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The map label for this gene is nuoJ [H]

Identifier: 120609959

GI number: 120609959

Start: 1396393

End: 1397061

Strand: Direct

Name: nuoJ [H]

Synonym: Aave_1272

Alternate gene names: 120609959

Gene position: 1396393-1397061 (Clockwise)

Preceding gene: 120609958

Following gene: 120609960

Centisome position: 26.09

GC content: 65.77

Gene sequence:

>669_bases
ATGGACGCCAAGACTGGTTTCTTCTATCTGTTCTCGGTCGTGCTGCTGTATGCGGCCTTCCGGGTCATCACCGCGCGCAA
CCCCGTGCATGCGGTGCTCCACCTGATCCTCGCGTTCTCGCAGGCCGCCGCCATCTGGCTGCTGCTGAAGGCCGAGTTCC
TGGCCATCGCGCTCTTGCTGGTCTATCTGGGCGCCGTGATGGTGCTGTTCCTGTTCGTGGTGATGATGCTGGACATCCAC
ATCGACACCGTGCGGCAGGGTTTCTGGCGGCACTTCCCGCTCGCGGCCTTCATCGGCGCGCTGATCGCGCTGGAAATGGC
GGCGGTGCTGATGGGCGGCTTCCGCGGCATGGATGAACCCAAGGCCGTGGCGGCCATGGTGGACGCGGCCGGCAACGTGG
TGCAGTACTCCAACACCAAGGCGCTGGGCAAGCTGCTCTACACCGAATACCTGTACCCGGTGGAAATCGCCGCGGTGATC
CTGCTGGTGGCGATGATCGCCGCCATCGCCCTGACGCTGCGCCAGCGCAAGGACACCAAGGTGACCAAGGTCTCGGAGCA
GGTGCGCGTGCGCGCCGCCGACCGCGTCGAACTGGTGAAGGTCGCCGCGACGCAGAAGCCCGCGGAAGAAGCGGCGGCCC
CCGCAGCCGCCGAGGAGAAGAAGGCATGA

Upstream 100 bases:

>100_bases
TCGGCGACCGCTACGAGGCCGAGATCGCCGCTGCCAAGGCGGCCGACGCCAAGTACCGCTGACCAGCGGCTCCTGAACCA
CTTTTCACAAGATCCGATTC

Downstream 100 bases:

>100_bases
CGTTGACCCTGGGCCATTTCCTGTCGCTGGGCGCGATGCTGTTCGCGCTGTCGGTGATCGGCATCTTCCTGAACCGCAAG
AACCTCATCGTGCTGCTCAT

Product: NADH-ubiquinone/plastoquinone oxidoreductase subunit 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALLLVYLGAVMVLFLFVVMMLDIH
IDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEPKAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVI
LLVAMIAAIALTLRQRKDTKVTKVSEQVRVRAADRVELVKVAATQKPAEEAAAPAAAEEKKA

Sequences:

>Translated_222_residues
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALLLVYLGAVMVLFLFVVMMLDIH
IDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEPKAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVI
LLVAMIAAIALTLRQRKDTKVTKVSEQVRVRAADRVELVKVAATQKPAEEAAAPAAAEEKKA
>Mature_222_residues
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALLLVYLGAVMVLFLFVVMMLDIH
IDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEPKAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVI
LLVAMIAAIALTLRQRKDTKVTKVSEQVRVRAADRVELVKVAATQKPAEEAAAPAAAEEKKA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=191, Percent_Identity=30.3664921465969, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 24206; Mature: 24206

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALLL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYLGAVMVLFLFVVMMLDIHIDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
KAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRQRKDTK
HHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VTKVSEQVRVRAADRVELVKVAATQKPAEEAAAPAAAEEKKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHCCCC
>Mature Secondary Structure
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALLL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYLGAVMVLFLFVVMMLDIHIDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
KAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRQRKDTK
HHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VTKVSEQVRVRAADRVELVKVAATQKPAEEAAAPAAAEEKKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]