Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is pyrG
Identifier: 120610014
GI number: 120610014
Start: 1452597
End: 1454276
Strand: Reverse
Name: pyrG
Synonym: Aave_1327
Alternate gene names: 120610014
Gene position: 1454276-1452597 (Counterclockwise)
Preceding gene: 120610018
Following gene: 120610013
Centisome position: 27.17
GC content: 66.07
Gene sequence:
>1680_bases ATGACCAAATTTGTCTTCGTCACCGGCGGTGTGGTGTCTTCCCTGGGCAAGGGAATCGCCTCAGCCTCCCTTGCTGCGAT CCTCGAATCGCGCGGCCTCAAAGTCACCCTCATCAAGCTCGACCCGTACATCAACGTGGACCCGGGCACCATGTCCCCGT TCCAGCACGGCGAAGTGTTCGTCACCGACGACGGCGCCGAGACCGACCTCGACCTCGGCCACTATGAGCGTTTCATCGAA ACGCGCATGAAGAAGACCAACAACTTCACCACGGGCCGCATCTACCAGTCCGTGCTGGAGAAGGAGCGCCGCGGCGACTA CCTGGGCAAGACGGTGCAGGTGATCCCGCACGTCACCAACGAGATCCAGGAATACGTCAAGCGCGGCGCGGGCATCGGCA CCGGCGACGCGGTGGACGTGGCCATCGTCGAGATCGGCGGCACGGTGGGCGATATCGAATCCCTGCCCTTCCTCGAAGCC GTGCGCCAGATGAGCCTGCGCATGGGGCCGAACAATTCCGCGTTCGTTCACCTCACCTACCTGCCCTACATCGCGGCGGC CGGTGAACTCAAGACCAAGCCCACCCAGCACACGGTGCAGAAGCTGCGCGAGATCGGCATCCAGCCCGACGCCCTGCTCT GCCGTGCAGACCGCCGCATCCCCGACGAGGAGCGCGGCAAGATCTCCCTGTTCACCAACGTGGCCGAGTGGGGCGTGATC AGCATGTGGGACGTGGACACCATCTACAAGGTGCCCCGCATGCTGCACGAGCAGGGCCTGGACGGCCTGATCTGCGACAA GCTGCGCCTGAACACGCCGCCCACCAGCCTCAAGCGCTGGGACCAGCTCGTGTACGAGACCGAACATCCGCAGGGCGAGG TCACCATCGCCATGGTGGGCAAGTACGTCGATCTGTCCGACAGCTACAAGTCGGTGAACGAGGCACTGCGCCACGCCGGC ATGAAGAACCACGTGCGCGTGAAGATCGAGCACGTCGATTCCGAGACCATCGCACCGGGCGATGCGGCCGAGAAGCTCGC CAAGTACGACGCCATCCTGGTGCCCGGCGGCTTCGGCGCGCGCGGCGTGGAAGGCAAGATCTGCACGGCGCGCTACGCCC GCGAGCAGAGGGTGCCCTACCTCGGCATCTGCCTGGGCATGCAGGTGGCCACCATCGAATACGCGCGCCACGTGGCGGGC CTGGCGAACGCCAACAGCACCGAGTTCGACGCCGCCACGCCGCACCCCGTGATCGCGCTGATCACCGAATGGAAGGACGC CGACGGCACCATCCAGACGCGCAGCGAAACCTCCGACCTGGGCGGCACCATGCGCCTGGGCGCGCAGAGCTCCGACGTCG CCTCCGGCACGCTGGCGCACGAGATCTACGGCAACATCGTCACCGAGCGCCACCGCCACCGGTACGAGGCGAACGTGAAC TACCTCGACCGGCTCCGCAAGGCGGGCCTCGTGATCTCCGCGCTCACGCAGCGCGAGCAGCTCACCGAGATCGTCGAGCT GCCGCGCGAGGTGCATCCGTGGTTCATCGGCGTGCAGTTCCACCCCGAGTTCAAGTCCACCCCGTGGGACGGCCATCCGC TCTTCAACGCCTTCATCAAGGCGGCGATCGACCACCAGAAGAGCCGCCAGCCCACCCTGCCCGCCGCCGCTGCCTCCTGA
Upstream 100 bases:
>100_bases TTAGCAGACGCCCTGCCACGGTGCAGGGGGAAGGCGCCGGTCGGCCGGGCGCGGATGGGCCGGCCTCTATAATCCCGATT TCCCACCACCATAAAAAGAC
Downstream 100 bases:
>100_bases GGCGTCGGCGCTTTCCCCCCAAGGCACCTTCCATGAAACTCTGCGGCTTCGACGTCGGCCTCGACCGGCCCTTCTTCCTC ATCGCGGGTCCCTGCGTCAT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIE TRMKKTNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEYVKRGAGIGTGDAVDVAIVEIGGTVGDIESLPFLEA VRQMSLRMGPNNSAFVHLTYLPYIAAAGELKTKPTQHTVQKLREIGIQPDALLCRADRRIPDEERGKISLFTNVAEWGVI SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPTSLKRWDQLVYETEHPQGEVTIAMVGKYVDLSDSYKSVNEALRHAG MKNHVRVKIEHVDSETIAPGDAAEKLAKYDAILVPGGFGARGVEGKICTARYAREQRVPYLGICLGMQVATIEYARHVAG LANANSTEFDAATPHPVIALITEWKDADGTIQTRSETSDLGGTMRLGAQSSDVASGTLAHEIYGNIVTERHRHRYEANVN YLDRLRKAGLVISALTQREQLTEIVELPREVHPWFIGVQFHPEFKSTPWDGHPLFNAFIKAAIDHQKSRQPTLPAAAAS
Sequences:
>Translated_559_residues MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIE TRMKKTNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEYVKRGAGIGTGDAVDVAIVEIGGTVGDIESLPFLEA VRQMSLRMGPNNSAFVHLTYLPYIAAAGELKTKPTQHTVQKLREIGIQPDALLCRADRRIPDEERGKISLFTNVAEWGVI SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPTSLKRWDQLVYETEHPQGEVTIAMVGKYVDLSDSYKSVNEALRHAG MKNHVRVKIEHVDSETIAPGDAAEKLAKYDAILVPGGFGARGVEGKICTARYAREQRVPYLGICLGMQVATIEYARHVAG LANANSTEFDAATPHPVIALITEWKDADGTIQTRSETSDLGGTMRLGAQSSDVASGTLAHEIYGNIVTERHRHRYEANVN YLDRLRKAGLVISALTQREQLTEIVELPREVHPWFIGVQFHPEFKSTPWDGHPLFNAFIKAAIDHQKSRQPTLPAAAAS >Mature_558_residues TKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIET RMKKTNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEYVKRGAGIGTGDAVDVAIVEIGGTVGDIESLPFLEAV RQMSLRMGPNNSAFVHLTYLPYIAAAGELKTKPTQHTVQKLREIGIQPDALLCRADRRIPDEERGKISLFTNVAEWGVIS MWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPTSLKRWDQLVYETEHPQGEVTIAMVGKYVDLSDSYKSVNEALRHAGM KNHVRVKIEHVDSETIAPGDAAEKLAKYDAILVPGGFGARGVEGKICTARYAREQRVPYLGICLGMQVATIEYARHVAGL ANANSTEFDAATPHPVIALITEWKDADGTIQTRSETSDLGGTMRLGAQSSDVASGTLAHEIYGNIVTERHRHRYEANVNY LDRLRKAGLVISALTQREQLTEIVELPREVHPWFIGVQFHPEFKSTPWDGHPLFNAFIKAAIDHQKSRQPTLPAAAAS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=560, Percent_Identity=43.9285714285714, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=559, Percent_Identity=42.397137745975, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI28559083, Length=559, Percent_Identity=42.397137745975, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI221316689, Length=559, Percent_Identity=42.397137745975, Blast_Score=459, Evalue=1e-129, Organism=Escherichia coli, GI1789142, Length=549, Percent_Identity=62.1129326047359, Blast_Score=692, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=623, Percent_Identity=39.1653290529695, Blast_Score=429, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322563, Length=572, Percent_Identity=41.4335664335664, Blast_Score=439, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=40.7017543859649, Blast_Score=432, Evalue=1e-122, Organism=Drosophila melanogaster, GI24664469, Length=561, Percent_Identity=43.49376114082, Blast_Score=459, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357815, Length=506, Percent_Identity=42.0948616600791, Blast_Score=388, Evalue=1e-108,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_ACIAC (A1TLT0)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969692.1 - ProteinModelPortal: A1TLT0 - STRING: A1TLT0 - GeneID: 4666167 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1327 - NMPDR: fig|397945.5.peg.1168 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - PhylomeDB: A1TLT0 - ProtClustDB: PRK05380 - BioCyc: AAVE397945:AAVE_1327-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 61718; Mature: 61587
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 384-384 ACT_SITE 521-521 ACT_SITE 523-523
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFIETRMKKTNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQEYVKRGAGIGTGDAVDVAIVEIGGTVGDIESLPFLEAVRQMSLRMGPNNSAFVHLTY HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE LPYIAAAGELKTKPTQHTVQKLREIGIQPDALLCRADRRIPDEERGKISLFTNVAEWGVI HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHCCEE SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPTSLKRWDQLVYETEHPQGEVTIAMVG EEECHHHHHHHHHHHHHCCCCCEEECCEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEC KYVDLSDSYKSVNEALRHAGMKNHVRVKIEHVDSETIAPGDAAEKLAKYDAILVPGGFGA CEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCEEEECCCCCC RGVEGKICTARYAREQRVPYLGICLGMQVATIEYARHVAGLANANSTEFDAATPHPVIAL CCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE ITEWKDADGTIQTRSETSDLGGTMRLGAQSSDVASGTLAHEIYGNIVTERHRHRYEANVN EEECCCCCCCEEECCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH YLDRLRKAGLVISALTQREQLTEIVELPREVHPWFIGVQFHPEFKSTPWDGHPLFNAFIK HHHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHH AAIDHQKSRQPTLPAAAAS HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFIETRMKKTNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQEYVKRGAGIGTGDAVDVAIVEIGGTVGDIESLPFLEAVRQMSLRMGPNNSAFVHLTY HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE LPYIAAAGELKTKPTQHTVQKLREIGIQPDALLCRADRRIPDEERGKISLFTNVAEWGVI HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHCCEE SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPTSLKRWDQLVYETEHPQGEVTIAMVG EEECHHHHHHHHHHHHHCCCCCEEECCEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEC KYVDLSDSYKSVNEALRHAGMKNHVRVKIEHVDSETIAPGDAAEKLAKYDAILVPGGFGA CEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCEEEECCCCCC RGVEGKICTARYAREQRVPYLGICLGMQVATIEYARHVAGLANANSTEFDAATPHPVIAL CCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE ITEWKDADGTIQTRSETSDLGGTMRLGAQSSDVASGTLAHEIYGNIVTERHRHRYEANVN EEECCCCCCCEEECCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH YLDRLRKAGLVISALTQREQLTEIVELPREVHPWFIGVQFHPEFKSTPWDGHPLFNAFIK HHHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHH AAIDHQKSRQPTLPAAAAS HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA