Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is dut [H]
Identifier: 120610016
GI number: 120610016
Start: 1455682
End: 1456128
Strand: Direct
Name: dut [H]
Synonym: Aave_1329
Alternate gene names: 120610016
Gene position: 1455682-1456128 (Clockwise)
Preceding gene: 120610015
Following gene: 120610017
Centisome position: 27.19
GC content: 67.11
Gene sequence:
>447_bases GTGAAAATCGACGTCAAGATCCTCGACGCGCGCATGGCGGAGCAGTTGCCCGCCTACGCCACGCCCGGCAGCGCCGGCCT CGACCTGCGGGCCTGCCTGGACGCCCCCCTGACCCTGCAGCCCAATGCCTGGCAACTCGTACCCACAGGCATCGCCATCT ACCTGAAGGATCCCGGCTACGCCGCGCTGATCCTGCCGCGCTCGGGCCTGGGCCACAAGCACGGCATCGTGCTCGGCAAC CTGGTCGGCCTCATCGACAGCGACTACCAGGGGCAGTTGATGGTCAGCGCCTGGAACCGCAGCGACATTGCCTTCACCCT GCAGCCGATGGAGCGTCTGGCCCAGCTCGTGATCGTGCCGGTGGTGCAGGCGCAGTTCCATGTGGTGCAGGAGTTTCCGG CCACGGCGCGTGGTGAGAACGGTTACGGCTCCACGGGCAAGGTGTAG
Upstream 100 bases:
>100_bases GCCCGCCGGCTGGTCACCGCCTGAAGCGCAGTCCCGGAGCACCCCCGGAGGCTGGCGCTCCAGGAGTGTTGCGCCCCTGC ATCATCCATTGAAAGCATTT
Downstream 100 bases:
>100_bases GTATCGTCCTATCCGTCCGGGGCGATGGTGCCTACGGCGGCCGCGGCCATCTCCCGTCGCGTACCGCGGCCGGCCCCATG CTCCAATGGGTTGACCGGCG
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKIDVKILDARMAEQLPAYATPGSAGLDLRACLDAPLTLQPNAWQLVPTGIAIYLKDPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMVSAWNRSDIAFTLQPMERLAQLVIVPVVQAQFHVVQEFPATARGENGYGSTGKV
Sequences:
>Translated_148_residues MKIDVKILDARMAEQLPAYATPGSAGLDLRACLDAPLTLQPNAWQLVPTGIAIYLKDPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMVSAWNRSDIAFTLQPMERLAQLVIVPVVQAQFHVVQEFPATARGENGYGSTGKV >Mature_148_residues MKIDVKILDARMAEQLPAYATPGSAGLDLRACLDAPLTLQPNAWQLVPTGIAIYLKDPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMVSAWNRSDIAFTLQPMERLAQLVIVPVVQAQFHVVQEFPATARGENGYGSTGKV
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=140, Percent_Identity=35.7142857142857, Blast_Score=74, Evalue=5e-14, Organism=Homo sapiens, GI4503423, Length=140, Percent_Identity=35.7142857142857, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI70906441, Length=140, Percent_Identity=35.7142857142857, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=65.5405405405405, Blast_Score=204, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71988561, Length=133, Percent_Identity=37.593984962406, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6319729, Length=133, Percent_Identity=35.3383458646617, Blast_Score=72, Evalue=5e-14, Organism=Drosophila melanogaster, GI24583610, Length=149, Percent_Identity=34.2281879194631, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI19921126, Length=149, Percent_Identity=34.2281879194631, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15906; Mature: 15906
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDVKILDARMAEQLPAYATPGSAGLDLRACLDAPLTLQPNAWQLVPTGIAIYLKDPGY CEEEEEEECHHHHHHCCCCCCCCCCCCEEHHHCCCCEEECCCCEEEEECCEEEEEECCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDIAFTLQPMERLAQLVIVP EEEEEECCCCCCCCCEEEEHEEECCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH VVQAQFHVVQEFPATARGENGYGSTGKV HHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIDVKILDARMAEQLPAYATPGSAGLDLRACLDAPLTLQPNAWQLVPTGIAIYLKDPGY CEEEEEEECHHHHHHCCCCCCCCCCCCEEHHHCCCCEEECCCCEEEEECCEEEEEECCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDIAFTLQPMERLAQLVIVP EEEEEECCCCCCCCCEEEEHEEECCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH VVQAQFHVVQEFPATARGENGYGSTGKV HHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA