSAQDKARMAKIAAARQATLDLRGEASRLSAAGRRDEARALVLQRYQPAVAAYLQ
LLRDFAQSQTEAADALRDRTAASLQRILLGAAVALALLLAGIVAGGVVLIRGIQRPLAEANAAAARIAAGDLASPVPRGG
GDEFGELLRSLGAMGDALSGVVQQVRRSTDSIAIASAEIATGNHDLSVRTEQTSSSLQETAAAMEQFTSTLQQSAGSAQQ
ASGLAASARSVAQRGGEVVTQVVSTMDDIHQSSRRIAEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRA
LAQRSATAAREIKQLIGTSVERVEAGSRLVQDAGATMQDIVRSVQHVNDMIGEITAAASEQSAGIGQVNASVGRLDQMTQ
QNAALVEESAAAAQSLREQAEQLARTVSVFKLRALPGAAGAALQQPVRGGPRTLAA

Sequences:

>Translated_536_residues
MHRSLGVVHKLWITVTVLVLMLSAVLGVAGAHYQREQAQADAARDEMEQRTQAALRWAGLTETNAARTLAVALAADPLLE
AQFKEPIAATSARISETQKTLAAMDLSAQDKARMAKIAAARQATLDLRGEASRLSAAGRRDEARALVLQRYQPAVAAYLQ
LLRDFAQSQTEAADALRDRTAASLQRILLGAAVALALLLAGIVAGGVVLIRGIQRPLAEANAAAARIAAGDLASPVPRGG
GDEFGELLRSLGAMGDALSGVVQQVRRSTDSIAIASAEIATGNHDLSVRTEQTSSSLQETAAAMEQFTSTLQQSAGSAQQ
ASGLAASARSVAQRGGEVVTQVVSTMDDIHQSSRRIAEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRA
LAQRSATAAREIKQLIGTSVERVEAGSRLVQDAGATMQDIVRSVQHVNDMIGEITAAASEQSAGIGQVNASVGRLDQMTQ
QNAALVEESAAAAQSLREQAEQLARTVSVFKLRALPGAAGAALQQPVRGGPRTLAA
>Mature_536_residues
MHRSLGVVHKLWITVTVLVLMLSAVLGVAGAHYQREQAQADAARDEMEQRTQAALRWAGLTETNAARTLAVALAADPLLE
AQFKEPIAATSARISETQKTLAAMDLSAQDKARMAKIAAARQATLDLRGEASRLSAAGRRDEARALVLQRYQPAVAAYLQ
LLRDFAQSQTEAADALRDRTAASLQRILLGAAVALALLLAGIVAGGVVLIRGIQRPLAEANAAAARIAAGDLASPVPRGG
GDEFGELLRSLGAMGDALSGVVQQVRRSTDSIAIASAEIATGNHDLSVRTEQTSSSLQETAAAMEQFTSTLQQSAGSAQQ
ASGLAASARSVAQRGGEVVTQVVSTMDDIHQSSRRIAEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRA
LAQRSATAAREIKQLIGTSVERVEAGSRLVQDAGATMQDIVRSVQHVNDMIGEITAAASEQSAGIGQVNASVGRLDQMTQ
QNAALVEESAAAAQSLREQAEQLARTVSVFKLRALPGAAGAALQQPVRGGPRTLAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=352, Percent_Identity=50.8522727272727, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=57.6051779935275, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI2367378, Length=413, Percent_Identity=48.910411622276, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI1787690, Length=346, Percent_Identity=49.1329479768786, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1789453, Length=344, Percent_Identity=40.406976744186, Blast_Score=227, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55735; Mature: 55735

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSLGVVHKLWITVTVLVLMLSAVLGVAGAHYQREQAQADAARDEMEQRTQAALRWAGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TETNAARTLAVALAADPLLEAQFKEPIAATSARISETQKTLAAMDLSAQDKARMAKIAAA
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RQATLDLRGEASRLSAAGRRDEARALVLQRYQPAVAAYLQLLRDFAQSQTEAADALRDRT
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASLQRILLGAAVALALLLAGIVAGGVVLIRGIQRPLAEANAAAARIAAGDLASPVPRGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GDEFGELLRSLGAMGDALSGVVQQVRRSTDSIAIASAEIATGNHDLSVRTEQTSSSLQET
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHEECCCCCCEEEEHHHHHHHHHH
AAAMEQFTSTLQQSAGSAQQASGLAASARSVAQRGGEVVTQVVSTMDDIHQSSRRIAEII
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSATAAREIKQLIGTSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHH
ERVEAGSRLVQDAGATMQDIVRSVQHVNDMIGEITAAASEQSAGIGQVNASVGRLDQMTQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHH
QNAALVEESAAAAQSLREQAEQLARTVSVFKLRALPGAAGAALQQPVRGGPRTLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHRSLGVVHKLWITVTVLVLMLSAVLGVAGAHYQREQAQADAARDEMEQRTQAALRWAGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TETNAARTLAVALAADPLLEAQFKEPIAATSARISETQKTLAAMDLSAQDKARMAKIAAA
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RQATLDLRGEASRLSAAGRRDEARALVLQRYQPAVAAYLQLLRDFAQSQTEAADALRDRT
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASLQRILLGAAVALALLLAGIVAGGVVLIRGIQRPLAEANAAAARIAAGDLASPVPRGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GDEFGELLRSLGAMGDALSGVVQQVRRSTDSIAIASAEIATGNHDLSVRTEQTSSSLQET
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHEECCCCCCEEEEHHHHHHHHHH
AAAMEQFTSTLQQSAGSAQQASGLAASARSVAQRGGEVVTQVVSTMDDIHQSSRRIAEII
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSATAAREIKQLIGTSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHH
ERVEAGSRLVQDAGATMQDIVRSVQHVNDMIGEITAAASEQSAGIGQVNASVGRLDQMTQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHH
QNAALVEESAAAAQSLREQAEQLARTVSVFKLRALPGAAGAALQQPVRGGPRTLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]