Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is coaBC [H]
Identifier: 120610015
GI number: 120610015
Start: 1454388
End: 1455605
Strand: Direct
Name: coaBC [H]
Synonym: Aave_1328
Alternate gene names: 120610015
Gene position: 1454388-1455605 (Clockwise)
Preceding gene: 120610006
Following gene: 120610016
Centisome position: 27.17
GC content: 72.58
Gene sequence:
>1218_bases ATGAACGAACTGGCGGGCAAACACATTCTCCTGGGCCTTTCGGGCGGCGTCGCCTGCTACAAGTCGGCCGAGCTGGCGCG CCTGCTCGCCAAGGCCGGCGCCACCGTGCAGGTGGTCATGACCGAGGCGGCCGAGCGGTTCATCACGCCCGTCACCATGC AGGCGCTCACGGGCCGCGCGGTCTATACCTCGCAGTGGGACGCGCGCGAGCCCAACAACATGCCGCACATCAACCTGGGC CGCGAGGCGGATGCGATCCTGATCGCCCCCTGCAGCGCCGATTTCGTCGCCCGGCTGGCGCAGGGCCGGTCCGACGAACT GCTCAGCCTGCTGTGCCTCGCACGGCCCGCGCAGCGCGTGCCCCTGCTGCTCGCGCCCGCGATGAACCGCGAGATGTGGG CGCACCCCGCCACGCAGCGCAACCTGGCGCAGGTGGCTGCCGACGGCGCCGTGGTGCTGGGCGTGGGCACGGGCGATCAG GCCTGCGGCGAAACGGGCGACGGCCGCATGCTGGAGCCCGCGGAATTGCTGGAAGAGCTGACGGCCTTCTTCGCGCCCAG GCTGCTCGCCGGGCACCGCGTACTGGTCACGGCCGGCCCGACCTTCGAGGCGATCGACCCGGTGCGCGGCATCACCAACC TCTCGAGCGGCAAGATGGGGTTCGCCATCGCGCGTGCGGCCCGGGAGGCGGGAGCGGAGGTCCACCTCGTCGCCGGTCCC GTGCACCTGCCCACGCCGCGTGGCGTGCGCCGCGTGGACGTGCGCTCGGCGCGGGACATGCTGCAGGCCTGCACCGCGCT CGCCCCGCAGGCATCCATCTTCGTGGCGACCGCGGCCGTGGCGGACTGGCGCCCGGCGGAAGCCGCCACGCGCAAGATCA AGAAGGACGGCTCGGGAGCCGTCCCGGCGCTCGCCTTCGTGGAGAATCCCGACATCCTGGCGACCATCGCGGCCTCCGAA CGTGCGCGCGAGGGGGCGCTGTACTGCGTGGGCTTCGCGGCCGAGAGCGACCACCTGCTGGAGCACGCCACGGCCAAGCG CGCGCGCAAGGGCGTGCCCCTGCTGGTCGGCAACATCGGTCCCGAGACCTTCGGGCAGGACGACAATGCCCTGCTGCTGG TGGACGCCGAAGGCCACCGCACGCTGCCGCGTGCCACCAAGCGCGAACTGGCGCAGCAGCTCGTGGCGGACATCGCCCGC CGGCTGGTCACCGCCTGA
Upstream 100 bases:
>100_bases GTGGTGGGAAATCGGGATTATAGAGGCCGGCCCATCCGCGCCCGGCCGACCGGCGCCTTCCCCCTGCACCGTGGCAGGGC GTCTGCTAAATTGCTCGCCC
Downstream 100 bases:
>100_bases AGCGCAGTCCCGGAGCACCCCCGGAGGCTGGCGCTCCAGGAGTGTTGCGCCCCTGCATCATCCATTGAAAGCATTTGTGA AAATCGACGTCAAGATCCTC
Product: phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MNELAGKHILLGLSGGVACYKSAELARLLAKAGATVQVVMTEAAERFITPVTMQALTGRAVYTSQWDAREPNNMPHINLG READAILIAPCSADFVARLAQGRSDELLSLLCLARPAQRVPLLLAPAMNREMWAHPATQRNLAQVAADGAVVLGVGTGDQ ACGETGDGRMLEPAELLEELTAFFAPRLLAGHRVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGAEVHLVAGP VHLPTPRGVRRVDVRSARDMLQACTALAPQASIFVATAAVADWRPAEAATRKIKKDGSGAVPALAFVENPDILATIAASE RAREGALYCVGFAAESDHLLEHATAKRARKGVPLLVGNIGPETFGQDDNALLLVDAEGHRTLPRATKRELAQQLVADIAR RLVTA
Sequences:
>Translated_405_residues MNELAGKHILLGLSGGVACYKSAELARLLAKAGATVQVVMTEAAERFITPVTMQALTGRAVYTSQWDAREPNNMPHINLG READAILIAPCSADFVARLAQGRSDELLSLLCLARPAQRVPLLLAPAMNREMWAHPATQRNLAQVAADGAVVLGVGTGDQ ACGETGDGRMLEPAELLEELTAFFAPRLLAGHRVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGAEVHLVAGP VHLPTPRGVRRVDVRSARDMLQACTALAPQASIFVATAAVADWRPAEAATRKIKKDGSGAVPALAFVENPDILATIAASE RAREGALYCVGFAAESDHLLEHATAKRARKGVPLLVGNIGPETFGQDDNALLLVDAEGHRTLPRATKRELAQQLVADIAR RLVTA >Mature_405_residues MNELAGKHILLGLSGGVACYKSAELARLLAKAGATVQVVMTEAAERFITPVTMQALTGRAVYTSQWDAREPNNMPHINLG READAILIAPCSADFVARLAQGRSDELLSLLCLARPAQRVPLLLAPAMNREMWAHPATQRNLAQVAADGAVVLGVGTGDQ ACGETGDGRMLEPAELLEELTAFFAPRLLAGHRVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGAEVHLVAGP VHLPTPRGVRRVDVRSARDMLQACTALAPQASIFVATAAVADWRPAEAATRKIKKDGSGAVPALAFVENPDILATIAASE RAREGALYCVGFAAESDHLLEHATAKRARKGVPLLVGNIGPETFGQDDNALLLVDAEGHRTLPRATKRELAQQLVADIAR RLVTA
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=176, Percent_Identity=35.7954545454545, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI87082301, Length=403, Percent_Identity=46.6501240694789, Blast_Score=310, Evalue=1e-85, Organism=Saccharomyces cerevisiae, GI6322762, Length=187, Percent_Identity=29.9465240641711, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24657262, Length=190, Percent_Identity=30.5263157894737, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 42770; Mature: 42770
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELAGKHILLGLSGGVACYKSAELARLLAKAGATVQVVMTEAAERFITPVTMQALTGRA CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCHHHHHHHCCCE VYTSQWDAREPNNMPHINLGREADAILIAPCSADFVARLAQGRSDELLSLLCLARPAQRV EEECCCCCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCHHHC PLLLAPAMNREMWAHPATQRNLAQVAADGAVVLGVGTGDQACGETGDGRMLEPAELLEEL CEEEECCCCCHHHCCCCHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCEECHHHHHHHH TAFFAPRLLAGHRVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGAEVHLVAGP HHHHHHHHHCCCEEEEEECCCCHHHCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECC VHLPTPRGVRRVDVRSARDMLQACTALAPQASIFVATAAVADWRPAEAATRKIKKDGSGA EECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHCCCCCC VPALAFVENPDILATIAASERAREGALYCVGFAAESDHLLEHATAKRARKGVPLLVGNIG CCEEEEECCCCEEEEEEHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCC PETFGQDDNALLLVDAEGHRTLPRATKRELAQQLVADIARRLVTA CHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNELAGKHILLGLSGGVACYKSAELARLLAKAGATVQVVMTEAAERFITPVTMQALTGRA CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCHHHHHHHCCCE VYTSQWDAREPNNMPHINLGREADAILIAPCSADFVARLAQGRSDELLSLLCLARPAQRV EEECCCCCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCHHHC PLLLAPAMNREMWAHPATQRNLAQVAADGAVVLGVGTGDQACGETGDGRMLEPAELLEEL CEEEECCCCCHHHCCCCHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCEECHHHHHHHH TAFFAPRLLAGHRVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGAEVHLVAGP HHHHHHHHHCCCEEEEEECCCCHHHCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECC VHLPTPRGVRRVDVRSARDMLQACTALAPQASIFVATAAVADWRPAEAATRKIKKDGSGA EECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHCCCCCC VPALAFVENPDILATIAASERAREGALYCVGFAAESDHLLEHATAKRARKGVPLLVGNIG CCEEEEECCCCEEEEEEHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCC PETFGQDDNALLLVDAEGHRTLPRATKRELAQQLVADIARRLVTA CHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]