Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is ycfJ [C]

Identifier: 120610017

GI number: 120610017

Start: 1456206

End: 1456763

Strand: Direct

Name: ycfJ [C]

Synonym: Aave_1330

Alternate gene names: 120610017

Gene position: 1456206-1456763 (Clockwise)

Preceding gene: 120610016

Following gene: 120610019

Centisome position: 27.2

GC content: 70.07

Gene sequence:

>558_bases
ATGCTCCAATGGGTTGACCGGCGGGGCCCGAGCCTTGTCCATTTCCGCAAGAAGGAGTCGAACATGCTGAAGTTTTCCCG
CACCACCGCTGCGATCGCCACCGTGGCCCTCGCCGGCGTCCTGGGCGCCTGCGCCGAGCAGCCGCGCTACGGTTCGCAGT
ATCCCGGCCAGCCCACCTATTCGAGCTATCCGTCTTCCGCGCCGGCCGGCATGGAATACGGCACGGTGACCAACATCGAG
ATGCTGCAGGGCCGCAGCGGCAACAGCGGTGTGGGCGTCGGCACCGTGGCCGGCGCCGTGATCGGCGGCGTGCTGGGCAA
CCAGGTGGGCAAGGGCACCGGCCGTGCGGCCGCCACCGTGCTGGGCGCCGTCGGCGGCGGCGTGGTGGGCAACCAGATCG
AGAACCGCAACGGCAGCAATGACGGCCGCGCCGATGGCTACCGCATCACGGTGCAGCTCGACCAGGGCGGCCAGCGTGCC
TACGATGTGAGTTCCCCCGGCGACCTGCGTCCCGGCGACCGCGTGCGCCTGAACGGCGGCCAGATCTCCCGCATGTGA

Upstream 100 bases:

>100_bases
ACGGCTCCACGGGCAAGGTGTAGGTATCGTCCTATCCGTCCGGGGCGATGGTGCCTACGGCGGCCGCGGCCATCTCCCGT
CGCGTACCGCGGCCGGCCCC

Downstream 100 bases:

>100_bases
TCACGGCGCAGCGCCTGGCGGTATCGCCGTGGCCTCCAGGAAAAAGGACCCGAGGGGTCCTTTTTTTTCGGCCGTGCTCT
CTGCCGGGCAGCCGGCGTTG

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: 17 Kda Surface Antigen

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLQWVDRRGPSLVHFRKKESNMLKFSRTTAAIATVALAGVLGACAEQPRYGSQYPGQPTYSSYPSSAPAGMEYGTVTNIE
MLQGRSGNSGVGVGTVAGAVIGGVLGNQVGKGTGRAAATVLGAVGGGVVGNQIENRNGSNDGRADGYRITVQLDQGGQRA
YDVSSPGDLRPGDRVRLNGGQISRM

Sequences:

>Translated_185_residues
MLQWVDRRGPSLVHFRKKESNMLKFSRTTAAIATVALAGVLGACAEQPRYGSQYPGQPTYSSYPSSAPAGMEYGTVTNIE
MLQGRSGNSGVGVGTVAGAVIGGVLGNQVGKGTGRAAATVLGAVGGGVVGNQIENRNGSNDGRADGYRITVQLDQGGQRA
YDVSSPGDLRPGDRVRLNGGQISRM
>Mature_185_residues
MLQWVDRRGPSLVHFRKKESNMLKFSRTTAAIATVALAGVLGACAEQPRYGSQYPGQPTYSSYPSSAPAGMEYGTVTNIE
MLQGRSGNSGVGVGTVAGAVIGGVLGNQVGKGTGRAAATVLGAVGGGVVGNQIENRNGSNDGRADGYRITVQLDQGGQRA
YDVSSPGDLRPGDRVRLNGGQISRM

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19087; Mature: 19087

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQWVDRRGPSLVHFRKKESNMLKFSRTTAAIATVALAGVLGACAEQPRYGSQYPGQPTY
CCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSYPSSAPAGMEYGTVTNIEMLQGRSGNSGVGVGTVAGAVIGGVLGNQVGKGTGRAAATV
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LGAVGGGVVGNQIENRNGSNDGRADGYRITVQLDQGGQRAYDVSSPGDLRPGDRVRLNGG
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEECCC
QISRM
EECCC
>Mature Secondary Structure
MLQWVDRRGPSLVHFRKKESNMLKFSRTTAAIATVALAGVLGACAEQPRYGSQYPGQPTY
CCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSYPSSAPAGMEYGTVTNIEMLQGRSGNSGVGVGTVAGAVIGGVLGNQVGKGTGRAAATV
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LGAVGGGVVGNQIENRNGSNDGRADGYRITVQLDQGGQRAYDVSSPGDLRPGDRVRLNGG
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEECCC
QISRM
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA