Click here to switch to the map view.

The map label for this gene is yuxH [H]

Identifier: 120610002

GI number: 120610002

Start: 1442339

End: 1443688

Strand: Reverse

Name: yuxH [H]

Synonym: Aave_1315

Alternate gene names: 120610002

Gene position: 1443688-1442339 (Counterclockwise)

Preceding gene: 120610003

Following gene: 120609996

Centisome position: 26.97

GC content: 66.59

Gene sequence:

>1350_bases
ATGGTAAGGTGGCGACCTGCCAAGGGCCCACCCGCCCGGTCATCCATTCTCCTCACGCCCATGTCGAGCAATAACGAAAA
CGCACCCGCTTTCGAGTCCACCCAGCCCCAGGAAGGCGCGGCGATGGACGAGGCCAACCTCGCCATCATCGCGCGCCAGG
CCATCGTGGACGAGCACCGCGCCGTCTTCGGCTACGAGCTCTTCGACCGCTCCACCGCCTCCGACGCGCACACGGCCGCC
AGCGATGCCGCCCTGCTCTTCAATGCGCTCTCATACGCGGGCACCGAGGCCCTGGTGGGCAAGAAGACGGTGTTCATCAA
CTGCACCCATGAGAGCCTCGCGGGCGGCCACCTGGAGCTCATCCATCCCGAGAAGGTCGTGCTGGAGGTTCCCACGCTGC
CGGACACGGCCGGCGTGGAGGAGATCGAAGGCCGCCTGTCCACCCTCGAAGGGCTGCGGGCCCGGGGCTTTCGCCTCGCC
TTCAACCAGAACGTGCTGCGCCGCAACTACGGCAGCTGGCTGCGGATGGCCGCTTTCGTGAAGCTCGACATGCAGGCCTT
CCGGCCCGAACTGGCCGAGCCGCTCGTGAAGTTCGCACGTGCCAACAGCCAAGCCACGCTGGTCGCCGAGAAAGTGGAAA
CCGCCGAGCAGCACGAGCGCATGGCCGCGCTGGGCGTGAAGCTGTTCCAGGGTTTCTGGTTCGCCAAGCCCGCACTCGTC
AAGGCCCAGACCATACGGCCGTCGCAGGCCACGATCATCCAGCTCATCAACCTGGTGCGCAAACAGGCGAGCACCGCGGA
AATCGAAGACCTGCTCAAGAAGGACCCCACGCTGTCCTTCAACCTGCTGCGCTTCATCAACTCCTCCGGCTTCGGACTGT
CCTGCGAGATCACCTCGTTCCGGCATGCGGTCATGATCCTCGGCCTCAAGAAGCTCTTCCGCTGGGCGGCGCTGCTGATG
ACCACTTCGCGCGCGGGCGGCTCGCCGCCGGCCGTGGGCCAGACGGCCGTCGTGCGCGGGCGCCTGATGGAACTGCTGGC
CGCCGAACTGCTGCCACCCGAAGAGTGCGACAACGCCTTCGTGGTGGGCGTGTTCTCGCTGCTGGACACCATGCTCGGCG
TGCCGCTGGAAAAGGCCCTCGAATCGGTGGCCCTGCCGCAGCCGGTGATCGATGCGCTGCTGCACAACACCGGCGTGTTC
GCGCCGTTCCTCGACCTCACCAAGGCCTGCGAAAGCGGTGACGAAGTGGCGTTCGCCAAGGCCGCCGAGGCGCTGCACCT
CTCGAACCGTCAGGTCAACTGGGCCCACCTGCAGGCCCTGACCTGGGCCGAAAGCCTGGGCGAAGGCTGA

Upstream 100 bases:

>100_bases
CGGACTGAGCCGATGCCCCCGCGCCAGCGCGCCATGCCGTTCCGCCCATGCCCTCGCGCATGCCGGCCGGCCGGAAGCAG
GCTTGCAGGCGCTTTCCTTG

Downstream 100 bases:

>100_bases
CCCGGCGCGGTCCTGGAGCGGCCATCGCGACCCAGCGAAGCGGTTGCGGCGAGGCGCCGCGTCGCAGGCAGTACACGTAG
TACGACAAGATGCGGCAGCG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MVRWRPAKGPPARSSILLTPMSSNNENAPAFESTQPQEGAAMDEANLAIIARQAIVDEHRAVFGYELFDRSTASDAHTAA
SDAALLFNALSYAGTEALVGKKTVFINCTHESLAGGHLELIHPEKVVLEVPTLPDTAGVEEIEGRLSTLEGLRARGFRLA
FNQNVLRRNYGSWLRMAAFVKLDMQAFRPELAEPLVKFARANSQATLVAEKVETAEQHERMAALGVKLFQGFWFAKPALV
KAQTIRPSQATIIQLINLVRKQASTAEIEDLLKKDPTLSFNLLRFINSSGFGLSCEITSFRHAVMILGLKKLFRWAALLM
TTSRAGGSPPAVGQTAVVRGRLMELLAAELLPPEECDNAFVVGVFSLLDTMLGVPLEKALESVALPQPVIDALLHNTGVF
APFLDLTKACESGDEVAFAKAAEALHLSNRQVNWAHLQALTWAESLGEG

Sequences:

>Translated_449_residues
MVRWRPAKGPPARSSILLTPMSSNNENAPAFESTQPQEGAAMDEANLAIIARQAIVDEHRAVFGYELFDRSTASDAHTAA
SDAALLFNALSYAGTEALVGKKTVFINCTHESLAGGHLELIHPEKVVLEVPTLPDTAGVEEIEGRLSTLEGLRARGFRLA
FNQNVLRRNYGSWLRMAAFVKLDMQAFRPELAEPLVKFARANSQATLVAEKVETAEQHERMAALGVKLFQGFWFAKPALV
KAQTIRPSQATIIQLINLVRKQASTAEIEDLLKKDPTLSFNLLRFINSSGFGLSCEITSFRHAVMILGLKKLFRWAALLM
TTSRAGGSPPAVGQTAVVRGRLMELLAAELLPPEECDNAFVVGVFSLLDTMLGVPLEKALESVALPQPVIDALLHNTGVF
APFLDLTKACESGDEVAFAKAAEALHLSNRQVNWAHLQALTWAESLGEG
>Mature_449_residues
MVRWRPAKGPPARSSILLTPMSSNNENAPAFESTQPQEGAAMDEANLAIIARQAIVDEHRAVFGYELFDRSTASDAHTAA
SDAALLFNALSYAGTEALVGKKTVFINCTHESLAGGHLELIHPEKVVLEVPTLPDTAGVEEIEGRLSTLEGLRARGFRLA
FNQNVLRRNYGSWLRMAAFVKLDMQAFRPELAEPLVKFARANSQATLVAEKVETAEQHERMAALGVKLFQGFWFAKPALV
KAQTIRPSQATIIQLINLVRKQASTAEIEDLLKKDPTLSFNLLRFINSSGFGLSCEITSFRHAVMILGLKKLFRWAALLM
TTSRAGGSPPAVGQTAVVRGRLMELLAAELLPPEECDNAFVVGVFSLLDTMLGVPLEKALESVALPQPVIDALLHNTGVF
APFLDLTKACESGDEVAFAKAAEALHLSNRQVNWAHLQALTWAESLGEG

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 48832; Mature: 48832

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRWRPAKGPPARSSILLTPMSSNNENAPAFESTQPQEGAAMDEANLAIIARQAIVDEHR
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AVFGYELFDRSTASDAHTAASDAALLFNALSYAGTEALVGKKTVFINCTHESLAGGHLEL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECHHHHCCCCEEE
IHPEKVVLEVPTLPDTAGVEEIEGRLSTLEGLRARGFRLAFNQNVLRRNYGSWLRMAAFV
ECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
KLDMQAFRPELAEPLVKFARANSQATLVAEKVETAEQHERMAALGVKLFQGFWFAKPALV
HHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE
KAQTIRPSQATIIQLINLVRKQASTAEIEDLLKKDPTLSFNLLRFINSSGFGLSCEITSF
EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHH
RHAVMILGLKKLFRWAALLMTTSRAGGSPPAVGQTAVVRGRLMELLAAELLPPEECDNAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHH
VVGVFSLLDTMLGVPLEKALESVALPQPVIDALLHNTGVFAPFLDLTKACESGDEVAFAK
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
AAEALHLSNRQVNWAHLQALTWAESLGEG
HHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRWRPAKGPPARSSILLTPMSSNNENAPAFESTQPQEGAAMDEANLAIIARQAIVDEHR
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AVFGYELFDRSTASDAHTAASDAALLFNALSYAGTEALVGKKTVFINCTHESLAGGHLEL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECHHHHCCCCEEE
IHPEKVVLEVPTLPDTAGVEEIEGRLSTLEGLRARGFRLAFNQNVLRRNYGSWLRMAAFV
ECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
KLDMQAFRPELAEPLVKFARANSQATLVAEKVETAEQHERMAALGVKLFQGFWFAKPALV
HHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE
KAQTIRPSQATIIQLINLVRKQASTAEIEDLLKKDPTLSFNLLRFINSSGFGLSCEITSF
EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHH
RHAVMILGLKKLFRWAALLMTTSRAGGSPPAVGQTAVVRGRLMELLAAELLPPEECDNAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHH
VVGVFSLLDTMLGVPLEKALESVALPQPVIDALLHNTGVFAPFLDLTKACESGDEVAFAK
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
AAEALHLSNRQVNWAHLQALTWAESLGEG
HHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]